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The map label for this gene is rsmI [H]

Identifier: 87200100

GI number: 87200100

Start: 2220892

End: 2221728

Strand: Reverse

Name: rsmI [H]

Synonym: Saro_2084

Alternate gene names: 87200100

Gene position: 2221728-2220892 (Counterclockwise)

Preceding gene: 87200103

Following gene: 87200099

Centisome position: 62.38

GC content: 68.22

Gene sequence:

>837_bases
ATGGACACGTCTCTGCTTGAACCCGGGCTGTATATTGTCGCCACCCCGATTGGCAATCTTGGTGACGTGACCCGTCGCGC
GGCAGAAACGCTTGGCCGCTGCGCTGTGGTAGCCTGCGAGGATACGCGTGTCACCGGCAAGTTGCTGAATCTTCTTGGCT
TGCACAAGCCGATGCGGCGCTATGACGATCACGCGAGCGATGCCGCGCGCGAGGCCTTGCTGGCCGAAATGGCGCAGCGG
CCGGTGGCGCTCGTCTCGGACGCGGGAACGCCGCTGATTTCCGATCCCGGCTATCGGCTGGTCCGCGAGGCGCGGGCGCG
GGGGATCACCGTCACTTCGCTGCCAGGCCCCAGCGCGCTGATCGTCGCGCTGTCGATGTCCGGCCTGCCGACCGACCGCT
TCATGTTCGCAGGGTTCCTGCCGAACAAGGACAAGGCGCGCGGCGACGTGCTGGCCGAGCTTGCGGGCGTGCCGGCGACG
CTGGTGTTCTACGAGACCGGGCCACGGCTCGTCGCCTCGCTCGAGGCCATCGCCGCGCGTCTTCCGGGGCGCGAGGTGGC
GGTGGCGCGCGAATTGACCAAGCTGCACGAGGAATGCCGCAGCGGCAGCGCGGCCGAGCTTTGCGACCATTACACGGCGC
ATCCGCCAAAGGGCGAGATCGTGCTGCTGGTAGGCCCTCCTGGTGAAGCGGAGGCCCCCGACGAGGATACCGTCGATGCC
GAGCTGCGCGCGGCGCTGGCGGAAATGTCGGTGTCGCAGGCGGCGGGGAAAGTGGCGAAGGCGCACGGGCTGGACCGCAA
GGCGCTCTATGCGCGAGCGCTGGAACTCAAGGGGTGA

Upstream 100 bases:

>100_bases
CGATGGGCGAAGGTCCGTCTGGCGCCATTCGCCCTCATGCCCCATCATCATTCCCGGCACACCCTCTTGTCGCTCACGGC
CACGCGGTCCATTGGAAGGC

Downstream 100 bases:

>100_bases
AGCGCGCCGAGGCCGAGCGGCAGGGGCGCAAGGCCGAGATGCTGGCCGCGTGGTGGCTGCGCTTTCGTGGCTGGCGCATC
CTGGCGCGGCGCGTGAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDTSLLEPGLYIVATPIGNLGDVTRRAAETLGRCAVVACEDTRVTGKLLNLLGLHKPMRRYDDHASDAAREALLAEMAQR
PVALVSDAGTPLISDPGYRLVREARARGITVTSLPGPSALIVALSMSGLPTDRFMFAGFLPNKDKARGDVLAELAGVPAT
LVFYETGPRLVASLEAIAARLPGREVAVARELTKLHEECRSGSAAELCDHYTAHPPKGEIVLLVGPPGEAEAPDEDTVDA
ELRAALAEMSVSQAAGKVAKAHGLDRKALYARALELKG

Sequences:

>Translated_278_residues
MDTSLLEPGLYIVATPIGNLGDVTRRAAETLGRCAVVACEDTRVTGKLLNLLGLHKPMRRYDDHASDAAREALLAEMAQR
PVALVSDAGTPLISDPGYRLVREARARGITVTSLPGPSALIVALSMSGLPTDRFMFAGFLPNKDKARGDVLAELAGVPAT
LVFYETGPRLVASLEAIAARLPGREVAVARELTKLHEECRSGSAAELCDHYTAHPPKGEIVLLVGPPGEAEAPDEDTVDA
ELRAALAEMSVSQAAGKVAKAHGLDRKALYARALELKG
>Mature_278_residues
MDTSLLEPGLYIVATPIGNLGDVTRRAAETLGRCAVVACEDTRVTGKLLNLLGLHKPMRRYDDHASDAAREALLAEMAQR
PVALVSDAGTPLISDPGYRLVREARARGITVTSLPGPSALIVALSMSGLPTDRFMFAGFLPNKDKARGDVLAELAGVPAT
LVFYETGPRLVASLEAIAARLPGREVAVARELTKLHEECRSGSAAELCDHYTAHPPKGEIVLLVGPPGEAEAPDEDTVDA
ELRAALAEMSVSQAAGKVAKAHGLDRKALYARALELKG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=275, Percent_Identity=46.5454545454545, Blast_Score=197, Evalue=7e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29375; Mature: 29375

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSLLEPGLYIVATPIGNLGDVTRRAAETLGRCAVVACEDTRVTGKLLNLLGLHKPMRR
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHH
YDDHASDAAREALLAEMAQRPVALVSDAGTPLISDPGYRLVREARARGITVTSLPGPSAL
HCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEE
IVALSMSGLPTDRFMFAGFLPNKDKARGDVLAELAGVPATLVFYETGPRLVASLEAIAAR
EEEEECCCCCCHHHEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHH
LPGREVAVARELTKLHEECRSGSAAELCDHYTAHPPKGEIVLLVGPPGEAEAPDEDTVDA
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHH
ELRAALAEMSVSQAAGKVAKAHGLDRKALYARALELKG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDTSLLEPGLYIVATPIGNLGDVTRRAAETLGRCAVVACEDTRVTGKLLNLLGLHKPMRR
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHH
YDDHASDAAREALLAEMAQRPVALVSDAGTPLISDPGYRLVREARARGITVTSLPGPSAL
HCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEE
IVALSMSGLPTDRFMFAGFLPNKDKARGDVLAELAGVPATLVFYETGPRLVASLEAIAAR
EEEEECCCCCCHHHEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHH
LPGREVAVARELTKLHEECRSGSAAELCDHYTAHPPKGEIVLLVGPPGEAEAPDEDTVDA
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHH
ELRAALAEMSVSQAAGKVAKAHGLDRKALYARALELKG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA