| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200735
Identifier: 87200735
GI number: 87200735
Start: 2953470
End: 2954543
Strand: Direct
Name: 87200735
Synonym: Saro_2722
Alternate gene names: NA
Gene position: 2953470-2954543 (Clockwise)
Preceding gene: 87200733
Following gene: 87200736
Centisome position: 82.93
GC content: 66.29
Gene sequence:
>1074_bases ATGCAATTCGTCGACGCCCTTACCCTTGATGCACCGCGCCGCACCCGCGAAGGCTTCATGGCCGTCCGCGCCAAGGCCGC CAGGGTCGGCGTCTATGACTACCTCGGCTCCGAGATCGATCCGGAGAATAAGCACGGCCTGCGCGACAAGGGCATGGTCA AGGTGCTGCGCGACGAGGCCACCGTCTTCGACATGGCGGCGGTGCGGTCCTTCGTCGGCAAGCCGATCACCGACGATCAC CCTACCGAGGCCGTCACTGCCGACAACTGGCGCCAGCACGCGCGCGGCACCGTCATGGGCGCGATCCGCGACGGCGATTA TCTCGCGTTCGACCTCCTGCTGACCGACGCCGATGCGATTGCCAAGGTCGATGCCGGCAAGTGCGAACTCAGCAACGGTT ATGCCGCGTCGCTGGAATTCGGCGACTTCGCAGCGCCCGACGGCACCAAGTGTGTCGCGCGCCAGACTTCCATCCAGGGC AACCACGTCGCGCTGGTGGACCGGGGTCGAGCTGGCCCCGAATGCCGCATCTCGGACGCGTTTGCGCACTGCGATGCAAT TCCGACTACCATCATGGAGCCTGTCATGAAGACGATCATGCTCGACGGTATCCCCGTCAATCTGGGCGATGCAGCCGCCG TCGAAGCGGCGATCGCCAAGCTGCAGGACACTGCCGCCAAGGCCGCAACTGCCCTCACCGATGCCGAAGCCAAGCTCAGC ACCGAGACCGGCAAGGTCGCCGCGCTCGAGAAGCAGCTCGCCGATGCCAAGGCCGAACTCGAACCGGCTCGTCTCGACCA GCTGGTTGCCGATCGCGCCGCGCTGGTGGCGAAGGTCAAGGCAATTGCGCCCGACCTGGTCGTCGATGGCAAGACCGACG CGGAAATCCGCCGCGCCGTGGTCGCTGCCAAGCTCGGCGATGCCTGCCCGAAGGATGACGCCGGCGTTGCCGGTGCGTTC GCGGTGCTGACCGCCACCAACGACGAAAAGCCTGAGGTGCACAACCTCGCCCCGGCGAAGTTCGCCGATTCCGCAACCGT CGTCGCGTCGATCCGCGCCGCGCGCTACGCCTAA
Upstream 100 bases:
>100_bases GCCTGCGGATGCGCACGCTCGCAAATCATCAATCAAGTGCTGCATATCTTCCTCTGACGGCGGTAACGACGCCTAGCCTT ACCGCATATCCCCGCCGTCG
Downstream 100 bases:
>100_bases GGAGGCTGACAGATGCCCGAACTTCAGACCAGCTACACCGGCACCGTCGCCAAGGGCTACGCCGGCATGATCGCCAATGG CGAAACCTCCAACCGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MQFVDALTLDAPRRTREGFMAVRAKAARVGVYDYLGSEIDPENKHGLRDKGMVKVLRDEATVFDMAAVRSFVGKPITDDH PTEAVTADNWRQHARGTVMGAIRDGDYLAFDLLLTDADAIAKVDAGKCELSNGYAASLEFGDFAAPDGTKCVARQTSIQG NHVALVDRGRAGPECRISDAFAHCDAIPTTIMEPVMKTIMLDGIPVNLGDAAAVEAAIAKLQDTAAKAATALTDAEAKLS TETGKVAALEKQLADAKAELEPARLDQLVADRAALVAKVKAIAPDLVVDGKTDAEIRRAVVAAKLGDACPKDDAGVAGAF AVLTATNDEKPEVHNLAPAKFADSATVVASIRAARYA
Sequences:
>Translated_357_residues MQFVDALTLDAPRRTREGFMAVRAKAARVGVYDYLGSEIDPENKHGLRDKGMVKVLRDEATVFDMAAVRSFVGKPITDDH PTEAVTADNWRQHARGTVMGAIRDGDYLAFDLLLTDADAIAKVDAGKCELSNGYAASLEFGDFAAPDGTKCVARQTSIQG NHVALVDRGRAGPECRISDAFAHCDAIPTTIMEPVMKTIMLDGIPVNLGDAAAVEAAIAKLQDTAAKAATALTDAEAKLS TETGKVAALEKQLADAKAELEPARLDQLVADRAALVAKVKAIAPDLVVDGKTDAEIRRAVVAAKLGDACPKDDAGVAGAF AVLTATNDEKPEVHNLAPAKFADSATVVASIRAARYA >Mature_357_residues MQFVDALTLDAPRRTREGFMAVRAKAARVGVYDYLGSEIDPENKHGLRDKGMVKVLRDEATVFDMAAVRSFVGKPITDDH PTEAVTADNWRQHARGTVMGAIRDGDYLAFDLLLTDADAIAKVDAGKCELSNGYAASLEFGDFAAPDGTKCVARQTSIQG NHVALVDRGRAGPECRISDAFAHCDAIPTTIMEPVMKTIMLDGIPVNLGDAAAVEAAIAKLQDTAAKAATALTDAEAKLS TETGKVAALEKQLADAKAELEPARLDQLVADRAALVAKVKAIAPDLVVDGKTDAEIRRAVVAAKLGDACPKDDAGVAGAF AVLTATNDEKPEVHNLAPAKFADSATVVASIRAARYA
Specific function: Unknown
COG id: COG3566
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019246 - InterPro: IPR016913 [H]
Pfam domain/function: PF09979 DUF2213 [H]
EC number: NA
Molecular weight: Translated: 37582; Mature: 37582
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFVDALTLDAPRRTREGFMAVRAKAARVGVYDYLGSEIDPENKHGLRDKGMVKVLRDEA CCCHHCEECCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH TVFDMAAVRSFVGKPITDDHPTEAVTADNWRQHARGTVMGAIRDGDYLAFDLLLTDADAI HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCEEEEEEEEECCHHH AKVDAGKCELSNGYAASLEFGDFAAPDGTKCVARQTSIQGNHVALVDRGRAGPECRISDA HHCCCCCEECCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCEEHHH FAHCDAIPTTIMEPVMKTIMLDGIPVNLGDAAAVEAAIAKLQDTAAKAATALTDAEAKLS HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC TETGKVAALEKQLADAKAELEPARLDQLVADRAALVAKVKAIAPDLVVDGKTDAEIRRAV CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHH VAAKLGDACPKDDAGVAGAFAVLTATNDEKPEVHNLAPAKFADSATVVASIRAARYA HHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCHHCCCCCHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MQFVDALTLDAPRRTREGFMAVRAKAARVGVYDYLGSEIDPENKHGLRDKGMVKVLRDEA CCCHHCEECCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH TVFDMAAVRSFVGKPITDDHPTEAVTADNWRQHARGTVMGAIRDGDYLAFDLLLTDADAI HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCEEEEEEEEECCHHH AKVDAGKCELSNGYAASLEFGDFAAPDGTKCVARQTSIQGNHVALVDRGRAGPECRISDA HHCCCCCEECCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCEEHHH FAHCDAIPTTIMEPVMKTIMLDGIPVNLGDAAAVEAAIAKLQDTAAKAATALTDAEAKLS HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHC TETGKVAALEKQLADAKAELEPARLDQLVADRAALVAKVKAIAPDLVVDGKTDAEIRRAV CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHH VAAKLGDACPKDDAGVAGAFAVLTATNDEKPEVHNLAPAKFADSATVVASIRAARYA HHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCHHCCCCCHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]