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The map label for this gene is yraN [C]

Identifier: 87200099

GI number: 87200099

Start: 2220539

End: 2220853

Strand: Reverse

Name: yraN [C]

Synonym: Saro_2083

Alternate gene names: 87200099

Gene position: 2220853-2220539 (Counterclockwise)

Preceding gene: 87200100

Following gene: 87200097

Centisome position: 62.36

GC content: 72.38

Gene sequence:

>315_bases
ATGCTGGCCGCGTGGTGGCTGCGCTTTCGTGGCTGGCGCATCCTGGCGCGGCGCGTGAAGATGCCGGTAGGCGAGGTCGA
TATCGTGGCGCGCAAGGGCCGCACTGTCGCTTTCGTGGAAGTGAAGTGGCGGCGCGATGCGGCTGCGCTCGACGGGGCGG
TGGATGCGCAGCGGTTGCGGCGGGTGGCGCGGGCGGCCGAGGCGCTTGCCGCGCGCCACTTGAGGGCCGGGGACGACATG
CGGATCGACGTGATCCTTGTTGCCCCCGGACGCCTGCCGCGCCGGATCGCCAACGCCTGGCAACCCGGCGCCTAG

Upstream 100 bases:

>100_bases
CGAAGGCGCACGGGCTGGACCGCAAGGCGCTCTATGCGCGAGCGCTGGAACTCAAGGGGTGAAGCGCGCCGAGGCCGAGC
GGCAGGGGCGCAAGGCCGAG

Downstream 100 bases:

>100_bases
GCGCGGCGTACCAGTCCGGCGTGTGTTAGTGCGCCTTGTGGTCGTCCTTGTGTTCAGCGTCCTTGTGTTCGCCGTCGTGA
TGGTCGCCGCCATGGTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MLAAWWLRFRGWRILARRVKMPVGEVDIVARKGRTVAFVEVKWRRDAAALDGAVDAQRLRRVARAAEALAARHLRAGDDM
RIDVILVAPGRLPRRIANAWQPGA

Sequences:

>Translated_104_residues
MLAAWWLRFRGWRILARRVKMPVGEVDIVARKGRTVAFVEVKWRRDAAALDGAVDAQRLRRVARAAEALAARHLRAGDDM
RIDVILVAPGRLPRRIANAWQPGA
>Mature_104_residues
MLAAWWLRFRGWRILARRVKMPVGEVDIVARKGRTVAFVEVKWRRDAAALDGAVDAQRLRRVARAAEALAARHLRAGDDM
RIDVILVAPGRLPRRIANAWQPGA

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 11746; Mature: 11746

Theoretical pI: Translated: 12.37; Mature: 12.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAWWLRFRGWRILARRVKMPVGEVDIVARKGRTVAFVEVKWRRDAAALDGAVDAQRLR
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEECCCHHHHCCCCCHHHHH
RVARAAEALAARHLRAGDDMRIDVILVAPGRLPRRIANAWQPGA
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MLAAWWLRFRGWRILARRVKMPVGEVDIVARKGRTVAFVEVKWRRDAAALDGAVDAQRLR
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEECCCHHHHCCCCCHHHHH
RVARAAEALAARHLRAGDDMRIDVILVAPGRLPRRIANAWQPGA
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA