Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is sam [H]

Identifier: 87199874

GI number: 87199874

Start: 1957674

End: 1958576

Strand: Direct

Name: sam [H]

Synonym: Saro_1857

Alternate gene names: 87199874

Gene position: 1957674-1958576 (Clockwise)

Preceding gene: 87199872

Following gene: 87199880

Centisome position: 54.97

GC content: 65.56

Gene sequence:

>903_bases
TTGCAAGACAGTCACAGATCCGCGCTGATTTTCGCGCTTCTCGGCTTTGCCCTGCTTTCGGTCGGCGATGCGGTGGTCAA
GAGTATGGCGGGCATGTGGCCGGGAACCGCGATCGGCGCGCTGCGCTACGTCTTCGGCGCAGTCGGCCTGGGGATCGTAC
TGCTGCTTCGCGAAGGGCCTTCGGGCTTCGCGTTTCCGAAGCCGCGCTGGCAGGTGTTGCGGGGCTTCTGCGTGGCGATG
TCGGCCATGTCGTTCTTCAGCGCCGTGCACCTGATGCCGATTGGAGAGGCGACCGCGATTTCCTTTACGAGCCCGATGAT
TACGGCGCTTCTTGCAGCAGTGCTGCTAAAGGAGCCGCTGCGACGCGAGACCTGGATCGCCAGCATCGTGGCATTCGGCG
GCGTGCTGCTGATCCTGCGCCCGAACTTCGGCCTGCTGGGCCTTGCAGCGCTGCTGCCCATGGTCTCCGCGACGGGGATG
GCGCTGCTCATTATCGCGAACCGCAAGGTGGCCGGAATGGGGAGCGCGCTTTCGATGCAGTTCAACGTCGCGCTGATCGG
CAGCCTGTTCCTTTGCATCGCCACATTGTCCGGCCATTTCAGCGGGGTGGCCTTCTTCGCGGTCCAGGTTCCGGCAATGT
CCGTGATCGCCAAGTGCGCGCTCATCGCGGTCAGTGCCAGCACGGCCCATGCGCTTATCTACATGGCGACGACGCGTGCC
GGCGCAGCCACGATCGCGCCGATGACCTACGTCCAGCTTCTCATGGCCGGTGTGCTGGGCTGGGGCCTGTTCGGCGAGCG
GCCGGACGGGGTTGCGGCTGCCGGGGCGGTCATCATCGTGGGCGCGGGGCTCTACCTGTGGAGAGCGGGCCGCGCACCCG
AAGAGCCGACGATGACCGACTGA

Upstream 100 bases:

>100_bases
TTTCTGTGTGGAGCGAGAAGTCGAAGGCGACTAGAGCCCCTGCCGGGGATGTAACAATCGGCAGCCGGTGCCCTCCGGCG
CTTTCCAGGGAACGTCGCGC

Downstream 100 bases:

>100_bases
TTGTGAATGAATACAGCACTTCAAGGCGGAAATGCGGGTGAATGACCCGAACGGCACCTAAAAGCACCTAAAAGCACCTA
ACCACACGCGGCGGCGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MQDSHRSALIFALLGFALLSVGDAVVKSMAGMWPGTAIGALRYVFGAVGLGIVLLLREGPSGFAFPKPRWQVLRGFCVAM
SAMSFFSAVHLMPIGEATAISFTSPMITALLAAVLLKEPLRRETWIASIVAFGGVLLILRPNFGLLGLAALLPMVSATGM
ALLIIANRKVAGMGSALSMQFNVALIGSLFLCIATLSGHFSGVAFFAVQVPAMSVIAKCALIAVSASTAHALIYMATTRA
GAATIAPMTYVQLLMAGVLGWGLFGERPDGVAAAGAVIIVGAGLYLWRAGRAPEEPTMTD

Sequences:

>Translated_300_residues
MQDSHRSALIFALLGFALLSVGDAVVKSMAGMWPGTAIGALRYVFGAVGLGIVLLLREGPSGFAFPKPRWQVLRGFCVAM
SAMSFFSAVHLMPIGEATAISFTSPMITALLAAVLLKEPLRRETWIASIVAFGGVLLILRPNFGLLGLAALLPMVSATGM
ALLIIANRKVAGMGSALSMQFNVALIGSLFLCIATLSGHFSGVAFFAVQVPAMSVIAKCALIAVSASTAHALIYMATTRA
GAATIAPMTYVQLLMAGVLGWGLFGERPDGVAAAGAVIIVGAGLYLWRAGRAPEEPTMTD
>Mature_300_residues
MQDSHRSALIFALLGFALLSVGDAVVKSMAGMWPGTAIGALRYVFGAVGLGIVLLLREGPSGFAFPKPRWQVLRGFCVAM
SAMSFFSAVHLMPIGEATAISFTSPMITALLAAVLLKEPLRRETWIASIVAFGGVLLILRPNFGLLGLAALLPMVSATGM
ALLIIANRKVAGMGSALSMQFNVALIGSLFLCIATLSGHFSGVAFFAVQVPAMSVIAKCALIAVSASTAHALIYMATTRA
GAATIAPMTYVQLLMAGVLGWGLFGERPDGVAAAGAVIIVGAGLYLWRAGRAPEEPTMTD

Specific function: Transports S-adenosylmethionine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31131; Mature: 31131

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSHRSALIFALLGFALLSVGDAVVKSMAGMWPGTAIGALRYVFGAVGLGIVLLLREGP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCC
SGFAFPKPRWQVLRGFCVAMSAMSFFSAVHLMPIGEATAISFTSPMITALLAAVLLKEPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCHHHHHHHHHHHHHHHHH
RRETWIASIVAFGGVLLILRPNFGLLGLAALLPMVSATGMALLIIANRKVAGMGSALSMQ
HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHEEE
FNVALIGSLFLCIATLSGHFSGVAFFAVQVPAMSVIAKCALIAVSASTAHALIYMATTRA
EHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHEEEEEEEECCC
GAATIAPMTYVQLLMAGVLGWGLFGERPDGVAAAGAVIIVGAGLYLWRAGRAPEEPTMTD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHEEEECHHHEEECCCCCCCCCCCC
>Mature Secondary Structure
MQDSHRSALIFALLGFALLSVGDAVVKSMAGMWPGTAIGALRYVFGAVGLGIVLLLREGP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCC
SGFAFPKPRWQVLRGFCVAMSAMSFFSAVHLMPIGEATAISFTSPMITALLAAVLLKEPL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCHHHHHHHHHHHHHHHHH
RRETWIASIVAFGGVLLILRPNFGLLGLAALLPMVSATGMALLIIANRKVAGMGSALSMQ
HHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHEEE
FNVALIGSLFLCIATLSGHFSGVAFFAVQVPAMSVIAKCALIAVSASTAHALIYMATTRA
EHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHEEEEEEEECCC
GAATIAPMTYVQLLMAGVLGWGLFGERPDGVAAAGAVIIVGAGLYLWRAGRAPEEPTMTD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHEEEECHHHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA