Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is pspC [C]

Identifier: 87200508

GI number: 87200508

Start: 2696022

End: 2696246

Strand: Direct

Name: pspC [C]

Synonym: Saro_2495

Alternate gene names: 87200508

Gene position: 2696022-2696246 (Clockwise)

Preceding gene: 87200494

Following gene: 87200513

Centisome position: 75.7

GC content: 65.33

Gene sequence:

>225_bases
ATGAGCCAGCTTCGCTTCGACGACTCGGCTCCGCGCCCGATCGAAACCTCGCGCGGCTTCCGCCTCGACAAGGCGGGCGG
CAAGGTGATGGGCGTCTGTGCCGGTATCGCCAACTACTTCAACGTCGACGTGACGCTGGTCCGCGTGGCCTTCGCACTCG
GCACCCTGCTCGGCTTTGGATCCGCCGTGCTGGTCTACCTGCTGATCGGCCTAATCGCCGACTGA

Upstream 100 bases:

>100_bases
CAGCCGCCAGCGCCTTCGCCCTGAGCCTCGCGCTGATCGCAGGAACCGTCAGCACCCCGGCCCACCAGGCCGCCACCGTC
GCCCTGCAGGAGATGATCTG

Downstream 100 bases:

>100_bases
CACCTGAGGGCCCGTCCAGCCCCAGCGCCCCGCCTCTCCCGCCCCCGGAGAGGCGGGGCTTCTCCATTTCAGACCTGCGG
CGCCTTGGCGAAGGGCGAGA

Product: phage shock protein C, PspC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MSQLRFDDSAPRPIETSRGFRLDKAGGKVMGVCAGIANYFNVDVTLVRVAFALGTLLGFGSAVLVYLLIGLIAD

Sequences:

>Translated_74_residues
MSQLRFDDSAPRPIETSRGFRLDKAGGKVMGVCAGIANYFNVDVTLVRVAFALGTLLGFGSAVLVYLLIGLIAD
>Mature_73_residues
SQLRFDDSAPRPIETSRGFRLDKAGGKVMGVCAGIANYFNVDVTLVRVAFALGTLLGFGSAVLVYLLIGLIAD

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspc Is Involved In Transcription Regulation. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7849; Mature: 7718

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLRFDDSAPRPIETSRGFRLDKAGGKVMGVCAGIANYFNVDVTLVRVAFALGTLLGFG
CCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVLVYLLIGLIAD
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SQLRFDDSAPRPIETSRGFRLDKAGGKVMGVCAGIANYFNVDVTLVRVAFALGTLLGFG
CCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVLVYLLIGLIAD
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA