| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199887
Identifier: 87199887
GI number: 87199887
Start: 1972326
End: 1972862
Strand: Direct
Name: 87199887
Synonym: Saro_1870
Alternate gene names: NA
Gene position: 1972326-1972862 (Clockwise)
Preceding gene: 87199886
Following gene: 87199888
Centisome position: 55.38
GC content: 61.64
Gene sequence:
>537_bases ATGACCGTGATGACCGCACCGCCTTCCGACAAGGCAGAAATCGTCGATGTGCCTTTCGCTCACAAGGAGCTGGTCAAGCG TCTGAGCCCCGGTGGACGCTACATCGACGCACAGACCGACGTCGACAGCCCGTGGGTTCCCTTCGGTGAGAATGCCGCGA TCAAGCACCTGGCGTTCGACGTCCGGCAGAACCTGTTCTCGAACATCCTCTGGGTGAAGGGGCCGGGCGTGATCGGCACG CACTTCCACCGCGGCACGATCACCATGGTCTGCCTCGAGGGCAGTGTGCGCTATCTCGAGTATGACTGGGTGGCGACGCC GGGCGGGCTGATCCTCGAAACGCCGGGCGAGAGCCATACCCTCGTCACCGATCATCCGCAGGGCTGCAAGCTGTTCGGAT GGATGCAGGGTCCGATCGAGTTCTACGACGAGAACGCGGTGCTGATCGACACCACCGACGTCTGGTGGTTCATCAACCAC TACGAGACCTACTGCCGCGAGAACGGCATCGCCATCAACCCCAAGCTCTATCTCTGA
Upstream 100 bases:
>100_bases TACATGAAGGCCGCGCGCGAGCACTATGACAAGGTCGGCATCGGCGCCGATTACGTCGACACCCTGATCCGCTGAAAACG ATACCTAGAGGACGCCTGAC
Downstream 100 bases:
>100_bases GGCCGCCATGGGCACGATGAAGGCGCCTCCTTCGGGCGCATACAAGATCGTCAGCGTCCCCGAACTCTACGGGGACCTGA TCCGGGCGAAGGGCGTCGAG
Product: 2,4'-dihydroxyacetophenone dioxygenase
Products: NA
Alternate protein names: Cupin 2 Barrel; Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin 2 Protein; Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MTVMTAPPSDKAEIVDVPFAHKELVKRLSPGGRYIDAQTDVDSPWVPFGENAAIKHLAFDVRQNLFSNILWVKGPGVIGT HFHRGTITMVCLEGSVRYLEYDWVATPGGLILETPGESHTLVTDHPQGCKLFGWMQGPIEFYDENAVLIDTTDVWWFINH YETYCRENGIAINPKLYL
Sequences:
>Translated_178_residues MTVMTAPPSDKAEIVDVPFAHKELVKRLSPGGRYIDAQTDVDSPWVPFGENAAIKHLAFDVRQNLFSNILWVKGPGVIGT HFHRGTITMVCLEGSVRYLEYDWVATPGGLILETPGESHTLVTDHPQGCKLFGWMQGPIEFYDENAVLIDTTDVWWFINH YETYCRENGIAINPKLYL >Mature_177_residues TVMTAPPSDKAEIVDVPFAHKELVKRLSPGGRYIDAQTDVDSPWVPFGENAAIKHLAFDVRQNLFSNILWVKGPGVIGTH FHRGTITMVCLEGSVRYLEYDWVATPGGLILETPGESHTLVTDHPQGCKLFGWMQGPIEFYDENAVLIDTTDVWWFINHY ETYCRENGIAINPKLYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20079; Mature: 19948
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVMTAPPSDKAEIVDVPFAHKELVKRLSPGGRYIDAQTDVDSPWVPFGENAAIKHLAFD CEEEECCCCCCCEEEECCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHH VRQNLFSNILWVKGPGVIGTHFHRGTITMVCLEGSVRYLEYDWVATPGGLILETPGESHT HHHHHHHCEEEEECCCEEEEEEECCEEEEEEECCCEEEEEEEEEECCCCEEEECCCCCCE LVTDHPQGCKLFGWMQGPIEFYDENAVLIDTTDVWWFINHYETYCRENGIAINPKLYL EEECCCCCCEEEEEECCCEEEECCCEEEEECCCEEEEEHHHHHHHHCCCEEECCEEEC >Mature Secondary Structure TVMTAPPSDKAEIVDVPFAHKELVKRLSPGGRYIDAQTDVDSPWVPFGENAAIKHLAFD EEEECCCCCCCEEEECCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHH VRQNLFSNILWVKGPGVIGTHFHRGTITMVCLEGSVRYLEYDWVATPGGLILETPGESHT HHHHHHHCEEEEECCCEEEEEEECCEEEEEEECCCEEEEEEEEEECCCCEEEECCCCCCE LVTDHPQGCKLFGWMQGPIEFYDENAVLIDTTDVWWFINHYETYCRENGIAINPKLYL EEECCCCCCEEEEEECCCEEEECCCEEEEECCCEEEEEHHHHHHHHCCCEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA