Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87200754

Identifier: 87200754

GI number: 87200754

Start: 2967125

End: 2967811

Strand: Direct

Name: 87200754

Synonym: Saro_2741

Alternate gene names: NA

Gene position: 2967125-2967811 (Clockwise)

Preceding gene: 87200753

Following gene: 87200755

Centisome position: 83.31

GC content: 64.05

Gene sequence:

>687_bases
ATGCGCGTCTTTCCAACCTATGCCTTCGCCTTCTCCGACATGGAGGCCGACATCGAGCGGCGGACCATTTCCGGCGGAAC
AGCCCTGTCTGGCGCGGAAGACATCATCGGCGCCGACGGAGGCGGTCACGTCTTTGCCCAGTTCGGCGAGCCGTATCTCG
ATGAAACGGAACTTGCACTGGCCTGGAAGGCTTGTGCGGATACCCTTCAGGGTGGTGTCACGCCCGTCATCGTCCCGCTC
GGCGACCTACGTCACCAGTTCGGTCGCGCTATCCGCGTTCCCCGCTCGCTGCCATGGTGGAGCGAAGCTGAATACCTGAC
GGGGGACAGTGGCGTCGCGCTGGCCGCCGATGCCGCGCTCCGCGCCAAGACCCTCAGCCTGACGCTCGAATTTCTTCCCG
CTCCGCTGCGCGCCGGCATGTGGCTGTCGATCGCGCACCCCACGATGAGCCATCGCGCCTATCGAATTGCCGAGGTCGTG
AGTCAGACCGGAACTGCGGCGACGATCACGCTATCCCACCCGCTTCGGGAGGCAACGACCACCGGCACGACCGTTGAATT
TCACGATCCGCGCTGCGTCATGCGTCTCGATGGTGAAATGCGCTCCCCTTCCAACATGGGCTATGCCGCCGGGTCCGCGA
TCCGGTTCGTCGAGCATTTCCCGGCAACCGGTGGTGGTTACACATGA

Upstream 100 bases:

>100_bases
TGGCGGCAACGGCGCAGACGGCTTGGTCATAGTCTTCAACTACTTCTGAGATTGACGGCGGTAACGGGAACCAAGGTGAA
GCCATAGCCAACGAGACGCC

Downstream 100 bases:

>100_bases
TCTCGCCAGGCAATTATCCTTGGACCGTTTACCGGTGGCAGCCCGCCAAACTGACGATTGATTTTGTCGGCCAGGACTTC
ACCGGTCAGACCTTCAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRVFPTYAFAFSDMEADIERRTISGGTALSGAEDIIGADGGGHVFAQFGEPYLDETELALAWKACADTLQGGVTPVIVPL
GDLRHQFGRAIRVPRSLPWWSEAEYLTGDSGVALAADAALRAKTLSLTLEFLPAPLRAGMWLSIAHPTMSHRAYRIAEVV
SQTGTAATITLSHPLREATTTGTTVEFHDPRCVMRLDGEMRSPSNMGYAAGSAIRFVEHFPATGGGYT

Sequences:

>Translated_228_residues
MRVFPTYAFAFSDMEADIERRTISGGTALSGAEDIIGADGGGHVFAQFGEPYLDETELALAWKACADTLQGGVTPVIVPL
GDLRHQFGRAIRVPRSLPWWSEAEYLTGDSGVALAADAALRAKTLSLTLEFLPAPLRAGMWLSIAHPTMSHRAYRIAEVV
SQTGTAATITLSHPLREATTTGTTVEFHDPRCVMRLDGEMRSPSNMGYAAGSAIRFVEHFPATGGGYT
>Mature_228_residues
MRVFPTYAFAFSDMEADIERRTISGGTALSGAEDIIGADGGGHVFAQFGEPYLDETELALAWKACADTLQGGVTPVIVPL
GDLRHQFGRAIRVPRSLPWWSEAEYLTGDSGVALAADAALRAKTLSLTLEFLPAPLRAGMWLSIAHPTMSHRAYRIAEVV
SQTGTAATITLSHPLREATTTGTTVEFHDPRCVMRLDGEMRSPSNMGYAAGSAIRFVEHFPATGGGYT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24459; Mature: 24459

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFPTYAFAFSDMEADIERRTISGGTALSGAEDIIGADGGGHVFAQFGEPYLDETELAL
CCCCCCHHEEECCHHHHHHHEEECCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCHHHHH
AWKACADTLQGGVTPVIVPLGDLRHQFGRAIRVPRSLPWWSEAEYLTGDSGVALAADAAL
HHHHHHHHHHCCCCEEEEECHHHHHHHHHEEECCCCCCCCCCCCEEECCCCEEEEECHHH
RAKTLSLTLEFLPAPLRAGMWLSIAHPTMSHRAYRIAEVVSQTGTAATITLSHPLREATT
HHHEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCC
TGTTVEFHDPRCVMRLDGEMRSPSNMGYAAGSAIRFVEHFPATGGGYT
CCCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRVFPTYAFAFSDMEADIERRTISGGTALSGAEDIIGADGGGHVFAQFGEPYLDETELAL
CCCCCCHHEEECCHHHHHHHEEECCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCHHHHH
AWKACADTLQGGVTPVIVPLGDLRHQFGRAIRVPRSLPWWSEAEYLTGDSGVALAADAAL
HHHHHHHHHHCCCCEEEEECHHHHHHHHHEEECCCCCCCCCCCCEEECCCCEEEEECHHH
RAKTLSLTLEFLPAPLRAGMWLSIAHPTMSHRAYRIAEVVSQTGTAATITLSHPLREATT
HHHEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCC
TGTTVEFHDPRCVMRLDGEMRSPSNMGYAAGSAIRFVEHFPATGGGYT
CCCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA