| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200752
Identifier: 87200752
GI number: 87200752
Start: 2963955
End: 2965928
Strand: Direct
Name: 87200752
Synonym: Saro_2739
Alternate gene names: NA
Gene position: 2963955-2965928 (Clockwise)
Preceding gene: 87200751
Following gene: 87200753
Centisome position: 83.22
GC content: 64.08
Gene sequence:
>1974_bases GTGGGTAAACTGCTGGGCTCCATATTGCTGATCGGCGCGGCGCTGGCTGTAAATTTCATCCCGGGTGTCGGACAGGCACT CAGCGGTGCGCTCGGCGGCGTCATTGCAGGCACGGGTGTCTACGCCACTACGGCGTTTTCGATCGCATCGACCCTCGTAT CCGGCCTGACGCTGGGCGTGACTGCGTTGGGTTTGCAATCCCTTGGCGGCATTCTCGGCTCAGGCGGGATCAAATCCGAA ACCCTCGAATCCGCCAAGAAACAACCTCGTCCAGAGCGCGTGTCGGCCTATGGCCGCCTCCGACTCTACGGCGCGTGGAT CGTCTACGAGACGGCCTCGGAAAGCAGCGTCGTTTCCGGCGGAGGCGTCGGCACTGCCGTCGACATCTTCGCCATCCACG ACGGCGAAATGGACGGTCTGGAACAGCGCTATCTCAACGACGACAAGGTCTACCTGTCCGGCGATTTCGTGACGCCGGGT TCTGACGGGCGATACGGAGACCTCAAGGTCAGCTTCTACCACACGACCGGTACCATCCCCGGCACGGGCGGGACGAACGA CCCCGCAAAGCGCCTTCTCGGACCGTCGGTCTGGACCGAAGATCACCGTGGCGACGGTGTTGTCCTCGTTTTTCTGTTCT GCGCTCCGGTCTCGAAGAAGTTCCAGGAGATCTACCCGCAGGGCATTGCACCGATCCCGTCGCTGGTCGCGCGCTGGCAG GCTTGCCCAGATCCAGCGGCTGTCGATCCCCTTGACGAGGGCAGCTGGACGTGGACCGAGAACCCGGTGCGTCAGCTTCT GCACTACATGCTGGTACGCGAAGGTCCGCGCCCTGCCCTGCCACGCAGCCACGTCGACTATGCCACGGAACTCGCGGCGC TGCGCACTGCCTGGTGGAACCGCTACATTGCACCGACGCTGAACTACTGGACCGACGCCGCCGCCGTTTGCGATGAGGCT CGCTCGCTCAAGGCGGGCGGATCGGAAGCAAAGTATCGGTGCTGTCTCGCCCACAAGCACACGGATTCACCGGAGGAGGT CAAGAGCGCCTTCCTGACTGCGTTCGATGGCTGGATGGCACCGCGCGCGGACGGGGCGTACGTGATCTATGCCGGCAAGA GTTACACGCCGACGGTCAGCATCGGACCGGACGAGATCGTCTCCTATACGTGGGACGGCGGCGGCGTCGACGACGACGAG GCGGTCAACGAGCTGGTGTGCACCTATGTCTCGTCGCTCCACGACTATAACACCGTCCAGTGCGACCCGTGGCGTGACGA CGGCGACATCACCGCGCGCGGCCGGATACTGTCCTCGAACTTCGATCCCAACGTGCCCAGCCATGCCCAGAGCCGCTATC TGGCGAAGCGCAAGATGGCGCGCCAGAACGCGATCAATCGCGGAACCGTGACGACCAACATTGCCGGTCGCGCCGCGCGC GGCGAACGCTACATCAACCTGCGCATCGAGGAGGCCGGGGCGGTTTTCTTTGATGGCGTGGCTGAAATCACGGGCCTGTC GCGTTCGCTGACGGGGGGCGTGACGTTCCAGTGGGTCGAGTTCGATCCCAATGTCGATGCATGGACGCCAGTCACCGAGG AAGGCGAACCGGCGGCCGTCGGGAACCGGGTAGCGCCCGAATCCCTCACAACGCCGAGCATCACGGGGTCGGCGGCGGAG TTTGATGGCGCGGACGCCTACCTCGCGCTCGATGTGGATGGGCCCGACCGCGACGACGTAACCTGGTTCGCGCATTGGCG CATCGATGGTGCAACGGTCTGGGGGGCTGATCTCACCTATCCCGATATCGATGCCGGTTCACCGATCGCTCTACGGGTCG GGCCGGTGACCGTAGATCAGGATATCGAGGTGGAAGTGGCCTATCAGGTCGGGGACGGGCGCGTGTCCGAGTGGTCGGCG CCGGTCACGGTCAGCACGGTCTCCGAAATCATCTACGACGGTGGCACGGCATGA
Upstream 100 bases:
>100_bases GCGATCTTCACTGGCAAGCGGTGGGCGTTGGTCGCGCCGCGCGGACTGGCTTTCGCTTCGCTGGAGCCGAGTTGTGTCCT GATGGCTTGGAGTGTGACGC
Downstream 100 bases:
>100_bases CGACGACCGTCTCGATCCGCTTCAAGTTCCGGCGCGGGACCGCTTCCGAGTGGACGACCGCAAATCCGGTGTTGCTTGCC GGGGAGCCGGGTCTGGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MGKLLGSILLIGAALAVNFIPGVGQALSGALGGVIAGTGVYATTAFSIASTLVSGLTLGVTALGLQSLGGILGSGGIKSE TLESAKKQPRPERVSAYGRLRLYGAWIVYETASESSVVSGGGVGTAVDIFAIHDGEMDGLEQRYLNDDKVYLSGDFVTPG SDGRYGDLKVSFYHTTGTIPGTGGTNDPAKRLLGPSVWTEDHRGDGVVLVFLFCAPVSKKFQEIYPQGIAPIPSLVARWQ ACPDPAAVDPLDEGSWTWTENPVRQLLHYMLVREGPRPALPRSHVDYATELAALRTAWWNRYIAPTLNYWTDAAAVCDEA RSLKAGGSEAKYRCCLAHKHTDSPEEVKSAFLTAFDGWMAPRADGAYVIYAGKSYTPTVSIGPDEIVSYTWDGGGVDDDE AVNELVCTYVSSLHDYNTVQCDPWRDDGDITARGRILSSNFDPNVPSHAQSRYLAKRKMARQNAINRGTVTTNIAGRAAR GERYINLRIEEAGAVFFDGVAEITGLSRSLTGGVTFQWVEFDPNVDAWTPVTEEGEPAAVGNRVAPESLTTPSITGSAAE FDGADAYLALDVDGPDRDDVTWFAHWRIDGATVWGADLTYPDIDAGSPIALRVGPVTVDQDIEVEVAYQVGDGRVSEWSA PVTVSTVSEIIYDGGTA
Sequences:
>Translated_657_residues MGKLLGSILLIGAALAVNFIPGVGQALSGALGGVIAGTGVYATTAFSIASTLVSGLTLGVTALGLQSLGGILGSGGIKSE TLESAKKQPRPERVSAYGRLRLYGAWIVYETASESSVVSGGGVGTAVDIFAIHDGEMDGLEQRYLNDDKVYLSGDFVTPG SDGRYGDLKVSFYHTTGTIPGTGGTNDPAKRLLGPSVWTEDHRGDGVVLVFLFCAPVSKKFQEIYPQGIAPIPSLVARWQ ACPDPAAVDPLDEGSWTWTENPVRQLLHYMLVREGPRPALPRSHVDYATELAALRTAWWNRYIAPTLNYWTDAAAVCDEA RSLKAGGSEAKYRCCLAHKHTDSPEEVKSAFLTAFDGWMAPRADGAYVIYAGKSYTPTVSIGPDEIVSYTWDGGGVDDDE AVNELVCTYVSSLHDYNTVQCDPWRDDGDITARGRILSSNFDPNVPSHAQSRYLAKRKMARQNAINRGTVTTNIAGRAAR GERYINLRIEEAGAVFFDGVAEITGLSRSLTGGVTFQWVEFDPNVDAWTPVTEEGEPAAVGNRVAPESLTTPSITGSAAE FDGADAYLALDVDGPDRDDVTWFAHWRIDGATVWGADLTYPDIDAGSPIALRVGPVTVDQDIEVEVAYQVGDGRVSEWSA PVTVSTVSEIIYDGGTA >Mature_656_residues GKLLGSILLIGAALAVNFIPGVGQALSGALGGVIAGTGVYATTAFSIASTLVSGLTLGVTALGLQSLGGILGSGGIKSET LESAKKQPRPERVSAYGRLRLYGAWIVYETASESSVVSGGGVGTAVDIFAIHDGEMDGLEQRYLNDDKVYLSGDFVTPGS DGRYGDLKVSFYHTTGTIPGTGGTNDPAKRLLGPSVWTEDHRGDGVVLVFLFCAPVSKKFQEIYPQGIAPIPSLVARWQA CPDPAAVDPLDEGSWTWTENPVRQLLHYMLVREGPRPALPRSHVDYATELAALRTAWWNRYIAPTLNYWTDAAAVCDEAR SLKAGGSEAKYRCCLAHKHTDSPEEVKSAFLTAFDGWMAPRADGAYVIYAGKSYTPTVSIGPDEIVSYTWDGGGVDDDEA VNELVCTYVSSLHDYNTVQCDPWRDDGDITARGRILSSNFDPNVPSHAQSRYLAKRKMARQNAINRGTVTTNIAGRAARG ERYINLRIEEAGAVFFDGVAEITGLSRSLTGGVTFQWVEFDPNVDAWTPVTEEGEPAAVGNRVAPESLTTPSITGSAAEF DGADAYLALDVDGPDRDDVTWFAHWRIDGATVWGADLTYPDIDAGSPIALRVGPVTVDQDIEVEVAYQVGDGRVSEWSAP VTVSTVSEIIYDGGTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70182; Mature: 70051
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLLGSILLIGAALAVNFIPGVGQALSGALGGVIAGTGVYATTAFSIASTLVSGLTLGV CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHH TALGLQSLGGILGSGGIKSETLESAKKQPRPERVSAYGRLRLYGAWIVYETASESSVVSG HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCEEEEEEEEEEEEECCCCCEECC GGVGTAVDIFAIHDGEMDGLEQRYLNDDKVYLSGDFVTPGSDGRYGDLKVSFYHTTGTIP CCCCCEEEEEEEECCCCCCHHHHHCCCCEEEEECCEECCCCCCCEEEEEEEEEEECCCCC GTGGTNDPAKRLLGPSVWTEDHRGDGVVLVFLFCAPVSKKFQEIYPQGIAPIPSLVARWQ CCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHH ACPDPAAVDPLDEGSWTWTENPVRQLLHYMLVREGPRPALPRSHVDYATELAALRTAWWN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH RYIAPTLNYWTDAAAVCDEARSLKAGGSEAKYRCCLAHKHTDSPEEVKSAFLTAFDGWMA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCC PRADGAYVIYAGKSYTPTVSIGPDEIVSYTWDGGGVDDDEAVNELVCTYVSSLHDYNTVQ CCCCCEEEEEECCCCCCEEECCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE CDPWRDDGDITARGRILSSNFDPNVPSHAQSRYLAKRKMARQNAINRGTVTTNIAGRAAR CCCCCCCCCEEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC GERYINLRIEEAGAVFFDGVAEITGLSRSLTGGVTFQWVEFDPNVDAWTPVTEEGEPAAV CCEEEEEEEECCCCEEECCHHHHHCCCHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC GNRVAPESLTTPSITGSAAEFDGADAYLALDVDGPDRDDVTWFAHWRIDGATVWGADLTY CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCEEEECCCCCC PDIDAGSPIALRVGPVTVDQDIEVEVAYQVGDGRVSEWSAPVTVSTVSEIIYDGGTA CCCCCCCEEEEEECCEEECCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCC >Mature Secondary Structure GKLLGSILLIGAALAVNFIPGVGQALSGALGGVIAGTGVYATTAFSIASTLVSGLTLGV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHH TALGLQSLGGILGSGGIKSETLESAKKQPRPERVSAYGRLRLYGAWIVYETASESSVVSG HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCEEEEEEEEEEEEECCCCCEECC GGVGTAVDIFAIHDGEMDGLEQRYLNDDKVYLSGDFVTPGSDGRYGDLKVSFYHTTGTIP CCCCCEEEEEEEECCCCCCHHHHHCCCCEEEEECCEECCCCCCCEEEEEEEEEEECCCCC GTGGTNDPAKRLLGPSVWTEDHRGDGVVLVFLFCAPVSKKFQEIYPQGIAPIPSLVARWQ CCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHH ACPDPAAVDPLDEGSWTWTENPVRQLLHYMLVREGPRPALPRSHVDYATELAALRTAWWN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH RYIAPTLNYWTDAAAVCDEARSLKAGGSEAKYRCCLAHKHTDSPEEVKSAFLTAFDGWMA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCC PRADGAYVIYAGKSYTPTVSIGPDEIVSYTWDGGGVDDDEAVNELVCTYVSSLHDYNTVQ CCCCCEEEEEECCCCCCEEECCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE CDPWRDDGDITARGRILSSNFDPNVPSHAQSRYLAKRKMARQNAINRGTVTTNIAGRAAR CCCCCCCCCEEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC GERYINLRIEEAGAVFFDGVAEITGLSRSLTGGVTFQWVEFDPNVDAWTPVTEEGEPAAV CCEEEEEEEECCCCEEECCHHHHHCCCHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC GNRVAPESLTTPSITGSAAEFDGADAYLALDVDGPDRDDVTWFAHWRIDGATVWGADLTY CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCEEEECCCCCC PDIDAGSPIALRVGPVTVDQDIEVEVAYQVGDGRVSEWSAPVTVSTVSEIIYDGGTA CCCCCCCEEEEEECCEEECCCCEEEEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA