| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200736
Identifier: 87200736
GI number: 87200736
Start: 2954556
End: 2955023
Strand: Direct
Name: 87200736
Synonym: Saro_2723
Alternate gene names: NA
Gene position: 2954556-2955023 (Clockwise)
Preceding gene: 87200735
Following gene: 87200737
Centisome position: 82.96
GC content: 67.52
Gene sequence:
>468_bases ATGCCCGAACTTCAGACCAGCTACACCGGCACCGTCGCCAAGGGCTACGCCGGCATGATCGCCAATGGCGAAACCTCCAA CCGCATCAGCCGCACCGTCGAGGATGCGGCCGGCATCGCATTCGGCAAGCCCGTCTATCGCGGCTCTGGCGATCACGGCT GCACCGCCACGGTCGGCACCCTCGCCACCTTCCTGGGCTGGACCGTCGCGACGTCGGCGATGGCCCCGGTCGCCGGTCAG GATGCCGACGAGTACCAGCAGTACGATACCGCCACGATCATCACTTCCGGCGCGATCTACGTCGCGGTCAAGGGCGCGGT GACTGATGGCGCGGCACTGACCGTCGGCACCGGCGGCGGAGCTGCCGACCTTGTTGGCGCCACAGCAGCCGACGCAACCC ACATCGCGACGGGTTGGGTCGCGGACGAAACTGTCACCGACGGCCTGTGCCGCATCGTGAAGCGCTAA
Upstream 100 bases:
>100_bases AAAGCCTGAGGTGCACAACCTCGCCCCGGCGAAGTTCGCCGATTCCGCAACCGTCGTCGCGTCGATCCGCGCCGCGCGCT ACGCCTAAGGAGGCTGACAG
Downstream 100 bases:
>100_bases GGGGACTGAAACAATGACCGCACTTTCGTTCTTCGACCGCGCTTCGGGCCAGATCACTGACCCCGGCGCATTCATGCTGG CTGATGCCGCGACCAAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPELQTSYTGTVAKGYAGMIANGETSNRISRTVEDAAGIAFGKPVYRGSGDHGCTATVGTLATFLGWTVATSAMAPVAGQ DADEYQQYDTATIITSGAIYVAVKGAVTDGAALTVGTGGGAADLVGATAADATHIATGWVADETVTDGLCRIVKR
Sequences:
>Translated_155_residues MPELQTSYTGTVAKGYAGMIANGETSNRISRTVEDAAGIAFGKPVYRGSGDHGCTATVGTLATFLGWTVATSAMAPVAGQ DADEYQQYDTATIITSGAIYVAVKGAVTDGAALTVGTGGGAADLVGATAADATHIATGWVADETVTDGLCRIVKR >Mature_154_residues PELQTSYTGTVAKGYAGMIANGETSNRISRTVEDAAGIAFGKPVYRGSGDHGCTATVGTLATFLGWTVATSAMAPVAGQD ADEYQQYDTATIITSGAIYVAVKGAVTDGAALTVGTGGGAADLVGATAADATHIATGWVADETVTDGLCRIVKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15553; Mature: 15422
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELQTSYTGTVAKGYAGMIANGETSNRISRTVEDAAGIAFGKPVYRGSGDHGCTATVGT CCCCCCCCCCCHHCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHH LATFLGWTVATSAMAPVAGQDADEYQQYDTATIITSGAIYVAVKGAVTDGAALTVGTGGG HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCEEEEEEECCCCCCCEEEEECCCC AADLVGATAADATHIATGWVADETVTDGLCRIVKR HHHHHCCCCCCCHHEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure PELQTSYTGTVAKGYAGMIANGETSNRISRTVEDAAGIAFGKPVYRGSGDHGCTATVGT CCCCCCCCCCHHCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHH LATFLGWTVATSAMAPVAGQDADEYQQYDTATIITSGAIYVAVKGAVTDGAALTVGTGGG HHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCEEEEEEECCCCCCCEEEEECCCC AADLVGATAADATHIATGWVADETVTDGLCRIVKR HHHHHCCCCCCCHHEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA