| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200754
Identifier: 87200754
GI number: 87200754
Start: 2967125
End: 2967811
Strand: Direct
Name: 87200754
Synonym: Saro_2741
Alternate gene names: NA
Gene position: 2967125-2967811 (Clockwise)
Preceding gene: 87200753
Following gene: 87200755
Centisome position: 83.31
GC content: 64.05
Gene sequence:
>687_bases ATGCGCGTCTTTCCAACCTATGCCTTCGCCTTCTCCGACATGGAGGCCGACATCGAGCGGCGGACCATTTCCGGCGGAAC AGCCCTGTCTGGCGCGGAAGACATCATCGGCGCCGACGGAGGCGGTCACGTCTTTGCCCAGTTCGGCGAGCCGTATCTCG ATGAAACGGAACTTGCACTGGCCTGGAAGGCTTGTGCGGATACCCTTCAGGGTGGTGTCACGCCCGTCATCGTCCCGCTC GGCGACCTACGTCACCAGTTCGGTCGCGCTATCCGCGTTCCCCGCTCGCTGCCATGGTGGAGCGAAGCTGAATACCTGAC GGGGGACAGTGGCGTCGCGCTGGCCGCCGATGCCGCGCTCCGCGCCAAGACCCTCAGCCTGACGCTCGAATTTCTTCCCG CTCCGCTGCGCGCCGGCATGTGGCTGTCGATCGCGCACCCCACGATGAGCCATCGCGCCTATCGAATTGCCGAGGTCGTG AGTCAGACCGGAACTGCGGCGACGATCACGCTATCCCACCCGCTTCGGGAGGCAACGACCACCGGCACGACCGTTGAATT TCACGATCCGCGCTGCGTCATGCGTCTCGATGGTGAAATGCGCTCCCCTTCCAACATGGGCTATGCCGCCGGGTCCGCGA TCCGGTTCGTCGAGCATTTCCCGGCAACCGGTGGTGGTTACACATGA
Upstream 100 bases:
>100_bases TGGCGGCAACGGCGCAGACGGCTTGGTCATAGTCTTCAACTACTTCTGAGATTGACGGCGGTAACGGGAACCAAGGTGAA GCCATAGCCAACGAGACGCC
Downstream 100 bases:
>100_bases TCTCGCCAGGCAATTATCCTTGGACCGTTTACCGGTGGCAGCCCGCCAAACTGACGATTGATTTTGTCGGCCAGGACTTC ACCGGTCAGACCTTCAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MRVFPTYAFAFSDMEADIERRTISGGTALSGAEDIIGADGGGHVFAQFGEPYLDETELALAWKACADTLQGGVTPVIVPL GDLRHQFGRAIRVPRSLPWWSEAEYLTGDSGVALAADAALRAKTLSLTLEFLPAPLRAGMWLSIAHPTMSHRAYRIAEVV SQTGTAATITLSHPLREATTTGTTVEFHDPRCVMRLDGEMRSPSNMGYAAGSAIRFVEHFPATGGGYT
Sequences:
>Translated_228_residues MRVFPTYAFAFSDMEADIERRTISGGTALSGAEDIIGADGGGHVFAQFGEPYLDETELALAWKACADTLQGGVTPVIVPL GDLRHQFGRAIRVPRSLPWWSEAEYLTGDSGVALAADAALRAKTLSLTLEFLPAPLRAGMWLSIAHPTMSHRAYRIAEVV SQTGTAATITLSHPLREATTTGTTVEFHDPRCVMRLDGEMRSPSNMGYAAGSAIRFVEHFPATGGGYT >Mature_228_residues MRVFPTYAFAFSDMEADIERRTISGGTALSGAEDIIGADGGGHVFAQFGEPYLDETELALAWKACADTLQGGVTPVIVPL GDLRHQFGRAIRVPRSLPWWSEAEYLTGDSGVALAADAALRAKTLSLTLEFLPAPLRAGMWLSIAHPTMSHRAYRIAEVV SQTGTAATITLSHPLREATTTGTTVEFHDPRCVMRLDGEMRSPSNMGYAAGSAIRFVEHFPATGGGYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24459; Mature: 24459
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFPTYAFAFSDMEADIERRTISGGTALSGAEDIIGADGGGHVFAQFGEPYLDETELAL CCCCCCHHEEECCHHHHHHHEEECCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCHHHHH AWKACADTLQGGVTPVIVPLGDLRHQFGRAIRVPRSLPWWSEAEYLTGDSGVALAADAAL HHHHHHHHHHCCCCEEEEECHHHHHHHHHEEECCCCCCCCCCCCEEECCCCEEEEECHHH RAKTLSLTLEFLPAPLRAGMWLSIAHPTMSHRAYRIAEVVSQTGTAATITLSHPLREATT HHHEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCC TGTTVEFHDPRCVMRLDGEMRSPSNMGYAAGSAIRFVEHFPATGGGYT CCCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRVFPTYAFAFSDMEADIERRTISGGTALSGAEDIIGADGGGHVFAQFGEPYLDETELAL CCCCCCHHEEECCHHHHHHHEEECCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCHHHHH AWKACADTLQGGVTPVIVPLGDLRHQFGRAIRVPRSLPWWSEAEYLTGDSGVALAADAAL HHHHHHHHHHCCCCEEEEECHHHHHHHHHEEECCCCCCCCCCCCEEECCCCEEEEECHHH RAKTLSLTLEFLPAPLRAGMWLSIAHPTMSHRAYRIAEVVSQTGTAATITLSHPLREATT HHHEEEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCC TGTTVEFHDPRCVMRLDGEMRSPSNMGYAAGSAIRFVEHFPATGGGYT CCCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA