| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is bcr [H]
Identifier: 87200670
GI number: 87200670
Start: 2894432
End: 2895709
Strand: Direct
Name: bcr [H]
Synonym: Saro_2657
Alternate gene names: 87200670
Gene position: 2894432-2895709 (Clockwise)
Preceding gene: 87200668
Following gene: 87200674
Centisome position: 81.27
GC content: 65.73
Gene sequence:
>1278_bases ATGGCAGTTATGAACGCTAACAATTCAAACACCTCGACAAGCGCGCGCTTCATGGGGGAGCGCGAAACCATCGCGATGAT GGCGCTTGTCATGGCGCTCCAGGCGCTCGCGGTCGATTCGATGCTGCCGGCGCTGGGCGACATTGCCCGCGAACTTGCCG TGACCGATCCGAACGAGCGCCAGCTTGTCGTCGGCACGTTCCTGCTTGCCTCGGGCTTCGCCTCGCTGGTGCCGGGTTCG CTGGCCGACCGCTACGGGCGGCGGCCGGTGCTGCTGAGCTGCATCGGGCTCTATATCCTGTTCTCGCTGGCCTGCGCGCT GGCGACGACATTCGACATGCTGCTGGGCATGCGCGTGCTTCAAGCGGTGGGCTGCGGCGGGCTCGCCGTGCTGCCCGGCA CGATCATCCGCGACCGCTTTGCCGGCGACCAGATGGCCAAGCAGATGTCGATCATCTCGGTCGTGTTCCTCGTCGTGCCG ATGCTGGCACCAAGCATCGGGCAGGTCGTCCTGCTGTTTGCCGGGTGGCGGTGGATCTTCGTGTTCCTGGCGGTGATGGC GCTGGCGATGGGCGTGTGGGTGGCCGTGCGCCTGCCAGAGACGCTGCATCCCGAATATCGCCAGCCGATCCGCCCTGCCT CGATCGCGATCAACATGCTGGGCGCGGCGACGAACCGGTCGGCCATCGGCTATGTTCTGGGCGGCGCGCTGACGTTCGGC GCGATGATCGGCTACGTGAACTGCTCGCAGCAGCTCGTGGGCGAGCATTTTGGCGCGGGCAAGATGTTCCCGGTGCTGTT CGGCTTCTCCGCGCTGATGATGGCGGTGGCGAACTTCTCGAACTCGCGCATCGTCGAGCGGTTCGGCGCGCGGCGGGTTT CGCACACCGCCGTGATCCTGTTCATCTGCGTGAGCGCGCTGCAGGCCTGGTTCTCCAGCCGCCCGGACGAAACACTGTGG CAGTTCATGCCGCTGATGATCGCCAACATGATCCTCATCGGGTTCATCGGCGCGAACTTCGGCTCGATCGCGTTGCAGCC CTTTGCGCGCACCGCAGGCACGGCCAATTCGATGCATGCGTTCCTGCGCATGGTCATCGGGTCGATCATCGGCATCGTGG TGGGCCAGGCCTATGACGGAACCGCCCACCCCCTGGGACTTGCCCTGCTGGCGAGCGGGATACTGAGCCTCGCGCTGGTG CTGTTCAGCGAGAAGGGCAAGCTGTTCCGGCGCCTGCACCCGCCGGGAACGCCGCGCCCCATCGTGCTGGAGCACTGA
Upstream 100 bases:
>100_bases CGATCCGGTTCGCCATCTGCCGATCGAGGGTCCATTTCGCGATGCTAACCCGTTTCGCATTGCAACATAAAGGGTGGGAT TCGCGTGCGAACTAGTTCAA
Downstream 100 bases:
>100_bases TCAGGCGACGCGGGCGAGGTTCGACAGTACCTGCTCGGCCTCGTCCGGCCGCCCGAAGTAATAGCCCTGCATCAGGCGGA TGCCGAGCGCGCGGGCCGTG
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MAVMNANNSNTSTSARFMGERETIAMMALVMALQALAVDSMLPALGDIARELAVTDPNERQLVVGTFLLASGFASLVPGS LADRYGRRPVLLSCIGLYILFSLACALATTFDMLLGMRVLQAVGCGGLAVLPGTIIRDRFAGDQMAKQMSIISVVFLVVP MLAPSIGQVVLLFAGWRWIFVFLAVMALAMGVWVAVRLPETLHPEYRQPIRPASIAINMLGAATNRSAIGYVLGGALTFG AMIGYVNCSQQLVGEHFGAGKMFPVLFGFSALMMAVANFSNSRIVERFGARRVSHTAVILFICVSALQAWFSSRPDETLW QFMPLMIANMILIGFIGANFGSIALQPFARTAGTANSMHAFLRMVIGSIIGIVVGQAYDGTAHPLGLALLASGILSLALV LFSEKGKLFRRLHPPGTPRPIVLEH
Sequences:
>Translated_425_residues MAVMNANNSNTSTSARFMGERETIAMMALVMALQALAVDSMLPALGDIARELAVTDPNERQLVVGTFLLASGFASLVPGS LADRYGRRPVLLSCIGLYILFSLACALATTFDMLLGMRVLQAVGCGGLAVLPGTIIRDRFAGDQMAKQMSIISVVFLVVP MLAPSIGQVVLLFAGWRWIFVFLAVMALAMGVWVAVRLPETLHPEYRQPIRPASIAINMLGAATNRSAIGYVLGGALTFG AMIGYVNCSQQLVGEHFGAGKMFPVLFGFSALMMAVANFSNSRIVERFGARRVSHTAVILFICVSALQAWFSSRPDETLW QFMPLMIANMILIGFIGANFGSIALQPFARTAGTANSMHAFLRMVIGSIIGIVVGQAYDGTAHPLGLALLASGILSLALV LFSEKGKLFRRLHPPGTPRPIVLEH >Mature_424_residues AVMNANNSNTSTSARFMGERETIAMMALVMALQALAVDSMLPALGDIARELAVTDPNERQLVVGTFLLASGFASLVPGSL ADRYGRRPVLLSCIGLYILFSLACALATTFDMLLGMRVLQAVGCGGLAVLPGTIIRDRFAGDQMAKQMSIISVVFLVVPM LAPSIGQVVLLFAGWRWIFVFLAVMALAMGVWVAVRLPETLHPEYRQPIRPASIAINMLGAATNRSAIGYVLGGALTFGA MIGYVNCSQQLVGEHFGAGKMFPVLFGFSALMMAVANFSNSRIVERFGARRVSHTAVILFICVSALQAWFSSRPDETLWQ FMPLMIANMILIGFIGANFGSIALQPFARTAGTANSMHAFLRMVIGSIIGIVVGQAYDGTAHPLGLALLASGILSLALVL FSEKGKLFRRLHPPGTPRPIVLEH
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=388, Percent_Identity=26.2886597938144, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1790146, Length=392, Percent_Identity=28.0612244897959, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI87082312, Length=160, Percent_Identity=32.5, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1790195, Length=172, Percent_Identity=30.2325581395349, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI48994889, Length=354, Percent_Identity=25.1412429378531, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1790794, Length=171, Percent_Identity=26.9005847953216, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45526; Mature: 45395
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVMNANNSNTSTSARFMGERETIAMMALVMALQALAVDSMLPALGDIARELAVTDPNER CCEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QLVVGTFLLASGFASLVPGSLADRYGRRPVLLSCIGLYILFSLACALATTFDMLLGMRVL EEHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVGCGGLAVLPGTIIRDRFAGDQMAKQMSIISVVFLVVPMLAPSIGQVVLLFAGWRWIF HHHCCCCHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VFLAVMALAMGVWVAVRLPETLHPEYRQPIRPASIAINMLGAATNRSAIGYVLGGALTFG HHHHHHHHHHHHHHHHCCCHHCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AMIGYVNCSQQLVGEHFGAGKMFPVLFGFSALMMAVANFSNSRIVERFGARRVSHTAVIL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH FICVSALQAWFSSRPDETLWQFMPLMIANMILIGFIGANFGSIALQPFARTAGTANSMHA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHH FLRMVIGSIIGIVVGQAYDGTAHPLGLALLASGILSLALVLFSEKGKLFRRLHPPGTPRP HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCC IVLEH CEECC >Mature Secondary Structure AVMNANNSNTSTSARFMGERETIAMMALVMALQALAVDSMLPALGDIARELAVTDPNER CEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QLVVGTFLLASGFASLVPGSLADRYGRRPVLLSCIGLYILFSLACALATTFDMLLGMRVL EEHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVGCGGLAVLPGTIIRDRFAGDQMAKQMSIISVVFLVVPMLAPSIGQVVLLFAGWRWIF HHHCCCCHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VFLAVMALAMGVWVAVRLPETLHPEYRQPIRPASIAINMLGAATNRSAIGYVLGGALTFG HHHHHHHHHHHHHHHHCCCHHCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH AMIGYVNCSQQLVGEHFGAGKMFPVLFGFSALMMAVANFSNSRIVERFGARRVSHTAVIL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH FICVSALQAWFSSRPDETLWQFMPLMIANMILIGFIGANFGSIALQPFARTAGTANSMHA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHH FLRMVIGSIIGIVVGQAYDGTAHPLGLALLASGILSLALVLFSEKGKLFRRLHPPGTPRP HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCC IVLEH CEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]