Click here to switch to the map view.

The map label for this gene is ycaI [H]

Identifier: 87200046

GI number: 87200046

Start: 2163622

End: 2165904

Strand: Reverse

Name: ycaI [H]

Synonym: Saro_2030

Alternate gene names: 87200046

Gene position: 2165904-2163622 (Counterclockwise)

Preceding gene: 87200050

Following gene: 87200042

Centisome position: 60.81

GC content: 67.28

Gene sequence:

>2283_bases
ATGGTGTCTCCGGCAGAAGTTGGCCCAGCAGCAGGATTTCCTGCCGCCGATCCGGATGCTCTGCCAGCGCGACGCGCGCG
GCATTGGGACATCCGCGCGCGATTGTCCAGCATGCTTGATGATGGAGAGGCGTTCCTTGCCGCCCACCCGTTTGAACGCG
GCCTCTGGCTGGTGGTTTCCTTCGGCGCGGGGATCGTATGCTGGCTCGCGCTTCCCCTGTCGGTCCAGTGGACGGCGACG
CTGCTGGCCTGCGGTTCTGCCGCGCTGATCTCCCTGCTGTACGTCGACGAACACCGCCTTCCATACATCCGGCTCGGCAT
CGCGGGCGTGGCGATCATGCTGGCGGCCGGCATGGCAACGGTGTGGACCAAATCCGCCCTGGTGGGCCAGCCCGGCATCG
GTCGGCCGATGGTGACCACTGTGGTTGGAACGGTCCTCGACCGGCGCGAGGAACCGGCCAGGGAACGCTCGCGCCTTCTG
CTGCTGACGCGCCTGCCCGAGTTTCCCGATCCTGTTCGCGTCAGGGTGAACCTTCCGAAGGACGAAGACCGGCCCTTCAT
CGTGGAGGGCGCTACGCTTGCCTTGCGCGCGCGATTGATGCCGCCCGCGCCGCCCATGCTGCCCGGTGCCTATGATTTCG
CCCGCAAGGCCTGGTTCGATGGAATCGCGGCCACCGGGACGGTCATGGACGATGTCCGGCTTGTTTCGCCGTCCGGCAAC
GCCACCACCTTGCGGAAAATCCAGAGGGCCCTGGCGGATCACGTCCGCTCTCGTCTCGCCGGTTCCGCAGGGGCGATAGC
CGCGGCCTTTGCCAGCGGAGACAGGGGCGCAATCGCCAAGGCGGACGAGGATGCGATGCGCGATGCCGGGCTTACCCATC
TGCTGTCGATCAGCGGCCTCCATGTCAGTGCGCTGGTGGGGGCCGTTTACTGGATTTTCGCGCGATCGCTTGCGCTGGTC
CCCTGGGTCGCGCTGCGCATCCGCGTACCGATCGCCGCCGCGCTGGCGGGTGCGCTTGCCGGCATTGCCTACACCCTCAT
CACCGGGGCCGAAGTGCCCACCATCCGTTCGTGCATAGGGGCCCTGCTCGTGCTCGCGGCACTTGCGCTCGGGCGTGATC
CGCTCTCGCTGCGCATGGTCGCGGTCGGTGCCCTTGTCGTCATGCTGTTCTGGCCGGAAGCCGTGTTCGGGCCCAGTTTC
CAGATGAGCTTTGCTGCGGTGATCGCCATCGTCGCCTTCCATTCCGCCGCGCCCGTCCGCGGATTTCTCGCCGGCGAACG
ACATGGGGGCCTGGCGCGGCTTGCCCGCAACGTCCTGCTTCTGCTGGCAACCGGCCTGGTCATCGAACTCGCGCTCATGC
CCATCGGCCTGTTCCACTTCCACCGGGCGGGCGTCTACGGATCGCTGGCCAATGTCATTGCCATCCCGCTCACCACATTC
GTGACCATGCCGCTGATCGGCATCGCGCTGCTTCTCGACCTTGCCGGGCTGGGTGGACCCGCGTGGTGGCTCGTCGAAAC
GTCGCTGGATCTTCTGCTGGCACTCGCGCACTTCGTCGCCGACCGGCCGGGGGCGGTCACCATGCTGCCGCCGGGGGATC
GGTGGAGCTACCTCGTCTTTGTCGCCGGAATGCTGTGGCTGGCGCTCTGGACCGGCCGCGTCAGGCTGTGGGGCCTCCTG
CCCGCATTCGCCGCAGCGCTTTCCATGGCGCTGACGCCCACGCCCGACATCCTCGTCACCGGGGACGGCCGGCATGTCGC
CATCGCGGGCGAGGGGGCGGAACTCCTAGTCCTGAGAGCGGGGCGGGGAGACTTCATCCGCGAAAATCTTCTGGAACTGG
CCGGAATGGAGGGGGAGACGCGCCCCCTCGACGAGTGGCGTGGTGCGCGCTGCGGTGAAGATTTCTGTGCCGCGTCGCTC
ATGCGGGGCGGACGCCACTTTGCTATTCTCATGGCCCGCAGCCGCAACGACGTCGACGAGATGGACATTGCCGCCGCCTG
CGAGCGAAGCGACATCGTGATCGCCGACCGTCGCCTGCCGCACACCTGCCGCCCGAAGCTGCTCAAGGCAGACCGCGCGT
TCCTCGCAATGACCGGCGGCCTCTCCATCGACCTAAGCCGCCGCCGGACAAGGACAGTCGCCGAAACGCAAGGTCGGCAA
GGGTGGTACCGATGGTCAGAACCATCCGCCACTTTGTCGCCCCAACCGAGGGGTACTCAGGCCGAACGCCGGGACATGGC
TCCGGAGACGAGGCATCGGTCCATGCCAACGACAGCGCGCTAG

Upstream 100 bases:

>100_bases
GGGGCGAAACGGGTGACGACCTTGTCCCGGGGCGTCGATCCTGCAGAAACGGTGTCAGTGGCGCTTGCCATCTGCCGCGC
TTTCCTTCCCTTTGAAATCC

Downstream 100 bases:

>100_bases
ACCTCGCTAACGGACGGATGCCAGACAGGCCCTGCAAACGGGCCGGCCGAAGCGCAACCCCGCACGGTTCGGCCCCGTGA
CCGGAGCCCTGCGTCAGGAA

Product: ComEC/Rec2-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 760; Mature: 760

Protein sequence:

>760_residues
MVSPAEVGPAAGFPAADPDALPARRARHWDIRARLSSMLDDGEAFLAAHPFERGLWLVVSFGAGIVCWLALPLSVQWTAT
LLACGSAALISLLYVDEHRLPYIRLGIAGVAIMLAAGMATVWTKSALVGQPGIGRPMVTTVVGTVLDRREEPARERSRLL
LLTRLPEFPDPVRVRVNLPKDEDRPFIVEGATLALRARLMPPAPPMLPGAYDFARKAWFDGIAATGTVMDDVRLVSPSGN
ATTLRKIQRALADHVRSRLAGSAGAIAAAFASGDRGAIAKADEDAMRDAGLTHLLSISGLHVSALVGAVYWIFARSLALV
PWVALRIRVPIAAALAGALAGIAYTLITGAEVPTIRSCIGALLVLAALALGRDPLSLRMVAVGALVVMLFWPEAVFGPSF
QMSFAAVIAIVAFHSAAPVRGFLAGERHGGLARLARNVLLLLATGLVIELALMPIGLFHFHRAGVYGSLANVIAIPLTTF
VTMPLIGIALLLDLAGLGGPAWWLVETSLDLLLALAHFVADRPGAVTMLPPGDRWSYLVFVAGMLWLALWTGRVRLWGLL
PAFAAALSMALTPTPDILVTGDGRHVAIAGEGAELLVLRAGRGDFIRENLLELAGMEGETRPLDEWRGARCGEDFCAASL
MRGGRHFAILMARSRNDVDEMDIAAACERSDIVIADRRLPHTCRPKLLKADRAFLAMTGGLSIDLSRRRTRTVAETQGRQ
GWYRWSEPSATLSPQPRGTQAERRDMAPETRHRSMPTTAR

Sequences:

>Translated_760_residues
MVSPAEVGPAAGFPAADPDALPARRARHWDIRARLSSMLDDGEAFLAAHPFERGLWLVVSFGAGIVCWLALPLSVQWTAT
LLACGSAALISLLYVDEHRLPYIRLGIAGVAIMLAAGMATVWTKSALVGQPGIGRPMVTTVVGTVLDRREEPARERSRLL
LLTRLPEFPDPVRVRVNLPKDEDRPFIVEGATLALRARLMPPAPPMLPGAYDFARKAWFDGIAATGTVMDDVRLVSPSGN
ATTLRKIQRALADHVRSRLAGSAGAIAAAFASGDRGAIAKADEDAMRDAGLTHLLSISGLHVSALVGAVYWIFARSLALV
PWVALRIRVPIAAALAGALAGIAYTLITGAEVPTIRSCIGALLVLAALALGRDPLSLRMVAVGALVVMLFWPEAVFGPSF
QMSFAAVIAIVAFHSAAPVRGFLAGERHGGLARLARNVLLLLATGLVIELALMPIGLFHFHRAGVYGSLANVIAIPLTTF
VTMPLIGIALLLDLAGLGGPAWWLVETSLDLLLALAHFVADRPGAVTMLPPGDRWSYLVFVAGMLWLALWTGRVRLWGLL
PAFAAALSMALTPTPDILVTGDGRHVAIAGEGAELLVLRAGRGDFIRENLLELAGMEGETRPLDEWRGARCGEDFCAASL
MRGGRHFAILMARSRNDVDEMDIAAACERSDIVIADRRLPHTCRPKLLKADRAFLAMTGGLSIDLSRRRTRTVAETQGRQ
GWYRWSEPSATLSPQPRGTQAERRDMAPETRHRSMPTTAR
>Mature_760_residues
MVSPAEVGPAAGFPAADPDALPARRARHWDIRARLSSMLDDGEAFLAAHPFERGLWLVVSFGAGIVCWLALPLSVQWTAT
LLACGSAALISLLYVDEHRLPYIRLGIAGVAIMLAAGMATVWTKSALVGQPGIGRPMVTTVVGTVLDRREEPARERSRLL
LLTRLPEFPDPVRVRVNLPKDEDRPFIVEGATLALRARLMPPAPPMLPGAYDFARKAWFDGIAATGTVMDDVRLVSPSGN
ATTLRKIQRALADHVRSRLAGSAGAIAAAFASGDRGAIAKADEDAMRDAGLTHLLSISGLHVSALVGAVYWIFARSLALV
PWVALRIRVPIAAALAGALAGIAYTLITGAEVPTIRSCIGALLVLAALALGRDPLSLRMVAVGALVVMLFWPEAVFGPSF
QMSFAAVIAIVAFHSAAPVRGFLAGERHGGLARLARNVLLLLATGLVIELALMPIGLFHFHRAGVYGSLANVIAIPLTTF
VTMPLIGIALLLDLAGLGGPAWWLVETSLDLLLALAHFVADRPGAVTMLPPGDRWSYLVFVAGMLWLALWTGRVRLWGLL
PAFAAALSMALTPTPDILVTGDGRHVAIAGEGAELLVLRAGRGDFIRENLLELAGMEGETRPLDEWRGARCGEDFCAASL
MRGGRHFAILMARSRNDVDEMDIAAACERSDIVIADRRLPHTCRPKLLKADRAFLAMTGGLSIDLSRRRTRTVAETQGRQ
GWYRWSEPSATLSPQPRGTQAERRDMAPETRHRSMPTTAR

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ComEC, N.gonorrhoeae ComA, and H.influenzae Rec2 [H]

Homologues:

Organism=Escherichia coli, GI87081801, Length=353, Percent_Identity=28.0453257790368, Blast_Score=93, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR004477
- InterPro:   IPR004797 [H]

Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 81488; Mature: 81488

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSPAEVGPAAGFPAADPDALPARRARHWDIRARLSSMLDDGEAFLAAHPFERGLWLVVS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEE
FGAGIVCWLALPLSVQWTATLLACGSAALISLLYVDEHRLPYIRLGIAGVAIMLAAGMAT
CCCHHEEHHHHCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHH
VWTKSALVGQPGIGRPMVTTVVGTVLDRREEPARERSRLLLLTRLPEFPDPVRVRVNLPK
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCEEEEEECCC
DEDRPFIVEGATLALRARLMPPAPPMLPGAYDFARKAWFDGIAATGTVMDDVRLVSPSGN
CCCCCEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHCCCCEECCEEEECCCCC
ATTLRKIQRALADHVRSRLAGSAGAIAAAFASGDRGAIAKADEDAMRDAGLTHLLSISGL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHCCCC
HVSALVGAVYWIFARSLALVPWVALRIRVPIAAALAGALAGIAYTLITGAEVPTIRSCIG
HHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALLVLAALALGRDPLSLRMVAVGALVVMLFWPEAVFGPSFQMSFAAVIAIVAFHSAAPVR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCCH
GFLAGERHGGLARLARNVLLLLATGLVIELALMPIGLFHFHRAGVYGSLANVIAIPLTTF
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VTMPLIGIALLLDLAGLGGPAWWLVETSLDLLLALAHFVADRPGAVTMLPPGDRWSYLVF
HHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH
VAGMLWLALWTGRVRLWGLLPAFAAALSMALTPTPDILVTGDGRHVAIAGEGAELLVLRA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCEEEEEEC
GRGDFIRENLLELAGMEGETRPLDEWRGARCGEDFCAASLMRGGRHFAILMARSRNDVDE
CCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHH
MDIAAACERSDIVIADRRLPHTCRPKLLKADRAFLAMTGGLSIDLSRRRTRTVAETQGRQ
HHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHCCCC
GWYRWSEPSATLSPQPRGTQAERRDMAPETRHRSMPTTAR
CCEEECCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MVSPAEVGPAAGFPAADPDALPARRARHWDIRARLSSMLDDGEAFLAAHPFERGLWLVVS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEE
FGAGIVCWLALPLSVQWTATLLACGSAALISLLYVDEHRLPYIRLGIAGVAIMLAAGMAT
CCCHHEEHHHHCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHH
VWTKSALVGQPGIGRPMVTTVVGTVLDRREEPARERSRLLLLTRLPEFPDPVRVRVNLPK
HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCEEEEEECCC
DEDRPFIVEGATLALRARLMPPAPPMLPGAYDFARKAWFDGIAATGTVMDDVRLVSPSGN
CCCCCEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHCCCCEECCEEEECCCCC
ATTLRKIQRALADHVRSRLAGSAGAIAAAFASGDRGAIAKADEDAMRDAGLTHLLSISGL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHCCCC
HVSALVGAVYWIFARSLALVPWVALRIRVPIAAALAGALAGIAYTLITGAEVPTIRSCIG
HHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ALLVLAALALGRDPLSLRMVAVGALVVMLFWPEAVFGPSFQMSFAAVIAIVAFHSAAPVR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCCCH
GFLAGERHGGLARLARNVLLLLATGLVIELALMPIGLFHFHRAGVYGSLANVIAIPLTTF
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VTMPLIGIALLLDLAGLGGPAWWLVETSLDLLLALAHFVADRPGAVTMLPPGDRWSYLVF
HHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH
VAGMLWLALWTGRVRLWGLLPAFAAALSMALTPTPDILVTGDGRHVAIAGEGAELLVLRA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCEEEEEEC
GRGDFIRENLLELAGMEGETRPLDEWRGARCGEDFCAASLMRGGRHFAILMARSRNDVDE
CCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHH
MDIAAACERSDIVIADRRLPHTCRPKLLKADRAFLAMTGGLSIDLSRRRTRTVAETQGRQ
HHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCEEEEEECCCEEEECHHHHHHHHHHCCCC
GWYRWSEPSATLSPQPRGTQAERRDMAPETRHRSMPTTAR
CCEEECCCCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8094880 [H]