| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199886
Identifier: 87199886
GI number: 87199886
Start: 1971767
End: 1972300
Strand: Direct
Name: 87199886
Synonym: Saro_1869
Alternate gene names: NA
Gene position: 1971767-1972300 (Clockwise)
Preceding gene: 87199885
Following gene: 87199887
Centisome position: 55.36
GC content: 61.8
Gene sequence:
>534_bases ATGCCTGAAGCGGCGCACACGGAATTCTGGAAGGACATCAAGCCGGTCGACAAGGTTTTCCGCGAAGGCGGGCTTCCGGA AGTCTACATGCCCAAGATCGCCGAGGGCGACGAGCGGTACTGGGTACCGATCTCGGAGACGGTGTTTTCGAAGCCCGTCT GGATCAGCCCGGCCAAGAACATGTGGGCCGACGTGCTGATGAGCAAGAAGGCGGGCCTGGTGAACCGCCACTATCACCCG CATCCCATCTGGGCCTACACGATCAGCGGCAAGTGGGCCTACCTCGAGCATAGCTGGACCGCGACCGCTGGCGACTTCGT CTACGAGACGCCGGGCGAGAGCCATACGCTGGTCTGCTATGAGCACGAGGATCCGATGAAGGTGTTCTTCGTCGTCTCGG GGCCGCTCATGTGGCTCGACGAGGAAGGCAACACGGTCGGCCACTACGACGTGTTCGACTACATGAAGGCCGCGCGCGAG CACTATGACAAGGTCGGCATCGGCGCCGATTACGTCGACACCCTGATCCGCTGA
Upstream 100 bases:
>100_bases GTCAGGCTCGGTTTCGAGTTCTGATGATGTGAACGGATGCGCGGGCGGGGGCGTTTTCCCCGCGGTCCCGCCCGCGCACC GTAATGCTTGGAGAGAGACG
Downstream 100 bases:
>100_bases AAACGATACCTAGAGGACGCCTGACATGACCGTGATGACCGCACCGCCTTCCGACAAGGCAGAAATCGTCGATGTGCCTT TCGCTCACAAGGAGCTGGTC
Product: 2,4'-dihydroxyacetophenone dioxygenase
Products: NA
Alternate protein names: Cupin 2 Barrel; 2 4-Dihydroxyacetophenone Dioxygenase; Cupin 2 Conserved Barrel; Cupin 2 Protein; Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPEAAHTEFWKDIKPVDKVFREGGLPEVYMPKIAEGDERYWVPISETVFSKPVWISPAKNMWADVLMSKKAGLVNRHYHP HPIWAYTISGKWAYLEHSWTATAGDFVYETPGESHTLVCYEHEDPMKVFFVVSGPLMWLDEEGNTVGHYDVFDYMKAARE HYDKVGIGADYVDTLIR
Sequences:
>Translated_177_residues MPEAAHTEFWKDIKPVDKVFREGGLPEVYMPKIAEGDERYWVPISETVFSKPVWISPAKNMWADVLMSKKAGLVNRHYHP HPIWAYTISGKWAYLEHSWTATAGDFVYETPGESHTLVCYEHEDPMKVFFVVSGPLMWLDEEGNTVGHYDVFDYMKAARE HYDKVGIGADYVDTLIR >Mature_176_residues PEAAHTEFWKDIKPVDKVFREGGLPEVYMPKIAEGDERYWVPISETVFSKPVWISPAKNMWADVLMSKKAGLVNRHYHPH PIWAYTISGKWAYLEHSWTATAGDFVYETPGESHTLVCYEHEDPMKVFFVVSGPLMWLDEEGNTVGHYDVFDYMKAAREH YDKVGIGADYVDTLIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20444; Mature: 20313
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEAAHTEFWKDIKPVDKVFREGGLPEVYMPKIAEGDERYWVPISETVFSKPVWISPAKN CCCCHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCEEEEECHHHHHCCCEEECCHHH MWADVLMSKKAGLVNRHYHPHPIWAYTISGKWAYLEHSWTATAGDFVYETPGESHTLVCY HHHHHHHHHCCCHHCCCCCCCCEEEEEECCEEEEEECCCCCCCCCEEEECCCCCCEEEEE EHEDPMKVFFVVSGPLMWLDEEGNTVGHYDVFDYMKAAREHYDKVGIGADYVDTLIR ECCCCEEEEEEEECCEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure PEAAHTEFWKDIKPVDKVFREGGLPEVYMPKIAEGDERYWVPISETVFSKPVWISPAKN CCCHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCCEEEEECHHHHHCCCEEECCHHH MWADVLMSKKAGLVNRHYHPHPIWAYTISGKWAYLEHSWTATAGDFVYETPGESHTLVCY HHHHHHHHHCCCHHCCCCCCCCEEEEEECCEEEEEECCCCCCCCCEEEECCCCCCEEEEE EHEDPMKVFFVVSGPLMWLDEEGNTVGHYDVFDYMKAAREHYDKVGIGADYVDTLIR ECCCCEEEEEEEECCEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA