Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is yqeY [H]

Identifier: 87200247

GI number: 87200247

Start: 2374724

End: 2375179

Strand: Direct

Name: yqeY [H]

Synonym: Saro_2232

Alternate gene names: 87200247

Gene position: 2374724-2375179 (Clockwise)

Preceding gene: 87200243

Following gene: 87200248

Centisome position: 66.68

GC content: 65.35

Gene sequence:

>456_bases
ATGATCCGCGACACGATCAAGGCCGCGCAGGTGGCCGCCATGAAGTCTGGCGACAAGCCCCGTCTCGCCGCCGTCCGCCT
CATCCTTGCCAAGCTCAAGGACAAGGACATCGAACTGCGTACCGCGTCGGCCGTGCCGGAGGACGACGTGCTCGTCACCG
ACGTCCTCCAGAAGATGGCCAAGCAGCGCCGCGAATCGATCACGCTCTACGAACAGGGCGGCCGACAGGAACTGGCTGAC
GTGGAAAAGGCCGAGCTGGCGGTGATCGAGGAATTCCTGCCGCAGCAGATGAGCGAGGACGACACCAAGGCGGCCATCGC
CGCGATCATCGCCGAGACCGGTGCGGCAGGCATGAAGGACATGGGCAAGGTCGTGGCGGCGCTCAAGGCGAAACACGGCA
CTCAGCTCGACATGGGCAAGGCAAGCGGGCTGGTGAAGGCTGCGCTGGCCGGCTGA

Upstream 100 bases:

>100_bases
CTGCATTGCCGCAGCGTCAACCTAGCGATTCCCGAAAGTTTCCCCTACATGTGCGGTTTCCCGCTTTTGGCGGGCCAAAC
TCCACAGGAAATACGTTTAC

Downstream 100 bases:

>100_bases
CACGTTAGCTCCCCTCCCGCCTGCGGGAGGGGCTGGGGGAGGGCATGTTGGCCGACGGAACCAGTTGGGACCAGGACCGA
GACTTTGATCGTGCCTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MIRDTIKAAQVAAMKSGDKPRLAAVRLILAKLKDKDIELRTASAVPEDDVLVTDVLQKMAKQRRESITLYEQGGRQELAD
VEKAELAVIEEFLPQQMSEDDTKAAIAAIIAETGAAGMKDMGKVVAALKAKHGTQLDMGKASGLVKAALAG

Sequences:

>Translated_151_residues
MIRDTIKAAQVAAMKSGDKPRLAAVRLILAKLKDKDIELRTASAVPEDDVLVTDVLQKMAKQRRESITLYEQGGRQELAD
VEKAELAVIEEFLPQQMSEDDTKAAIAAIIAETGAAGMKDMGKVVAALKAKHGTQLDMGKASGLVKAALAG
>Mature_151_residues
MIRDTIKAAQVAAMKSGDKPRLAAVRLILAKLKDKDIELRTASAVPEDDVLVTDVLQKMAKQRRESITLYEQGGRQELAD
VEKAELAVIEEFLPQQMSEDDTKAAIAAIIAETGAAGMKDMGKVVAALKAKHGTQLDMGKASGLVKAALAG

Specific function: Unknown

COG id: COG1610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003789
- InterPro:   IPR023168
- InterPro:   IPR019004 [H]

Pfam domain/function: PF09424 YqeY [H]

EC number: NA

Molecular weight: Translated: 16085; Mature: 16085

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDTIKAAQVAAMKSGDKPRLAAVRLILAKLKDKDIELRTASAVPEDDVLVTDVLQKMA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH
KQRRESITLYEQGGRQELADVEKAELAVIEEFLPQQMSEDDTKAAIAAIIAETGAAGMKD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH
MGKVVAALKAKHGTQLDMGKASGLVKAALAG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIRDTIKAAQVAAMKSGDKPRLAAVRLILAKLKDKDIELRTASAVPEDDVLVTDVLQKMA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH
KQRRESITLYEQGGRQELADVEKAELAVIEEFLPQQMSEDDTKAAIAAIIAETGAAGMKD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH
MGKVVAALKAKHGTQLDMGKASGLVKAALAG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 9023197 [H]