| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is grxC [H]
Identifier: 87200029
GI number: 87200029
Start: 2145858
End: 2146124
Strand: Reverse
Name: grxC [H]
Synonym: Saro_2013
Alternate gene names: 87200029
Gene position: 2146124-2145858 (Counterclockwise)
Preceding gene: 87200032
Following gene: 87200028
Centisome position: 60.26
GC content: 62.17
Gene sequence:
>267_bases ATGCCCAATATGCCCAAGGTTGAAATGTACACCAAGTGGGGCTGCCCCTACTGCTTTCGCGCCAAGCAACTGCTGGACGG CAAGGGCGTATCCTACGAGGAAATCGACGTGACGATGGGCGGGCCGAAGAAGACCGAGATGCTCGAGCGCGCGCCAGGGC ACACCACCGTTCCCTCGATCTTCATCGACGGCCTCCACGTGGGCGGTTCCGATGACCTCGCCGCGCTCAACGCGCAGGGC AAGCTGGACATGATGCTGGGCCTGTGA
Upstream 100 bases:
>100_bases GCCCCGGCGGTTGATGGCCATGCCCGACTTGCGGCGCATGACACGCCAACCCATGTGTGTTAGCGATTTTCCCATTTCAA GACCCCAGTTCGAGGTACCG
Downstream 100 bases:
>100_bases GCAGCGGCGCACCGCGGGGACCTGCCAAGGTCGCGCTGTTCCAGATGACCAGCGGCATCGATCCGCTGGTCAATGCCGCC GCCATCGTGGATGCCGCGAC
Product: glutaredoxin GrxC
Products: NA
Alternate protein names: Grx3 [H]
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MPNMPKVEMYTKWGCPYCFRAKQLLDGKGVSYEEIDVTMGGPKKTEMLERAPGHTTVPSIFIDGLHVGGSDDLAALNAQG KLDMMLGL
Sequences:
>Translated_88_residues MPNMPKVEMYTKWGCPYCFRAKQLLDGKGVSYEEIDVTMGGPKKTEMLERAPGHTTVPSIFIDGLHVGGSDDLAALNAQG KLDMMLGL >Mature_87_residues PNMPKVEMYTKWGCPYCFRAKQLLDGKGVSYEEIDVTMGGPKKTEMLERAPGHTTVPSIFIDGLHVGGSDDLAALNAQGK LDMMLGL
Specific function: The disulfide bond functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. In addition, it is also involved in reducing some disulfides in a coupled system with glutathione re
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutaredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790039, Length=83, Percent_Identity=55.421686746988, Blast_Score=96, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011767 - InterPro: IPR002109 - InterPro: IPR014025 - InterPro: IPR011900 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00462 Glutaredoxin [H]
EC number: NA
Molecular weight: Translated: 9603; Mature: 9472
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNMPKVEMYTKWGCPYCFRAKQLLDGKGVSYEEIDVTMGGPKKTEMLERAPGHTTVPSI CCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCEE FIDGLHVGGSDDLAALNAQGKLDMMLGL EECCEEECCCCCEEEECCCCCEEEEECC >Mature Secondary Structure PNMPKVEMYTKWGCPYCFRAKQLLDGKGVSYEEIDVTMGGPKKTEMLERAPGHTTVPSI CCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCEE FIDGLHVGGSDDLAALNAQGKLDMMLGL EECCEEECCCCCEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]