| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200548
Identifier: 87200548
GI number: 87200548
Start: 2737946
End: 2738572
Strand: Reverse
Name: 87200548
Synonym: Saro_2535
Alternate gene names: NA
Gene position: 2738572-2737946 (Counterclockwise)
Preceding gene: 87200549
Following gene: 87200546
Centisome position: 76.89
GC content: 68.42
Gene sequence:
>627_bases ATGGACGTGCCGGGCGCGCCGCTGGCCGAGGGTTACCACAACGTGCGCGCGGGCGATCTTGCCTGCGTGGTCACCGCGCT TGAAATGCGCTCCCCGCCCGAGGGCCTGCGCCGCCTGACGCCCGAGGGCGACGTGCCCGTGCAACTCGTCCGCTGGAAGG AGTGCGCGCCCGCAAAGTACCGCCTGCTCTACAAGCGCGTCGGCGCACCCTGGCTATGGTGGTCGCGCCTGGCCAGGAGC GACGACGATCTGTCGGCGATCATCCACGATCCGGAAGTGCAGCTCTACGCCGTGGTCGACCGGGCGCGGGTCGAGGTCGG CATGCTCGAACTCGATTTTCGCGTCGCCGGCGAATGCGAGATTGCCTTCTTCGGCCTTATTCCGGGCGCGAGCGGCAAGG GCCTGGGCAAGTGGCTCATGCGCAAGGCGTTGCAGATGGCGTGGCGGCCCGGGGTGAGCCGCGTGTGGGTGCATACCTGC ACGCTCGACGATCCGCGCGCACCCGGCTTCTACATGGGGCAGGGTTTCGTGCCCTGTGCCCATTACGTCGAAGTCTTTCC CGACCCGCGTCTAGCCGGTCTTCTGGACGAGGACTGCGCGCCGCAGGTGCCGCTTATCCGGCCCTGA
Upstream 100 bases:
>100_bases CTTGTCTGGGACCGGGGCACGCTGTTCGGGCTCAAGACCGGCGGCAACATCGACGCGATCCTGATGAGTCTGCCGCCGGA AGCCGTCTGGAGCTGAGACC
Downstream 100 bases:
>100_bases CCGGCTTCGCGCGCCGCCAGATCATCCAGACCAGCGCGGCGGCGGCGAGCGGCATGAGATTGATCTCCAGCGGCAACGCC ACGGCCCGCGTCGCCAGAGG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; Thiosulfate Sulfurtransferase; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; GCN5-Like N-Acetyltransferase; GNAT Family Protein Acetyltransferase; Acetyltransferase Protein
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MDVPGAPLAEGYHNVRAGDLACVVTALEMRSPPEGLRRLTPEGDVPVQLVRWKECAPAKYRLLYKRVGAPWLWWSRLARS DDDLSAIIHDPEVQLYAVVDRARVEVGMLELDFRVAGECEIAFFGLIPGASGKGLGKWLMRKALQMAWRPGVSRVWVHTC TLDDPRAPGFYMGQGFVPCAHYVEVFPDPRLAGLLDEDCAPQVPLIRP
Sequences:
>Translated_208_residues MDVPGAPLAEGYHNVRAGDLACVVTALEMRSPPEGLRRLTPEGDVPVQLVRWKECAPAKYRLLYKRVGAPWLWWSRLARS DDDLSAIIHDPEVQLYAVVDRARVEVGMLELDFRVAGECEIAFFGLIPGASGKGLGKWLMRKALQMAWRPGVSRVWVHTC TLDDPRAPGFYMGQGFVPCAHYVEVFPDPRLAGLLDEDCAPQVPLIRP >Mature_208_residues MDVPGAPLAEGYHNVRAGDLACVVTALEMRSPPEGLRRLTPEGDVPVQLVRWKECAPAKYRLLYKRVGAPWLWWSRLARS DDDLSAIIHDPEVQLYAVVDRARVEVGMLELDFRVAGECEIAFFGLIPGASGKGLGKWLMRKALQMAWRPGVSRVWVHTC TLDDPRAPGFYMGQGFVPCAHYVEVFPDPRLAGLLDEDCAPQVPLIRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23176; Mature: 23176
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVPGAPLAEGYHNVRAGDLACVVTALEMRSPPEGLRRLTPEGDVPVQLVRWKECAPAKY CCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEECCCCCHHH RLLYKRVGAPWLWWSRLARSDDDLSAIIHDPEVQLYAVVDRARVEVGMLELDFRVAGECE HHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCEEEEEEEEHHHHEEEEEEEEEEECCCEE IAFFGLIPGASGKGLGKWLMRKALQMAWRPGVSRVWVHTCTLDDPRAPGFYMGQGFVPCA EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEECCCCCCCHH HYVEVFPDPRLAGLLDEDCAPQVPLIRP HHHHHCCCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MDVPGAPLAEGYHNVRAGDLACVVTALEMRSPPEGLRRLTPEGDVPVQLVRWKECAPAKY CCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEECCCCCHHH RLLYKRVGAPWLWWSRLARSDDDLSAIIHDPEVQLYAVVDRARVEVGMLELDFRVAGECE HHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCEEEEEEEEHHHHEEEEEEEEEEECCCEE IAFFGLIPGASGKGLGKWLMRKALQMAWRPGVSRVWVHTCTLDDPRAPGFYMGQGFVPCA EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEECCCCCCCHH HYVEVFPDPRLAGLLDEDCAPQVPLIRP HHHHHCCCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA