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The map label for this gene is 87200513

Identifier: 87200513

GI number: 87200513

Start: 2700925

End: 2702313

Strand: Direct

Name: 87200513

Synonym: Saro_2500

Alternate gene names: NA

Gene position: 2700925-2702313 (Clockwise)

Preceding gene: 87200508

Following gene: 87200520

Centisome position: 75.83

GC content: 60.76

Gene sequence:

>1389_bases
ATGGCGCGGACGGGAATGTATGTTCTGCAGGGAATTGTTCCTTCGGAAATTGCTGTAGCTCCGTTTGATGTCAAGGTAAT
AGACATCTACAACGATGACGGCGTAGCTTTCACGCCCACGCAGGTTGCGCAGATGGGCGGCGGACCGGGCAGTGCATTAC
TTCTCGGATACTTCAGCATTGGTGAAGCAGAGGTCTATCGAGACTACTTCAACACCATTCCGAAATCGGCCCTCGGACCT
GAAAATCCACAGTGGGCCGGTAACTATCAGGTCGCCTACTGGACGGCCGAATGGCGCACCGTGGCAACCGCCTACATCGA
CCGGATCATCGCTGCCGGCTATGATGGCGTCTACTTCGACGTCGTCGACGAATACCAGCAGAAGTGGGCGCAGACCTATT
GCCCGGGCGGCGCGGCAGGTGCCGAACAAGCCATGGCGGATCTGGTCGCCTACCTCGCCGACTATGCCCATGCCAAGAAC
CCGGCGTTCAAGATCTGGGCAAACAACGCCGAGGAACTGCTGACCAACCAGACATATTTCAGCCACCTCGACGGCATGTT
CAAGGAGAACCTGTTCTATACGGACAGCGGTTCGAAGCAGCCTTCGAGCGAGACGCAGTACAGCATGAGCCTCCTCCAGA
TGATGCTGGCGGCGGGCAAGGATGTCATCGCCATCGAGTACGTTTCGGACTCGGCAAAGATCGCCGACGTGGAAACGCAG
GCCGCGCACTACAACGTCGGCTACTACACCGCGGACATCAATCTCGACGGCATCAGCTATACCGGCGTGCTGCCCGGCCA
GTACATCCACGAAGACTGGAGCGGTCTGACGACGACCACGACGACGACCAGCACCAGCACCACCTCTACGTCGACAACCA
CCTCCACCACGACAACGTCGACCACCACGCTGGTGACCGATCTCACCCTGACCGGGACGAGCAGTTCCGACAACCTGGCT
GGCAAGTCCGGCAACGACAAGCTCTACGGCAAAGCCGGTGCCGACGTGCTGTCAGGCAACGGCGGCAACGACTGGCTCGA
AGGCGGCAACGGCAACGACAAGCTTGCCGGCGGCGCGGGAGCGGACTCCTTCGTGTTCCGCGCCTATGGCAACAAGCACA
GGGACGCGATCGCCGACTACCAGGCCGGCACGGACCATATCGTGCTCGACCACGCGGTGTTCACTGCGGCGGGCGCCATC
GGCACCTTGAGCGATGCCGGATTCTGGATCGGATCGGCAGCCCACGATGCCAGCGACCGGATCATCTACAACGCATCCAC
TGGATTGATCAGCTACGATGCGGACGGCACCGGCAGACTCTCGGCCGTCGCCATCGCCACCGTCGCGCCCGGCACGCTGC
TGACGCATGCCGACTTCCTGATCATCTGA

Upstream 100 bases:

>100_bases
TGGCATCCCGAAATTAAGCACCAAAATGGGACTTAATACGCATCCTAACCGAAGGCTGCGTAATTTCCAACGCCCTCCGG
AAAAGAGGAAGGATCGGATC

Downstream 100 bases:

>100_bases
TCGCCGGCAACCGCGCGCAAGAGGCACGCGCAAGGGAGCGGCCCACGCCGCTCCCTCGTCCGGCGTCATCCGAACGCGTT
CCAGCCGCGTGCGCGCAGTT

Product: hypothetical protein

Products: AMP; diphosphate; L-cysteinyl-tRNA(Cys)

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MARTGMYVLQGIVPSEIAVAPFDVKVIDIYNDDGVAFTPTQVAQMGGGPGSALLLGYFSIGEAEVYRDYFNTIPKSALGP
ENPQWAGNYQVAYWTAEWRTVATAYIDRIIAAGYDGVYFDVVDEYQQKWAQTYCPGGAAGAEQAMADLVAYLADYAHAKN
PAFKIWANNAEELLTNQTYFSHLDGMFKENLFYTDSGSKQPSSETQYSMSLLQMMLAAGKDVIAIEYVSDSAKIADVETQ
AAHYNVGYYTADINLDGISYTGVLPGQYIHEDWSGLTTTTTTTSTSTTSTSTTTSTTTTSTTTLVTDLTLTGTSSSDNLA
GKSGNDKLYGKAGADVLSGNGGNDWLEGGNGNDKLAGGAGADSFVFRAYGNKHRDAIADYQAGTDHIVLDHAVFTAAGAI
GTLSDAGFWIGSAAHDASDRIIYNASTGLISYDADGTGRLSAVAIATVAPGTLLTHADFLII

Sequences:

>Translated_462_residues
MARTGMYVLQGIVPSEIAVAPFDVKVIDIYNDDGVAFTPTQVAQMGGGPGSALLLGYFSIGEAEVYRDYFNTIPKSALGP
ENPQWAGNYQVAYWTAEWRTVATAYIDRIIAAGYDGVYFDVVDEYQQKWAQTYCPGGAAGAEQAMADLVAYLADYAHAKN
PAFKIWANNAEELLTNQTYFSHLDGMFKENLFYTDSGSKQPSSETQYSMSLLQMMLAAGKDVIAIEYVSDSAKIADVETQ
AAHYNVGYYTADINLDGISYTGVLPGQYIHEDWSGLTTTTTTTSTSTTSTSTTTSTTTTSTTTLVTDLTLTGTSSSDNLA
GKSGNDKLYGKAGADVLSGNGGNDWLEGGNGNDKLAGGAGADSFVFRAYGNKHRDAIADYQAGTDHIVLDHAVFTAAGAI
GTLSDAGFWIGSAAHDASDRIIYNASTGLISYDADGTGRLSAVAIATVAPGTLLTHADFLII
>Mature_461_residues
ARTGMYVLQGIVPSEIAVAPFDVKVIDIYNDDGVAFTPTQVAQMGGGPGSALLLGYFSIGEAEVYRDYFNTIPKSALGPE
NPQWAGNYQVAYWTAEWRTVATAYIDRIIAAGYDGVYFDVVDEYQQKWAQTYCPGGAAGAEQAMADLVAYLADYAHAKNP
AFKIWANNAEELLTNQTYFSHLDGMFKENLFYTDSGSKQPSSETQYSMSLLQMMLAAGKDVIAIEYVSDSAKIADVETQA
AHYNVGYYTADINLDGISYTGVLPGQYIHEDWSGLTTTTTTTSTSTTSTSTTTSTTTTSTTTLVTDLTLTGTSSSDNLAG
KSGNDKLYGKAGADVLSGNGGNDWLEGGNGNDKLAGGAGADSFVFRAYGNKHRDAIADYQAGTDHIVLDHAVFTAAGAIG
TLSDAGFWIGSAAHDASDRIIYNASTGLISYDADGTGRLSAVAIATVAPGTLLTHADFLII

Specific function: Unknown

COG id: COG2342

COG function: function code G; Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016063
- InterPro:   IPR017853
- InterPro:   IPR016062
- InterPro:   IPR004352 [H]

Pfam domain/function: PF03537 DUF297 [H]

EC number: 6.1.1.16

Molecular weight: Translated: 48973; Mature: 48842

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS00330 HEMOLYSIN_CALCIUM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTGMYVLQGIVPSEIAVAPFDVKVIDIYNDDGVAFTPTQVAQMGGGPGSALLLGYFSI
CCCCCEEHHHCCCCCCEEECCCCEEEEEEECCCCCEECHHHHHHCCCCCCCEEEEEEEEC
GEAEVYRDYFNTIPKSALGPENPQWAGNYQVAYWTAEWRTVATAYIDRIIAAGYDGVYFD
CHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEH
VVDEYQQKWAQTYCPGGAAGAEQAMADLVAYLADYAHAKNPAFKIWANNAEELLTNQTYF
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCHHH
SHLDGMFKENLFYTDSGSKQPSSETQYSMSLLQMMLAAGKDVIAIEYVSDSAKIADVETQ
HHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECC
AAHYNVGYYTADINLDGISYTGVLPGQYIHEDWSGLTTTTTTTSTSTTSTSTTTSTTTTS
CEEEECEEEEEEEEECCEEEECCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC
TTTLVTDLTLTGTSSSDNLAGKSGNDKLYGKAGADVLSGNGGNDWLEGGNGNDKLAGGAG
EEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC
ADSFVFRAYGNKHRDAIADYQAGTDHIVLDHAVFTAAGAIGTLSDAGFWIGSAAHDASDR
CCCEEEEECCCCCHHHHHHCCCCCCEEEEHHHHHHHHCCCCCCCCCCEEEECCCCCCCCC
IIYNASTGLISYDADGTGRLSAVAIATVAPGTLLTHADFLII
EEEECCCCEEEECCCCCCCEEEEEEEEECCCHHEECCCEEEC
>Mature Secondary Structure 
ARTGMYVLQGIVPSEIAVAPFDVKVIDIYNDDGVAFTPTQVAQMGGGPGSALLLGYFSI
CCCCEEHHHCCCCCCEEECCCCEEEEEEECCCCCEECHHHHHHCCCCCCCEEEEEEEEC
GEAEVYRDYFNTIPKSALGPENPQWAGNYQVAYWTAEWRTVATAYIDRIIAAGYDGVYFD
CHHHHHHHHHHHCCCHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEH
VVDEYQQKWAQTYCPGGAAGAEQAMADLVAYLADYAHAKNPAFKIWANNAEELLTNQTYF
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCHHH
SHLDGMFKENLFYTDSGSKQPSSETQYSMSLLQMMLAAGKDVIAIEYVSDSAKIADVETQ
HHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECC
AAHYNVGYYTADINLDGISYTGVLPGQYIHEDWSGLTTTTTTTSTSTTSTSTTTSTTTTS
CEEEECEEEEEEEEECCEEEECCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC
TTTLVTDLTLTGTSSSDNLAGKSGNDKLYGKAGADVLSGNGGNDWLEGGNGNDKLAGGAG
EEEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCC
ADSFVFRAYGNKHRDAIADYQAGTDHIVLDHAVFTAAGAIGTLSDAGFWIGSAAHDASDR
CCCEEEEECCCCCHHHHHHCCCCCCEEEEHHHHHHHHCCCCCCCCCCEEEECCCCCCCCC
IIYNASTGLISYDADGTGRLSAVAIATVAPGTLLTHADFLII
EEEECCCCEEEECCCCCCCEEEEEEEEECCCHHEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-cysteine; tRNA(Cys)

Specific reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]