Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200685

Identifier: 87200685

GI number: 87200685

Start: 2909887

End: 2911326

Strand: Reverse

Name: 87200685

Synonym: Saro_2672

Alternate gene names: NA

Gene position: 2911326-2909887 (Counterclockwise)

Preceding gene: 87200687

Following gene: 87200682

Centisome position: 81.74

GC content: 65.0

Gene sequence:

>1440_bases
ATGAAGACCGTAGCGCGCGTCTCCGTCATCGCGCTGGCCTGTGCCGCCGGGTGGAGCATCCCGGCCCATGCATCGACCGC
CAAGCCCGACCTTGCAGCGCTGCAGGCGCAGCTCCAGCAGATGCAGTCGCAGATGCAGAGCCAGATGGACGCCATGCAGG
CCATGCAGGCGCAGATCGCGACGCTGCAGAACCAGCTCGCCGAGGCAAAGGCCAAGGGTGACGCCACCGCCACGGCGGTT
GCCGCGATCCCCGCGCCCACCGTCACCGGCAAGCCGCCCGTCGCGATCACGTGGGACGGTGGCCCGCGCATCGAATCGCC
GGTCGATCCCAAGAATCCGAAGGCTGGCAAGTGGAGCTTCAAGCCACGCGGACGTCTTCAGATCGATGCGGCATCGGTCA
TGGCGCCGTCCTCCATCGGCAGCAAGAGCCTGGGGATCGGTTCTGAATTCCGCCGGGCCTACCTTGGCGTGGACGGCACC
ATTCCCGGCAACTTCGGATATCGCATCGAGGCCGATTTCGCGAACAGCAGCGTCGAGCTGACCGACGTGTTCCTGACCTA
CAACGGCATCCGCAACGTTACGGTCACCCTCGGCCAGCAGAAGCCGTTCGAGTCGATGGAGGACACCGAGTCCGACCTCT
TCACCAGCTTCATGGAACGCGCCTCGTTCAATACCGCGTTCGGCTTCGAGCGCCGCCTCGGCCTTTCGGCGCAGTACCAG
AAGGGCATGGTGCTGGCCCAGGTCGGCGCGTTCACCGACAACGTGTCCGACCTCAACGCCGACAGCAACAACAGCTATTC
GATCGACGGTCGCTTCGCGTTGCAGCCCAAGCTCATGGGCGGGCAACTCCACCTCGGTGGCTCTGCCCACTACCACGACC
TGAACGATGGCTATTCAACCGTGCGCTATCGCGCTCGGCCCTTCACGCACACCACCGACGTGCGCTTCGTCGACACCAAG
GCAATCAGCGCGTTGTCGGAAACGAACTATGGCCTGGAGTTCGCATGGACCGGCGGGCCGTTGCACTTCGCCGCGGAATC
GCAGTGGATGAAGACCAATCGTCCCGGCGCGCTGGCCGACCCGACGTTCAACGGCGGCTATGCCGAGGCGGGCCTGTTCC
TGACCAAGGGCGACACGCTGCCCTATCGCCTCGCGGATGGTGCCTGGGGACGGATCAAGCCGAAGAATCCGGTCGACAAG
GGCGGCATCGGTGCGGTTCAGGTAAACGTCCGCTACGACTGGCTCGACCTCAACGACAACGGGGTGATCGGTGGCCGCCA
GCAGCTCGCCGGCGCGTCGTTGCTGTGGGTACCGACCGACTACGTCCGCTTCATTCTGGACTACGGCCACATGTGGATCA
ACGATGCGGCGGTGGCTGCGGGCACCGACCGCAGCTATTCGGCGGACGTGCTCGGGATGCGCGCGCAGTTCGACTTCTGA

Upstream 100 bases:

>100_bases
TTGCAGCAATTTTGCCGTCAACAAACTGTAACGAATCAGAAATAATAGGGCCACCAATCCGGAGCCGACCACGGCCCGGA
TCTGAGCGAAGGATTCTCGA

Downstream 100 bases:

>100_bases
TATTGCAAGCATTGAAAAGCCCGCCGTTCCCTGAGGAGCGGCGGGCTTTTTCGTGCCTTTGGCAGAGGGGCATCAGGCGA
TGCGCGAGACCCATCCGTGG

Product: phosphate-selective porin O and P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MKTVARVSVIALACAAGWSIPAHASTAKPDLAALQAQLQQMQSQMQSQMDAMQAMQAQIATLQNQLAEAKAKGDATATAV
AAIPAPTVTGKPPVAITWDGGPRIESPVDPKNPKAGKWSFKPRGRLQIDAASVMAPSSIGSKSLGIGSEFRRAYLGVDGT
IPGNFGYRIEADFANSSVELTDVFLTYNGIRNVTVTLGQQKPFESMEDTESDLFTSFMERASFNTAFGFERRLGLSAQYQ
KGMVLAQVGAFTDNVSDLNADSNNSYSIDGRFALQPKLMGGQLHLGGSAHYHDLNDGYSTVRYRARPFTHTTDVRFVDTK
AISALSETNYGLEFAWTGGPLHFAAESQWMKTNRPGALADPTFNGGYAEAGLFLTKGDTLPYRLADGAWGRIKPKNPVDK
GGIGAVQVNVRYDWLDLNDNGVIGGRQQLAGASLLWVPTDYVRFILDYGHMWINDAAVAAGTDRSYSADVLGMRAQFDF

Sequences:

>Translated_479_residues
MKTVARVSVIALACAAGWSIPAHASTAKPDLAALQAQLQQMQSQMQSQMDAMQAMQAQIATLQNQLAEAKAKGDATATAV
AAIPAPTVTGKPPVAITWDGGPRIESPVDPKNPKAGKWSFKPRGRLQIDAASVMAPSSIGSKSLGIGSEFRRAYLGVDGT
IPGNFGYRIEADFANSSVELTDVFLTYNGIRNVTVTLGQQKPFESMEDTESDLFTSFMERASFNTAFGFERRLGLSAQYQ
KGMVLAQVGAFTDNVSDLNADSNNSYSIDGRFALQPKLMGGQLHLGGSAHYHDLNDGYSTVRYRARPFTHTTDVRFVDTK
AISALSETNYGLEFAWTGGPLHFAAESQWMKTNRPGALADPTFNGGYAEAGLFLTKGDTLPYRLADGAWGRIKPKNPVDK
GGIGAVQVNVRYDWLDLNDNGVIGGRQQLAGASLLWVPTDYVRFILDYGHMWINDAAVAAGTDRSYSADVLGMRAQFDF
>Mature_479_residues
MKTVARVSVIALACAAGWSIPAHASTAKPDLAALQAQLQQMQSQMQSQMDAMQAMQAQIATLQNQLAEAKAKGDATATAV
AAIPAPTVTGKPPVAITWDGGPRIESPVDPKNPKAGKWSFKPRGRLQIDAASVMAPSSIGSKSLGIGSEFRRAYLGVDGT
IPGNFGYRIEADFANSSVELTDVFLTYNGIRNVTVTLGQQKPFESMEDTESDLFTSFMERASFNTAFGFERRLGLSAQYQ
KGMVLAQVGAFTDNVSDLNADSNNSYSIDGRFALQPKLMGGQLHLGGSAHYHDLNDGYSTVRYRARPFTHTTDVRFVDTK
AISALSETNYGLEFAWTGGPLHFAAESQWMKTNRPGALADPTFNGGYAEAGLFLTKGDTLPYRLADGAWGRIKPKNPVDK
GGIGAVQVNVRYDWLDLNDNGVIGGRQQLAGASLLWVPTDYVRFILDYGHMWINDAAVAAGTDRSYSADVLGMRAQFDF

Specific function: Unknown

COG id: COG3746

COG function: function code P; Phosphate-selective porin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010870 [H]

Pfam domain/function: PF07396 Porin_O_P [H]

EC number: NA

Molecular weight: Translated: 51694; Mature: 51694

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVARVSVIALACAAGWSIPAHASTAKPDLAALQAQLQQMQSQMQSQMDAMQAMQAQIA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLQNQLAEAKAKGDATATAVAAIPAPTVTGKPPVAITWDGGPRIESPVDPKNPKAGKWSF
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
KPRGRLQIDAASVMAPSSIGSKSLGIGSEFRRAYLGVDGTIPGNFGYRIEADFANSSVEL
CCCCCEEEEHHHEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEE
TDVFLTYNGIRNVTVTLGQQKPFESMEDTESDLFTSFMERASFNTAFGFERRLGLSAQYQ
EEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHH
KGMVLAQVGAFTDNVSDLNADSNNSYSIDGRFALQPKLMGGQLHLGGSAHYHDLNDGYST
CCEEEEEECCCCCCCCCCCCCCCCCEEECCEEEECCEECCCEEEECCCCCCCCCCCCCCE
VRYRARPFTHTTDVRFVDTKAISALSETNYGLEFAWTGGPLHFAAESQWMKTNRPGALAD
EEEECCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHCCCCCCCCCC
PTFNGGYAEAGLFLTKGDTLPYRLADGAWGRIKPKNPVDKGGIGAVQVNVRYDWLDLNDN
CCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
GVIGGRQQLAGASLLWVPTDYVRFILDYGHMWINDAAVAAGTDRSYSADVLGMRAQFDF
CCCCCHHHHCCCEEEEECHHHHHHHHHHCCEEECCCEEECCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MKTVARVSVIALACAAGWSIPAHASTAKPDLAALQAQLQQMQSQMQSQMDAMQAMQAQIA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLQNQLAEAKAKGDATATAVAAIPAPTVTGKPPVAITWDGGPRIESPVDPKNPKAGKWSF
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
KPRGRLQIDAASVMAPSSIGSKSLGIGSEFRRAYLGVDGTIPGNFGYRIEADFANSSVEL
CCCCCEEEEHHHEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEE
TDVFLTYNGIRNVTVTLGQQKPFESMEDTESDLFTSFMERASFNTAFGFERRLGLSAQYQ
EEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHH
KGMVLAQVGAFTDNVSDLNADSNNSYSIDGRFALQPKLMGGQLHLGGSAHYHDLNDGYST
CCEEEEEECCCCCCCCCCCCCCCCCEEECCEEEECCEECCCEEEECCCCCCCCCCCCCCE
VRYRARPFTHTTDVRFVDTKAISALSETNYGLEFAWTGGPLHFAAESQWMKTNRPGALAD
EEEECCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHCCCCCCCCCC
PTFNGGYAEAGLFLTKGDTLPYRLADGAWGRIKPKNPVDKGGIGAVQVNVRYDWLDLNDN
CCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
GVIGGRQQLAGASLLWVPTDYVRFILDYGHMWINDAAVAAGTDRSYSADVLGMRAQFDF
CCCCCHHHHCCCEEEEECHHHHHHHHHHCCEEECCCEEECCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11259647; 1938923 [H]