| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200529
Identifier: 87200529
GI number: 87200529
Start: 2720987
End: 2721454
Strand: Reverse
Name: 87200529
Synonym: Saro_2516
Alternate gene names: NA
Gene position: 2721454-2720987 (Counterclockwise)
Preceding gene: 87200530
Following gene: 87200528
Centisome position: 76.41
GC content: 67.09
Gene sequence:
>468_bases ATGCGTAGTCCCATTGACCTCCTGACCCCCGGTCAGATCGCCCGTTCTGCTCGTGCGGTGGCGTTCGTTACGACGCTGGC GCTGGGCTACGGTTATGTCACGAACGCGCTAGAGCCGGTTTCGGCGGGCGTAGGCGCGTTCGTCCTGGCAAGCTCGCTCC TGCTGGCGGCGCCGCGGCAACGCGCGACCGAGATGCTGGGTGCGGTGACGGTGTGGATGTGCTTCGCCGAGTTTCTCGCG ACGGTTGAGAGCGGATCGTTTGCGATGTGGCGTCTGGCGGTTGCGGTCGCGACGCTGGGCGGCGTGATGGCGGTGATCCG CGTACAGCACCTGCGCGAACTGGCCCGAACAGCACCCGACGTGTTGCTGGGAAACCTCGACCGCCGCTCGATCTCGGGCA TCAGTGTCGTGCCGCTCTCGGATGCGAAGCTTGCCGCGCTGCGCGGGGACGACACGGCTTCCGCCTGA
Upstream 100 bases:
>100_bases GAGCGATCTGGGAAGGCCTGCTCGTCCTGCGGAGGCTCTGGTAAGCGGGGCGTCACGGGCGTAACCAATTGTTGACGCGC AAGATGATAGCTAAGTGTTC
Downstream 100 bases:
>100_bases ACCAGGCGCTGTCGAAAAAGGGTTGAGCAGCGGATTGGCGTTGCGCCGCCGCTGCGTATGATCGGGGCCAGACCGAAAGG AAGGCCCATGCGCTTGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MRSPIDLLTPGQIARSARAVAFVTTLALGYGYVTNALEPVSAGVGAFVLASSLLLAAPRQRATEMLGAVTVWMCFAEFLA TVESGSFAMWRLAVAVATLGGVMAVIRVQHLRELARTAPDVLLGNLDRRSISGISVVPLSDAKLAALRGDDTASA
Sequences:
>Translated_155_residues MRSPIDLLTPGQIARSARAVAFVTTLALGYGYVTNALEPVSAGVGAFVLASSLLLAAPRQRATEMLGAVTVWMCFAEFLA TVESGSFAMWRLAVAVATLGGVMAVIRVQHLRELARTAPDVLLGNLDRRSISGISVVPLSDAKLAALRGDDTASA >Mature_155_residues MRSPIDLLTPGQIARSARAVAFVTTLALGYGYVTNALEPVSAGVGAFVLASSLLLAAPRQRATEMLGAVTVWMCFAEFLA TVESGSFAMWRLAVAVATLGGVMAVIRVQHLRELARTAPDVLLGNLDRRSISGISVVPLSDAKLAALRGDDTASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16170; Mature: 16170
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPIDLLTPGQIARSARAVAFVTTLALGYGYVTNALEPVSAGVGAFVLASSLLLAAPRQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH RATEMLGAVTVWMCFAEFLATVESGSFAMWRLAVAVATLGGVMAVIRVQHLRELARTAPD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH VLLGNLDRRSISGISVVPLSDAKLAALRGDDTASA HHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCC >Mature Secondary Structure MRSPIDLLTPGQIARSARAVAFVTTLALGYGYVTNALEPVSAGVGAFVLASSLLLAAPRQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH RATEMLGAVTVWMCFAEFLATVESGSFAMWRLAVAVATLGGVMAVIRVQHLRELARTAPD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH VLLGNLDRRSISGISVVPLSDAKLAALRGDDTASA HHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA