| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is bglX [H]
Identifier: 87199628
GI number: 87199628
Start: 1679091
End: 1681526
Strand: Direct
Name: bglX [H]
Synonym: Saro_1611
Alternate gene names: 87199628
Gene position: 1679091-1681526 (Clockwise)
Preceding gene: 87199627
Following gene: 87199630
Centisome position: 47.14
GC content: 66.54
Gene sequence:
>2436_bases ATGCCGATGCGAGCACACCTGCGGGGCCTGGCGCTAATCCTGCTGACCGGCAGCAGCCTCGCCGCAGCAGCCGACCGGGT TGATGTCCAGGCGGCGCCTTCAGGCATTGCCAACCCTGCGGCGTGGCCCGCCGCGCACAGCCCATCCGCCATCACCGACC CCGCGACGGAGCGGGCAATTACCCGCATTCTCAAGCGCATGACGCTGGAGCAGAAGGTGGGGCAAGTCATCCAGGGCGAC ATCAGCTCGATCACGCCTGCCGATCTGGAGCGATATCCGCTGGGCTCGATCCTCGCTGGCGGGAACAGCGGCCCCTACGG CAACGAACGCGCCGACGCCGCCACCTGGCTGCGCCTCGTCAACGAATTCCGCGCAGCTTCGCGCAAGGCGGGGGCGGGGG TGCCGATCCTGTTCGGTGTCGATGCCGTCCACGGCCACTCCAACATTCCCGGAGCGACGATCTTCCCGCACAACGTCGGC CTCGGCGCGACACGCGATGCGGATCTGATCCGCCGGATCGGCCAGGCAACCGCTGCCGAGGTGGCGGGGTCGGGTATCGA GTGGACCTTTGCGCCGACCCTGGCGGTGCCTCAAGACTTGCGCTGGGGGCGCGCGTACGAGGGCTATTCAAGCGATCCGC AGGTCATCGCCCGCTACGCTCCGGCGATGGTAGAGGGCCTTCAGGGCACTTTAGGTGCCGTTCGGGTCTTGCCGTCGAAC CGCGTCGCGGCAAGTGCGAAGCACTTTCTGGCCGATGGCGGGACCGAGAACGGCAAGGATCAGGGTGATGCCAAGCTCTC TGAAGCCGACCTCGTGCGTATTCACGCACAGGGCTATCCCCCCGCCATCGATGCCGGTGCGCTGACGGTAATGGCAAGCT TTTCAAGCTGGAACGGGATCAAGAACCACGGCAACCGCTCGCTCCTGACCGATGTCCTCAAGAAGCGCATGGGTTTCGAG GGGCTGGTCGTGGGTGACTGGAACGGTCATGGTCAGATTCCGGGATGCACCACCACCGATTGCCCGTCGGCCCTCAACGC CGGCCTCGATCTCTACATGGCGCCCGATAGCTGGAAAGGCTTGTTCGACAATACCTTGCGGGAGGTTCGTGAAGGGAAGA TCAGCAAGACCCGGCTGGACGACGCCGTACGCCGCATCCTGCGCGTGAAATTCAAGCTGGGTCTGATGGGGCCCAGACTG GTCGAGCGCGGCGATCCCGCGGCGGTTGGCGCCGATGCCCATCTCGAAATCGCGCGGGAAGCAGTCGCCAAGTCATTGGT CTTGCTCAAGAATGAGGGTGGCGTCTTGCCCATCCGTCCCGGTGCGAGGGTGCTGGTCACCGGGCCCGGGGCCGACAACA TGGCAATGCAGGCGGGCGGGTGGACGATCACCTGGCAGGGTACGGACACCAGCGCCGCCGATTTTCCCAAGGGCCGCACC ATCGGTCGGGCGATCTCGGAGACTGTCGCCGAGGCCGGGGGCAAGGCGGAGATTGCTTCCGATCTGCCTCCGGGGGCCAT GCCCGATGTCGCGGTCGTCGTTTTCGGTGAGCAACCCTACGCCGAATTCCAGGGTGATGTGCCGAACCTCGATTTTCACG CGCGGGCGGGTGAACTGGACCTGATCAAGCGTCTGAAAGCGCGGGGTATTCCCGTAGTGGCCCTGTTCCTTTCCGGGCGT CCGATGTTCGTCGGGCCTGAAATGAACCTTGCCGACGCATTCGTGGCGGCGTGGCAGCCCGGGTCGCAGGGGCAGGGCGT TGCCGACGTCCTCGTTGCGCGCAAGGACGGCAAGCCAGCGCGCGATTTCACTGGCACGTTGCCGTTCGCATGGCCGCAGG ACGCGCGCTCTCCGCTGGTCGATCCGCTTTTCCCGCTGGGCTACGGCCTATCCTATGCAAGGCCGGGCAAGGTCGGTCCG GTGAACGAGGACGCCCGGGTCGAGCACGGGCCAGCCATGAGCGAGACCACCTTCATCCGTCACGGCAAGGTGATCGAGCC GTGGCGGCTGGGCCTGGACAGTGTCGTGTCGACCCGCGCGGTCGACGTTGCCGCACAGGAGGATGCGCGCCAGTTCCGCT GGGCCGGGCAGGGCGCGATCGCGCTCGATGGTCCGCCGGTCGACATGGAGCGCCACCGCAACGGCGGCTTCGTCATGCGG CTGGACTGGCGGATCGATGCGCGCGGAACCGGGCCGGTGACCGTCGCTCTGGGAGGATCGCGGCTCGATGTGACCTCGAT CGTCGATGCCAGCGTGGCGGGCAAGCCGGTGGCGCTACGGATACCGCTTCAGTGCTTTGCCGCGAACGGTGCGACGCTGA AGGAAGTGGGGCAGCCACTGCGCATCGGTGCCGACGCCGGCTTTACCGCAAGCATTCGCAACGCCGGTATCGAAGGCGTG GGCGAAAGCATCCCGTGTCCGCGCCCGGCGCGCTGA
Upstream 100 bases:
>100_bases TCCTCCACGCTTCGTCGCGAAGGCTGAGGCAGGGGTTGATTTCCCCGCAGGGACATGACAAACGACGTTTGAGAACGTTC ACAGAATAATGGGGTAGTCG
Downstream 100 bases:
>100_bases CGCCGGGGAAGCGAGATCAGTTGTCGCAGGCGGAATAGTCGCCCGCGCGGCACGCCGCGACGGCTCGGCGCCACGCCGCC ATGTCGCGTTCGTAGCGGGC
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 811; Mature: 810
Protein sequence:
>811_residues MPMRAHLRGLALILLTGSSLAAAADRVDVQAAPSGIANPAAWPAAHSPSAITDPATERAITRILKRMTLEQKVGQVIQGD ISSITPADLERYPLGSILAGGNSGPYGNERADAATWLRLVNEFRAASRKAGAGVPILFGVDAVHGHSNIPGATIFPHNVG LGATRDADLIRRIGQATAAEVAGSGIEWTFAPTLAVPQDLRWGRAYEGYSSDPQVIARYAPAMVEGLQGTLGAVRVLPSN RVAASAKHFLADGGTENGKDQGDAKLSEADLVRIHAQGYPPAIDAGALTVMASFSSWNGIKNHGNRSLLTDVLKKRMGFE GLVVGDWNGHGQIPGCTTTDCPSALNAGLDLYMAPDSWKGLFDNTLREVREGKISKTRLDDAVRRILRVKFKLGLMGPRL VERGDPAAVGADAHLEIAREAVAKSLVLLKNEGGVLPIRPGARVLVTGPGADNMAMQAGGWTITWQGTDTSAADFPKGRT IGRAISETVAEAGGKAEIASDLPPGAMPDVAVVVFGEQPYAEFQGDVPNLDFHARAGELDLIKRLKARGIPVVALFLSGR PMFVGPEMNLADAFVAAWQPGSQGQGVADVLVARKDGKPARDFTGTLPFAWPQDARSPLVDPLFPLGYGLSYARPGKVGP VNEDARVEHGPAMSETTFIRHGKVIEPWRLGLDSVVSTRAVDVAAQEDARQFRWAGQGAIALDGPPVDMERHRNGGFVMR LDWRIDARGTGPVTVALGGSRLDVTSIVDASVAGKPVALRIPLQCFAANGATLKEVGQPLRIGADAGFTASIRNAGIEGV GESIPCPRPAR
Sequences:
>Translated_811_residues MPMRAHLRGLALILLTGSSLAAAADRVDVQAAPSGIANPAAWPAAHSPSAITDPATERAITRILKRMTLEQKVGQVIQGD ISSITPADLERYPLGSILAGGNSGPYGNERADAATWLRLVNEFRAASRKAGAGVPILFGVDAVHGHSNIPGATIFPHNVG LGATRDADLIRRIGQATAAEVAGSGIEWTFAPTLAVPQDLRWGRAYEGYSSDPQVIARYAPAMVEGLQGTLGAVRVLPSN RVAASAKHFLADGGTENGKDQGDAKLSEADLVRIHAQGYPPAIDAGALTVMASFSSWNGIKNHGNRSLLTDVLKKRMGFE GLVVGDWNGHGQIPGCTTTDCPSALNAGLDLYMAPDSWKGLFDNTLREVREGKISKTRLDDAVRRILRVKFKLGLMGPRL VERGDPAAVGADAHLEIAREAVAKSLVLLKNEGGVLPIRPGARVLVTGPGADNMAMQAGGWTITWQGTDTSAADFPKGRT IGRAISETVAEAGGKAEIASDLPPGAMPDVAVVVFGEQPYAEFQGDVPNLDFHARAGELDLIKRLKARGIPVVALFLSGR PMFVGPEMNLADAFVAAWQPGSQGQGVADVLVARKDGKPARDFTGTLPFAWPQDARSPLVDPLFPLGYGLSYARPGKVGP VNEDARVEHGPAMSETTFIRHGKVIEPWRLGLDSVVSTRAVDVAAQEDARQFRWAGQGAIALDGPPVDMERHRNGGFVMR LDWRIDARGTGPVTVALGGSRLDVTSIVDASVAGKPVALRIPLQCFAANGATLKEVGQPLRIGADAGFTASIRNAGIEGV GESIPCPRPAR >Mature_810_residues PMRAHLRGLALILLTGSSLAAAADRVDVQAAPSGIANPAAWPAAHSPSAITDPATERAITRILKRMTLEQKVGQVIQGDI SSITPADLERYPLGSILAGGNSGPYGNERADAATWLRLVNEFRAASRKAGAGVPILFGVDAVHGHSNIPGATIFPHNVGL GATRDADLIRRIGQATAAEVAGSGIEWTFAPTLAVPQDLRWGRAYEGYSSDPQVIARYAPAMVEGLQGTLGAVRVLPSNR VAASAKHFLADGGTENGKDQGDAKLSEADLVRIHAQGYPPAIDAGALTVMASFSSWNGIKNHGNRSLLTDVLKKRMGFEG LVVGDWNGHGQIPGCTTTDCPSALNAGLDLYMAPDSWKGLFDNTLREVREGKISKTRLDDAVRRILRVKFKLGLMGPRLV ERGDPAAVGADAHLEIAREAVAKSLVLLKNEGGVLPIRPGARVLVTGPGADNMAMQAGGWTITWQGTDTSAADFPKGRTI GRAISETVAEAGGKAEIASDLPPGAMPDVAVVVFGEQPYAEFQGDVPNLDFHARAGELDLIKRLKARGIPVVALFLSGRP MFVGPEMNLADAFVAAWQPGSQGQGVADVLVARKDGKPARDFTGTLPFAWPQDARSPLVDPLFPLGYGLSYARPGKVGPV NEDARVEHGPAMSETTFIRHGKVIEPWRLGLDSVVSTRAVDVAAQEDARQFRWAGQGAIALDGPPVDMERHRNGGFVMRL DWRIDARGTGPVTVALGGSRLDVTSIVDASVAGKPVALRIPLQCFAANGATLKEVGQPLRIGADAGFTASIRNAGIEGVG ESIPCPRPAR
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=654, Percent_Identity=28.7461773700306, Blast_Score=213, Evalue=3e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 85437; Mature: 85306
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMRAHLRGLALILLTGSSLAAAADRVDVQAAPSGIANPAAWPAAHSPSAITDPATERAI CCCHHHHCCEEEEEEECCCHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH TRILKRMTLEQKVGQVIQGDISSITPADLERYPLGSILAGGNSGPYGNERADAATWLRLV HHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHH NEFRAASRKAGAGVPILFGVDAVHGHSNIPGATIFPHNVGLGATRDADLIRRIGQATAAE HHHHHHHHCCCCCCEEEEECEEECCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHH VAGSGIEWTFAPTLAVPQDLRWGRAYEGYSSDPQVIARYAPAMVEGLQGTLGAVRVLPSN HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC RVAASAKHFLADGGTENGKDQGDAKLSEADLVRIHAQGYPPAIDAGALTVMASFSSWNGI CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECHHCCCH KNHGNRSLLTDVLKKRMGFEGLVVGDWNGHGQIPGCTTTDCPSALNAGLDLYMAPDSWKG HHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCH LFDNTLREVREGKISKTRLDDAVRRILRVKFKLGLMGPRLVERGDPAAVGADAHLEIARE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEECCCHHHHHHHH AVAKSLVLLKNEGGVLPIRPGARVLVTGPGADNMAMQAGGWTITWQGTDTSAADFPKGRT HHHHHEEEEECCCCEEEECCCCEEEEECCCCCCCEEECCCEEEEECCCCCCCCCCCCCCH IGRAISETVAEAGGKAEIASDLPPGAMPDVAVVVFGEQPYAEFQGDVPNLDFHARAGELD HHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCHH LIKRLKARGIPVVALFLSGRPMFVGPEMNLADAFVAAWQPGSQGQGVADVLVARKDGKPA HHHHHHHCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCCCHHHEEEECCCCCCC RDFTGTLPFAWPQDARSPLVDPLFPLGYGLSYARPGKVGPVNEDARVEHGPAMSETTFIR CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE HGKVIEPWRLGLDSVVSTRAVDVAAQEDARQFRWAGQGAIALDGPPVDMERHRNGGFVMR CCCEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCEEEE LDWRIDARGTGPVTVALGGSRLDVTSIVDASVAGKPVALRIPLQCFAANGATLKEVGQPL EEEEEECCCCCCEEEEECCCEEEHHHHHHHHCCCCCEEEEECCEEEECCCCCHHHCCCCE RIGADAGFTASIRNAGIEGVGESIPCPRPAR EECCCCCCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PMRAHLRGLALILLTGSSLAAAADRVDVQAAPSGIANPAAWPAAHSPSAITDPATERAI CCHHHHCCEEEEEEECCCHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH TRILKRMTLEQKVGQVIQGDISSITPADLERYPLGSILAGGNSGPYGNERADAATWLRLV HHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHH NEFRAASRKAGAGVPILFGVDAVHGHSNIPGATIFPHNVGLGATRDADLIRRIGQATAAE HHHHHHHHCCCCCCEEEEECEEECCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHH VAGSGIEWTFAPTLAVPQDLRWGRAYEGYSSDPQVIARYAPAMVEGLQGTLGAVRVLPSN HCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC RVAASAKHFLADGGTENGKDQGDAKLSEADLVRIHAQGYPPAIDAGALTVMASFSSWNGI CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECHHCCCH KNHGNRSLLTDVLKKRMGFEGLVVGDWNGHGQIPGCTTTDCPSALNAGLDLYMAPDSWKG HHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCH LFDNTLREVREGKISKTRLDDAVRRILRVKFKLGLMGPRLVERGDPAAVGADAHLEIARE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEECCCHHHHHHHH AVAKSLVLLKNEGGVLPIRPGARVLVTGPGADNMAMQAGGWTITWQGTDTSAADFPKGRT HHHHHEEEEECCCCEEEECCCCEEEEECCCCCCCEEECCCEEEEECCCCCCCCCCCCCCH IGRAISETVAEAGGKAEIASDLPPGAMPDVAVVVFGEQPYAEFQGDVPNLDFHARAGELD HHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCHH LIKRLKARGIPVVALFLSGRPMFVGPEMNLADAFVAAWQPGSQGQGVADVLVARKDGKPA HHHHHHHCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCCCHHHEEEECCCCCCC RDFTGTLPFAWPQDARSPLVDPLFPLGYGLSYARPGKVGPVNEDARVEHGPAMSETTFIR CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE HGKVIEPWRLGLDSVVSTRAVDVAAQEDARQFRWAGQGAIALDGPPVDMERHRNGGFVMR CCCEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCEEEE LDWRIDARGTGPVTVALGGSRLDVTSIVDASVAGKPVALRIPLQCFAANGATLKEVGQPL EEEEEECCCCCCEEEEECCCEEEHHHHHHHHCCCCCEEEEECCEEEECCCCCHHHCCCCE RIGADAGFTASIRNAGIEGVGESIPCPRPAR EECCCCCCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]