| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is dsbC [C]
Identifier: 87200176
GI number: 87200176
Start: 2298519
End: 2299433
Strand: Direct
Name: dsbC [C]
Synonym: Saro_2160
Alternate gene names: 87200176
Gene position: 2298519-2299433 (Clockwise)
Preceding gene: 87200175
Following gene: 87200177
Centisome position: 64.54
GC content: 66.12
Gene sequence:
>915_bases ATGATCGAAAATACTCTCCTCGAGCAGGACAATCGTCGGCGCCGCTGGTTGCGTACCAGCGCCGGACTGGCGGCGATCAT CGCCATGTCGGCCGCGACGGGATGGGGTGTGGCAAGCCTTGCTGCCCCTGCTGCCGCTCCGGACACGGCGAAAGTTCGAG AGGCGCTCAAGCTGCGCCTGCCCAAGACGCCGATCGACGCGATCAACTGCAAGGGCCTTGGCGGCCTGTGCGAGGTCGCG TCCAAATCGACGCTCTTCTACGTCGACCGGGCTGCAAAGTATCTGGTAATCGGCCGGGTCTACGACATGGAAGCCCGTCA GGATCTGACGGCCGCCCGATTGCTTGCCCTCAATCCCGACCTGTTGGCATCGGGAGCAGCGCGGCGCAGCAATCCCGAGA CGCAAGCAGAAGCCGATCCACCCCCCGCTGCAGCGTCAGCCCGGAACTCCCCGCCGCGCCATGTCCCGCTCGGCAAGCTT CCCGCCAAAGGCGCGATCACCTGGGGTCCTGCCAATGGTCCGCGCGTCGTTGTCTTCTCGGACTTCCACTGCGGCTATTG CAAGAAGCTCGAGGCCGAATTGAAGGCGATCGGAGCGCGGGTTGAAGAGCGGCCGATCTCGATCTTCGGGGCCGAAAGCC GGCGCGATGCTGAACGGGTTCTGTGCTCGCCCCGGCCTGAGCTGGCGCTGCATATGGCCTATTCGGGTCTGGCGCTCGCC AATCCCAAACCCTGCGACACGAGCGGTCTCGATGCCAACGAGGCCTTCGCGCGGGCCCACGGTTTTGGCGGCACCCCTGT GATCGTGCGCCCCGCCGATGGCGCCGTTCTCGAAGGCTTCCGGCCTGCCGCTGTGCTCCGGGACTTCCTGCGCGCTGGCC CCTCCCTGACCCCCACCCCTGCTCCCAAAGGATAG
Upstream 100 bases:
>100_bases TGATCGAGCGCGCCGAACAGTACCAACCCGTCGTCGAGATGCCGACCGGCATCGATGTCGAGATCGTGTTCCTCGACGGC GTCTACGTGAGGAACTCCCA
Downstream 100 bases:
>100_bases ACCCATGCGTTTTCCGACACGTCTCCTTGCCTGCGCCTGTCTGGCCGGTCTTGCCAGTGGCTGCGCCACGTTCGGCACCA ACGTCGAGGGCGATTTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: ThiolDisulfide Interchange Protein DsbC; Disulfide Isomerase; Disulfide Bond Isomerase DsbC/G-Like Protein
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MIENTLLEQDNRRRRWLRTSAGLAAIIAMSAATGWGVASLAAPAAAPDTAKVREALKLRLPKTPIDAINCKGLGGLCEVA SKSTLFYVDRAAKYLVIGRVYDMEARQDLTAARLLALNPDLLASGAARRSNPETQAEADPPPAAASARNSPPRHVPLGKL PAKGAITWGPANGPRVVVFSDFHCGYCKKLEAELKAIGARVEERPISIFGAESRRDAERVLCSPRPELALHMAYSGLALA NPKPCDTSGLDANEAFARAHGFGGTPVIVRPADGAVLEGFRPAAVLRDFLRAGPSLTPTPAPKG
Sequences:
>Translated_304_residues MIENTLLEQDNRRRRWLRTSAGLAAIIAMSAATGWGVASLAAPAAAPDTAKVREALKLRLPKTPIDAINCKGLGGLCEVA SKSTLFYVDRAAKYLVIGRVYDMEARQDLTAARLLALNPDLLASGAARRSNPETQAEADPPPAAASARNSPPRHVPLGKL PAKGAITWGPANGPRVVVFSDFHCGYCKKLEAELKAIGARVEERPISIFGAESRRDAERVLCSPRPELALHMAYSGLALA NPKPCDTSGLDANEAFARAHGFGGTPVIVRPADGAVLEGFRPAAVLRDFLRAGPSLTPTPAPKG >Mature_304_residues MIENTLLEQDNRRRRWLRTSAGLAAIIAMSAATGWGVASLAAPAAAPDTAKVREALKLRLPKTPIDAINCKGLGGLCEVA SKSTLFYVDRAAKYLVIGRVYDMEARQDLTAARLLALNPDLLASGAARRSNPETQAEADPPPAAASARNSPPRHVPLGKL PAKGAITWGPANGPRVVVFSDFHCGYCKKLEAELKAIGARVEERPISIFGAESRRDAERVLCSPRPELALHMAYSGLALA NPKPCDTSGLDANEAFARAHGFGGTPVIVRPADGAVLEGFRPAAVLRDFLRAGPSLTPTPAPKG
Specific function: Required For Disulfide Bond Formation In Some Periplasmic Proteins. Acts By Transferring Its Disulfide Bond To Other Proteins And Is Reduced In The Process. Dsbc Is Reoxidized By A Yet Uncharacterized Protein. Also Acts As A Disulfide Isomerase. [C]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.3.4.1
Molecular weight: Translated: 32152; Mature: 32152
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIENTLLEQDNRRRRWLRTSAGLAAIIAMSAATGWGVASLAAPAAAPDTAKVREALKLRL CCCCCHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHCC PKTPIDAINCKGLGGLCEVASKSTLFYVDRAAKYLVIGRVYDMEARQDLTAARLLALNPD CCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCEEEEEEEEECCHHHHHHHHHHHEECCHH LLASGAARRSNPETQAEADPPPAAASARNSPPRHVPLGKLPAKGAITWGPANGPRVVVFS HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEE DFHCGYCKKLEAELKAIGARVEERPISIFGAESRRDAERVLCSPRPELALHMAYSGLALA CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCEEEEEEECCEEEC NPKPCDTSGLDANEAFARAHGFGGTPVIVRPADGAVLEGFRPAAVLRDFLRAGPSLTPTP CCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHCCCCCCCCC APKG CCCC >Mature Secondary Structure MIENTLLEQDNRRRRWLRTSAGLAAIIAMSAATGWGVASLAAPAAAPDTAKVREALKLRL CCCCCHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHCC PKTPIDAINCKGLGGLCEVASKSTLFYVDRAAKYLVIGRVYDMEARQDLTAARLLALNPD CCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCEEEEEEEEECCHHHHHHHHHHHEECCHH LLASGAARRSNPETQAEADPPPAAASARNSPPRHVPLGKLPAKGAITWGPANGPRVVVFS HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEE DFHCGYCKKLEAELKAIGARVEERPISIFGAESRRDAERVLCSPRPELALHMAYSGLALA CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCEEEEEEECCEEEC NPKPCDTSGLDANEAFARAHGFGGTPVIVRPADGAVLEGFRPAAVLRDFLRAGPSLTPTP CCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHCCCCCCCCC APKG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA