| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200177
Identifier: 87200177
GI number: 87200177
Start: 2299438
End: 2300247
Strand: Direct
Name: 87200177
Synonym: Saro_2161
Alternate gene names: NA
Gene position: 2299438-2300247 (Clockwise)
Preceding gene: 87200176
Following gene: 87200178
Centisome position: 64.56
GC content: 68.15
Gene sequence:
>810_bases ATGCGTTTTCCGACACGTCTCCTTGCCTGCGCCTGTCTGGCCGGTCTTGCCAGTGGCTGCGCCACGTTCGGCACCAACGT CGAGGGCGATTTCACCTGCCGCGCGCCGAAGGGCGACTGCGCACCGGCTCAGGTCATCGATGCCAAGGCGACGGACAATC TGTCGAACGGCACGCTGCTCCATGCTGACGCGCGGCAGAGGTCAGGCGTCGTGGATGCCGACACCAGCCGCACAGCGGAA CGCACCTTGCGCGTCGTCTTCCCCGCTCATGTCGATGAAGCTGGAACGCTGCATGACGAAGCGGTCGCCTGGACCGTCGT CGAAAATCCGCGCTGGGCCACCGAGCTGCGCCGCAAGGCGGGTGAGGACCAGGGCGGATCCCTGATGCGCCAGGTCCGTC GGCAGCTGAAAGCCGCTCAGAGAGCCCCTGCACCGGACGGCGCGGAGGGAGACCCGAACGTACCTGATGAGGCGTCGCCC TTCTCGTCTGCACGCGACGACGCGGGTCAGGCTGGCGGCATCTCGGGCGCCGATGCCCCCAGTCCCTTCAACGAAACTTC AGATGCCTCGCCGCTGGTCCTCCCCTCCACGGCGCGTGAGGCCGTTGCCGGTGCCAAGGCACCGGCGGTCGAGGGGTTCG ACACGTCGCCTCCCCCGCGTGATCGAGCCCCTCGGCCTGAGGCGGGGCAGAGCGCTCCGCTGTTCCCCAGCGCAGCGGCG ATTGAAGCCGCGAAAGCTGCAATCCGCCCGGCAGTCAGAACCGGCGAACAGCCGATCGTCAGCACCTCGCAGCCCAAGGA GCCCAAGTGA
Upstream 100 bases:
>100_bases GGCGCCGTTCTCGAAGGCTTCCGGCCTGCCGCTGTGCTCCGGGACTTCCTGCGCGCTGGCCCCTCCCTGACCCCCACCCC TGCTCCCAAAGGATAGACCC
Downstream 100 bases:
>100_bases TGGCCGAACAACTCAAGACCGTCGTCGATCGGCTGCTCAGCGGATTGCTGGGTGATGCCGAGCACGCCGACAAAGCCCGC CCGCAGCTCATGGTCGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRFPTRLLACACLAGLASGCATFGTNVEGDFTCRAPKGDCAPAQVIDAKATDNLSNGTLLHADARQRSGVVDADTSRTAE RTLRVVFPAHVDEAGTLHDEAVAWTVVENPRWATELRRKAGEDQGGSLMRQVRRQLKAAQRAPAPDGAEGDPNVPDEASP FSSARDDAGQAGGISGADAPSPFNETSDASPLVLPSTAREAVAGAKAPAVEGFDTSPPPRDRAPRPEAGQSAPLFPSAAA IEAAKAAIRPAVRTGEQPIVSTSQPKEPK
Sequences:
>Translated_269_residues MRFPTRLLACACLAGLASGCATFGTNVEGDFTCRAPKGDCAPAQVIDAKATDNLSNGTLLHADARQRSGVVDADTSRTAE RTLRVVFPAHVDEAGTLHDEAVAWTVVENPRWATELRRKAGEDQGGSLMRQVRRQLKAAQRAPAPDGAEGDPNVPDEASP FSSARDDAGQAGGISGADAPSPFNETSDASPLVLPSTAREAVAGAKAPAVEGFDTSPPPRDRAPRPEAGQSAPLFPSAAA IEAAKAAIRPAVRTGEQPIVSTSQPKEPK >Mature_269_residues MRFPTRLLACACLAGLASGCATFGTNVEGDFTCRAPKGDCAPAQVIDAKATDNLSNGTLLHADARQRSGVVDADTSRTAE RTLRVVFPAHVDEAGTLHDEAVAWTVVENPRWATELRRKAGEDQGGSLMRQVRRQLKAAQRAPAPDGAEGDPNVPDEASP FSSARDDAGQAGGISGADAPSPFNETSDASPLVLPSTAREAVAGAKAPAVEGFDTSPPPRDRAPRPEAGQSAPLFPSAAA IEAAKAAIRPAVRTGEQPIVSTSQPKEPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27878; Mature: 27878
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFPTRLLACACLAGLASGCATFGTNVEGDFTCRAPKGDCAPAQVIDAKATDNLSNGTLL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHEECCCCCCCCCCCEEE HADARQRSGVVDADTSRTAERTLRVVFPAHVDEAGTLHDEAVAWTVVENPRWATELRRKA ECCHHHHCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHC GEDQGGSLMRQVRRQLKAAQRAPAPDGAEGDPNVPDEASPFSSARDDAGQAGGISGADAP CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC SPFNETSDASPLVLPSTAREAVAGAKAPAVEGFDTSPPPRDRAPRPEAGQSAPLFPSAAA CCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH IEAAKAAIRPAVRTGEQPIVSTSQPKEPK HHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFPTRLLACACLAGLASGCATFGTNVEGDFTCRAPKGDCAPAQVIDAKATDNLSNGTLL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHEECCCCCCCCCCCEEE HADARQRSGVVDADTSRTAERTLRVVFPAHVDEAGTLHDEAVAWTVVENPRWATELRRKA ECCHHHHCCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHC GEDQGGSLMRQVRRQLKAAQRAPAPDGAEGDPNVPDEASPFSSARDDAGQAGGISGADAP CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC SPFNETSDASPLVLPSTAREAVAGAKAPAVEGFDTSPPPRDRAPRPEAGQSAPLFPSAAA CCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH IEAAKAAIRPAVRTGEQPIVSTSQPKEPK HHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA