| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200278
Identifier: 87200278
GI number: 87200278
Start: 2403714
End: 2404073
Strand: Direct
Name: 87200278
Synonym: Saro_2264
Alternate gene names: NA
Gene position: 2403714-2404073 (Clockwise)
Preceding gene: 87200277
Following gene: 87200279
Centisome position: 67.49
GC content: 66.67
Gene sequence:
>360_bases GTGAAAGGTCGCACAGTGCTGAAATCGTCGATTGGCGCGGCCTTGCTGTGCCTGCCCCTCATCACGTCCGCCCATGCCCG CCCTGCGGAAGAAATGGGCCAGCGCCCCACCCCGCCCCGGACGACAGGCCGCCCGGCCGACCCGATAGCCGTCACCGACA CCTGCGGACTGCGCATGGCTGTCCGCTATTCGGGCACCTCCGCCACCCCGAAGGTGCGCGAAGCCCTCGTGGCATCTGTC GCGCACAATCGGGTGCGCTGGATTCGGCCCGGAACGGCAATCACGCAGGACTATCGGCCTGACAGGCTGAACATCATCCT CGACGAAGACGGCCGGGTGATGACAATGCGCTGCGGATGA
Upstream 100 bases:
>100_bases TACGGGTCGTCAAATTCCACCAACGGCCGCGCACAATCGACGAAAGCAGTGGACGCCACCGTATTGGACGCTATCCCTCC ATTATGGAGGAATTACTCCA
Downstream 100 bases:
>100_bases CACGCAGTTGCGTCCCCTTGTGCGGGACGACCAGCTTTGGCACCTTGCACCTCCCGAAGTGACTTCAGGAGATCCCCCTT GCCCAAGCTTTCCCGCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKGRTVLKSSIGAALLCLPLITSAHARPAEEMGQRPTPPRTTGRPADPIAVTDTCGLRMAVRYSGTSATPKVREALVASV AHNRVRWIRPGTAITQDYRPDRLNIILDEDGRVMTMRCG
Sequences:
>Translated_119_residues MKGRTVLKSSIGAALLCLPLITSAHARPAEEMGQRPTPPRTTGRPADPIAVTDTCGLRMAVRYSGTSATPKVREALVASV AHNRVRWIRPGTAITQDYRPDRLNIILDEDGRVMTMRCG >Mature_119_residues MKGRTVLKSSIGAALLCLPLITSAHARPAEEMGQRPTPPRTTGRPADPIAVTDTCGLRMAVRYSGTSATPKVREALVASV AHNRVRWIRPGTAITQDYRPDRLNIILDEDGRVMTMRCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12937; Mature: 12937
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGRTVLKSSIGAALLCLPLITSAHARPAEEMGQRPTPPRTTGRPADPIAVTDTCGLRMA CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEE VRYSGTSATPKVREALVASVAHNRVRWIRPGTAITQDYRPDRLNIILDEDGRVMTMRCG EEECCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECC >Mature Secondary Structure MKGRTVLKSSIGAALLCLPLITSAHARPAEEMGQRPTPPRTTGRPADPIAVTDTCGLRMA CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEE VRYSGTSATPKVREALVASVAHNRVRWIRPGTAITQDYRPDRLNIILDEDGRVMTMRCG EEECCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA