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The map label for this gene is recO [H]

Identifier: 87200674

GI number: 87200674

Start: 2899056

End: 2899664

Strand: Direct

Name: recO [H]

Synonym: Saro_2661

Alternate gene names: 87200674

Gene position: 2899056-2899664 (Clockwise)

Preceding gene: 87200670

Following gene: 87200675

Centisome position: 81.4

GC content: 70.11

Gene sequence:

>609_bases
ATGCAGATCCGTGCGCCAGCCATCCTCTGTTCGGTCCGGCCACACGGCGAACACGGGGCCGTCGTGAGGCTGATGACCGA
GGAGCACGGGCTTGCCGCCGCCTATGTGGCAGGCGCGCGCGGACGCGAGCTGCGCCCGCTGCTGATCCCGGGGAATCTTC
TCGAGGCAGAGGTCAGGGGCCGGGCGGCATCCCAATTGCCGTCCGCGCGACTCGAACTGGTGGCAAGCCGCGGACCATGG
CTGACCGAACCCTTGCCCAGCGCAGGGATCGGATGGGCCTGCGCCCTTACTGCCGCCACGCTGCCCGAGGGCCATCCCTA
TCCGCTGCTCTACGACTCGCTCGGCGCGCTTCTCGACGCGATCTGCCTCGCCCCCTCTGCCCGGGGGTGGGCGCGGGTCC
TCGCGGGCTACGAAGTGCTGCTGCTGCGCGAGGTCGGGTATGGTGCCGCCCCCGCGCCTCCGCCGGAAGAGCCCTGGCAC
GATCTGGTCGCCCGGCTCGAAAGGCAGGGCAAGGCAATCGGAAACCGCCTGCTTGCCGATCGAGCCGGCGATGTTATGGC
GGCCCGCGCGATTCTGCTGGATCGGCTGAAGCGCATCGGCGGCGATTGA

Upstream 100 bases:

>100_bases
TCATGTCCCCCAAACTATCGCACATTGCGCCTCGTTCCAACGAAGTTGTGCAAGTTTCGCACGCTTGCCCTCATGGCCAT
TCGGGAGCAGAGGCGAAGCC

Downstream 100 bases:

>100_bases
CGTCGCGCCGGAAGAAGACGCCGGAAAAGACGGACGAAGGGGTTTCCATGAAGATTGCGGTTCTGCCGGGCGACGGCATC
GGTCCCGAAGTGACGCGCGA

Product: recombinational DNA repair protein (RecF pathway)-like

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MQIRAPAILCSVRPHGEHGAVVRLMTEEHGLAAAYVAGARGRELRPLLIPGNLLEAEVRGRAASQLPSARLELVASRGPW
LTEPLPSAGIGWACALTAATLPEGHPYPLLYDSLGALLDAICLAPSARGWARVLAGYEVLLLREVGYGAAPAPPPEEPWH
DLVARLERQGKAIGNRLLADRAGDVMAARAILLDRLKRIGGD

Sequences:

>Translated_202_residues
MQIRAPAILCSVRPHGEHGAVVRLMTEEHGLAAAYVAGARGRELRPLLIPGNLLEAEVRGRAASQLPSARLELVASRGPW
LTEPLPSAGIGWACALTAATLPEGHPYPLLYDSLGALLDAICLAPSARGWARVLAGYEVLLLREVGYGAAPAPPPEEPWH
DLVARLERQGKAIGNRLLADRAGDVMAARAILLDRLKRIGGD
>Mature_202_residues
MQIRAPAILCSVRPHGEHGAVVRLMTEEHGLAAAYVAGARGRELRPLLIPGNLLEAEVRGRAASQLPSARLELVASRGPW
LTEPLPSAGIGWACALTAATLPEGHPYPLLYDSLGALLDAICLAPSARGWARVLAGYEVLLLREVGYGAAPAPPPEEPWH
DLVARLERQGKAIGNRLLADRAGDVMAARAILLDRLKRIGGD

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 21470; Mature: 21470

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIRAPAILCSVRPHGEHGAVVRLMTEEHGLAAAYVAGARGRELRPLLIPGNLLEAEVRG
CCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEHCCCCCCCCCEEEECCCHHHHHHHH
RAASQLPSARLELVASRGPWLTEPLPSAGIGWACALTAATLPEGHPYPLLYDSLGALLDA
HHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ICLAPSARGWARVLAGYEVLLLREVGYGAAPAPPPEEPWHDLVARLERQGKAIGNRLLAD
HHHCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAGDVMAARAILLDRLKRIGGD
HCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQIRAPAILCSVRPHGEHGAVVRLMTEEHGLAAAYVAGARGRELRPLLIPGNLLEAEVRG
CCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEHCCCCCCCCCEEEECCCHHHHHHHH
RAASQLPSARLELVASRGPWLTEPLPSAGIGWACALTAATLPEGHPYPLLYDSLGALLDA
HHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ICLAPSARGWARVLAGYEVLLLREVGYGAAPAPPPEEPWHDLVARLERQGKAIGNRLLAD
HHHCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAGDVMAARAILLDRLKRIGGD
HCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA