Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200528

Identifier: 87200528

GI number: 87200528

Start: 2719619

End: 2720899

Strand: Reverse

Name: 87200528

Synonym: Saro_2515

Alternate gene names: NA

Gene position: 2720899-2719619 (Counterclockwise)

Preceding gene: 87200529

Following gene: 87200526

Centisome position: 76.4

GC content: 69.24

Gene sequence:

>1281_bases
ATGCGCTTGTTCGCCCGTGTTCTCTTGATTGCCTCGAGCCTTTGCGCCGCGCCGCTGGCCGCGCAGAAGCAGGAGGCGCT
GACGCTCCTGCGACCCGACGCGGTATTCGACGGCGAGACCGCCGTCCTGCGCAAGGGTTGGGCCGTGCTGGTGCGGGGCA
ACCGGATCGAGGCGGTGGGACCGGATGTCGGCGCACCTGCCGAGGCCTCGGTGCTGGAACTGCCGGGAACGACCCTGATG
CCCGGCATGATCGAGGGGCATTCGCACCTCTTTCTCCACCCCTACAACGAGACGCCGTGGGACGACCAGGTCCTGCACGA
ACCGCTCGCGTTGAGGACTGCGCGGGCGACGGTTCATGCGCGCGCGACGCTGATGGCAGGCTTTACCACCGTGCGTGATG
TCGGCACCGAGGGCGCCGGCTATGCCGACGTGGGGCTGAAGCAGGCCATCGAGCAAGGGATCGTGCCGGGGCCGCGCATG
CTGGTGGCGACGCGGGCCATCGTGGCGCCCGGCGCCTACGGGCCGCGCGGGTTCGAGCCGGGCGTGGCAGTACCGCTGGG
GGCCGAGGAAGCCGGCGGGCCGGACCTTGTCGACGCGGTGCGTCGGCAGATCGGGGCGGGTGCGGATCTGGTGAAGGTCT
ATGCCGACTACCGCTGGGGACCGGGCGAGCCGAGCCGCCCGACCTTTACCGAAGGCGAGCTGAAAGCGGCGGTAGAGGCT
GCGCACAGCGCCGGGCGGCAGGTCGTCGCCCATGCCAGCACGGCGGAAGGAATGCGCCGTGCCGTGGCAGCGGGCGTCGA
CACCATCGAGCATGGGGACGAAGGTACGCCGGAGGTCTTCGCCGCGATGAAGGCCAGGGGCGTGGGCTTCTGCCCGACGC
TGGCGGCCGGGGATGCGGTGGCGCGCTATCGCGGGTGGAACGGTACAGCGCCCATGCCGAAGAGCGTGCAGGAAGGGTTC
GATGCACTTGCAAAGGCGCGGAAGGCCGGGGTGGCGATTTGCATGGGCGGCGATGTTGGCGTCTATGCGCACGGCGACAA
TGCGCGCGAAGCGGAAATGATGGTCAAGGGCGGAATGACGCCTGGCGAAGTGGCCATCGCCGCAACATCGGGCAATGCGC
GCATGTTCGGCATCGGCGGCCGTCTGGGCGCGGTCAGGACGGGTATGCTGGCTGACCTCGTGGCGGTCGAAGGCAATCCG
CTCGCCGATATTTCAGCGATCCGGAAGGTGGCGCTGGTGATGAAGGACGGCGTGCTGTGGAAAGGGCCTGTGGGGCGCTA
G

Upstream 100 bases:

>100_bases
GGCTTCCGCCTGAACCAGGCGCTGTCGAAAAAGGGTTGAGCAGCGGATTGGCGTTGCGCCGCCGCTGCGTATGATCGGGG
CCAGACCGAAAGGAAGGCCC

Downstream 100 bases:

>100_bases
GCGGCGTGGACGAGTTCCCCAGCGCCACGGCTGGAGGCAAAAACCGTCAGTTCAAGGAGGTGAGGTGAAGGAATATGTCG
ATATTTCGAGCCGAACCGAC

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MRLFARVLLIASSLCAAPLAAQKQEALTLLRPDAVFDGETAVLRKGWAVLVRGNRIEAVGPDVGAPAEASVLELPGTTLM
PGMIEGHSHLFLHPYNETPWDDQVLHEPLALRTARATVHARATLMAGFTTVRDVGTEGAGYADVGLKQAIEQGIVPGPRM
LVATRAIVAPGAYGPRGFEPGVAVPLGAEEAGGPDLVDAVRRQIGAGADLVKVYADYRWGPGEPSRPTFTEGELKAAVEA
AHSAGRQVVAHASTAEGMRRAVAAGVDTIEHGDEGTPEVFAAMKARGVGFCPTLAAGDAVARYRGWNGTAPMPKSVQEGF
DALAKARKAGVAICMGGDVGVYAHGDNAREAEMMVKGGMTPGEVAIAATSGNARMFGIGGRLGAVRTGMLADLVAVEGNP
LADISAIRKVALVMKDGVLWKGPVGR

Sequences:

>Translated_426_residues
MRLFARVLLIASSLCAAPLAAQKQEALTLLRPDAVFDGETAVLRKGWAVLVRGNRIEAVGPDVGAPAEASVLELPGTTLM
PGMIEGHSHLFLHPYNETPWDDQVLHEPLALRTARATVHARATLMAGFTTVRDVGTEGAGYADVGLKQAIEQGIVPGPRM
LVATRAIVAPGAYGPRGFEPGVAVPLGAEEAGGPDLVDAVRRQIGAGADLVKVYADYRWGPGEPSRPTFTEGELKAAVEA
AHSAGRQVVAHASTAEGMRRAVAAGVDTIEHGDEGTPEVFAAMKARGVGFCPTLAAGDAVARYRGWNGTAPMPKSVQEGF
DALAKARKAGVAICMGGDVGVYAHGDNAREAEMMVKGGMTPGEVAIAATSGNARMFGIGGRLGAVRTGMLADLVAVEGNP
LADISAIRKVALVMKDGVLWKGPVGR
>Mature_426_residues
MRLFARVLLIASSLCAAPLAAQKQEALTLLRPDAVFDGETAVLRKGWAVLVRGNRIEAVGPDVGAPAEASVLELPGTTLM
PGMIEGHSHLFLHPYNETPWDDQVLHEPLALRTARATVHARATLMAGFTTVRDVGTEGAGYADVGLKQAIEQGIVPGPRM
LVATRAIVAPGAYGPRGFEPGVAVPLGAEEAGGPDLVDAVRRQIGAGADLVKVYADYRWGPGEPSRPTFTEGELKAAVEA
AHSAGRQVVAHASTAEGMRRAVAAGVDTIEHGDEGTPEVFAAMKARGVGFCPTLAAGDAVARYRGWNGTAPMPKSVQEGF
DALAKARKAGVAICMGGDVGVYAHGDNAREAEMMVKGGMTPGEVAIAATSGNARMFGIGGRLGAVRTGMLADLVAVEGNP
LADISAIRKVALVMKDGVLWKGPVGR

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.coelicolor SCO1861 [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322248, Length=344, Percent_Identity=31.9767441860465, Blast_Score=132, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: NA

Molecular weight: Translated: 44125; Mature: 44125

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFARVLLIASSLCAAPLAAQKQEALTLLRPDAVFDGETAVLRKGWAVLVRGNRIEAVG
CHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCHHHHHCCCEEEEECCEEEECC
PDVGAPAEASVLELPGTTLMPGMIEGHSHLFLHPYNETPWDDQVLHEPLALRTARATVHA
CCCCCCCCCCEEECCCCCCCCCEECCCCEEEEECCCCCCCCHHHHHCHHHHHHHHHHHHH
RATLMAGFTTVRDVGTEGAGYADVGLKQAIEQGIVPGPRMLVATRAIVAPGAYGPRGFEP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCC
GVAVPLGAEEAGGPDLVDAVRRQIGAGADLVKVYADYRWGPGEPSRPTFTEGELKAAVEA
CCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
AHSAGRQVVAHASTAEGMRRAVAAGVDTIEHGDEGTPEVFAAMKARGVGFCPTLAAGDAV
HHHCCCEEEEECHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCCHHCCCHH
ARYRGWNGTAPMPKSVQEGFDALAKARKAGVAICMGGDVGVYAHGDNAREAEMMVKGGMT
HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCHHHHHHHHCCCC
PGEVAIAATSGNARMFGIGGRLGAVRTGMLADLVAVEGNPLADISAIRKVALVMKDGVLW
CCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCEEE
KGPVGR
CCCCCC
>Mature Secondary Structure
MRLFARVLLIASSLCAAPLAAQKQEALTLLRPDAVFDGETAVLRKGWAVLVRGNRIEAVG
CHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCHHHHHCCCEEEEECCEEEECC
PDVGAPAEASVLELPGTTLMPGMIEGHSHLFLHPYNETPWDDQVLHEPLALRTARATVHA
CCCCCCCCCCEEECCCCCCCCCEECCCCEEEEECCCCCCCCHHHHHCHHHHHHHHHHHHH
RATLMAGFTTVRDVGTEGAGYADVGLKQAIEQGIVPGPRMLVATRAIVAPGAYGPRGFEP
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCC
GVAVPLGAEEAGGPDLVDAVRRQIGAGADLVKVYADYRWGPGEPSRPTFTEGELKAAVEA
CCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
AHSAGRQVVAHASTAEGMRRAVAAGVDTIEHGDEGTPEVFAAMKARGVGFCPTLAAGDAV
HHHCCCEEEEECHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCCHHCCCHH
ARYRGWNGTAPMPKSVQEGFDALAKARKAGVAICMGGDVGVYAHGDNAREAEMMVKGGMT
HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCHHHHHHHHCCCC
PGEVAIAATSGNARMFGIGGRLGAVRTGMLADLVAVEGNPLADISAIRKVALVMKDGVLW
CCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCEEE
KGPVGR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]