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The map label for this gene is ccpA [H]

Identifier: 87199626

GI number: 87199626

Start: 1676725

End: 1677795

Strand: Direct

Name: ccpA [H]

Synonym: Saro_1609

Alternate gene names: 87199626

Gene position: 1676725-1677795 (Clockwise)

Preceding gene: 87199625

Following gene: 87199627

Centisome position: 47.08

GC content: 66.01

Gene sequence:

>1071_bases
ATGGGTCGCAGGCGCCAGGCGGTAACGATCAAGCACGTGGCAGCGGACGCCGGCGTCTCGCTGCAGACGGTCAGCCGCGT
TATCAACAACGAACCCAACGTGCGTCCGGAAATGCGCGAAAAGGTCCAGGCCTCGATCGACCGGCTCGGCTACGTGCCGT
CGATCGCCGCCCAGCGGATGAGCGGATCGCGTTCCTACCTCATACTCGCGCTGAACGACCGCGAGCGCACGATTGCCGAC
TGGCGGGCACGTCAGGGCACCGACTGGGTTGACCAGATGCTGCTCGGCGGGATGCTCGAATGCGCAGAGCACGGTTATCG
CCTGATCTTCGAACTGGTCGATACGCACAACGACCATGTCGAACGCGAGCTGACCGCTGCCATCGCGGCGCTTCAGCCGG
ACGGCGCGATCCTCACGCCGCCGCACTCGGACAATCCCAAGATCCTCGCGGTCCTTGCCCGGCACAAGGTGCCCTTTGCA
AGGATCGGCGCGCAGACCAGCGAAAAGGGCCTGCCGCCGGGCATCCTCGTTTCGATGGACGACGAAGGCGGCGCCCGCAC
CGCGACGCGGCACCTGCTAGATCTCGGACATCGCCGCATCGGCTTCATATCCGGACCTACCGAATATCGCCTCGCGGGGA
AGCGAGTCGAAGGCTGGCGCGCCGAAATGGAGGCGGCAGGGCTCGGTGTCGATGGCCTGCTCGAGGCTGGCGACTTCACC
TACCAGTCTGGCGTGCGGGCTGCGCGCGCCCTGCTGACGAGGCCTGACCGGCCGAGCGCGATCATCGCCAGCAACGACCA
GATGGCGCTTGCCACGGTCGAGATTGCGGACGAACTGGGCCTGTCTATCCCTGCCGACCTTTCGCTGGTCAGTTTCGACA
ATACGCCGCTTGTGCGCTTCACCCGCCCGGCGCTGACTGCCGTGGATCAGCCCATTGCCGATACGACCGCGCGGGCGGTA
AGGATGCTCATCGCCTCACACCGCAAGCCCGATGCCGACATGGGCCCGGTGGTCATGCCGATGGGTTTCGAGATCCGCGG
CTCTACCGCGCCTTTCGGCAAGGGCGGCTAG

Upstream 100 bases:

>100_bases
TTTTCCGAAAAGGATGCAGGTCGATTGGGTCCGCGTCTGGCAAATGCCGCCCGGACCAGATAACGCTGCTTCCGGGAACC
TCAGGGGTAATTGACGCAAG

Downstream 100 bases:

>100_bases
TTTCCCCATGCACGGCCCCTTTGGCGAGCATGACCGTCGCGACCGGCGGTTTCTCGCCCTTTACGCCCTGGCCTGGGCAG
GCGCCACCATTGCCTATACG

Product: LacI family transcription regulator

Products: NA

Alternate protein names: Catabolite control protein [H]

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MGRRRQAVTIKHVAADAGVSLQTVSRVINNEPNVRPEMREKVQASIDRLGYVPSIAAQRMSGSRSYLILALNDRERTIAD
WRARQGTDWVDQMLLGGMLECAEHGYRLIFELVDTHNDHVERELTAAIAALQPDGAILTPPHSDNPKILAVLARHKVPFA
RIGAQTSEKGLPPGILVSMDDEGGARTATRHLLDLGHRRIGFISGPTEYRLAGKRVEGWRAEMEAAGLGVDGLLEAGDFT
YQSGVRAARALLTRPDRPSAIIASNDQMALATVEIADELGLSIPADLSLVSFDNTPLVRFTRPALTAVDQPIADTTARAV
RMLIASHRKPDADMGPVVMPMGFEIRGSTAPFGKGG

Sequences:

>Translated_356_residues
MGRRRQAVTIKHVAADAGVSLQTVSRVINNEPNVRPEMREKVQASIDRLGYVPSIAAQRMSGSRSYLILALNDRERTIAD
WRARQGTDWVDQMLLGGMLECAEHGYRLIFELVDTHNDHVERELTAAIAALQPDGAILTPPHSDNPKILAVLARHKVPFA
RIGAQTSEKGLPPGILVSMDDEGGARTATRHLLDLGHRRIGFISGPTEYRLAGKRVEGWRAEMEAAGLGVDGLLEAGDFT
YQSGVRAARALLTRPDRPSAIIASNDQMALATVEIADELGLSIPADLSLVSFDNTPLVRFTRPALTAVDQPIADTTARAV
RMLIASHRKPDADMGPVVMPMGFEIRGSTAPFGKGG
>Mature_355_residues
GRRRQAVTIKHVAADAGVSLQTVSRVINNEPNVRPEMREKVQASIDRLGYVPSIAAQRMSGSRSYLILALNDRERTIADW
RARQGTDWVDQMLLGGMLECAEHGYRLIFELVDTHNDHVERELTAAIAALQPDGAILTPPHSDNPKILAVLARHKVPFAR
IGAQTSEKGLPPGILVSMDDEGGARTATRHLLDLGHRRIGFISGPTEYRLAGKRVEGWRAEMEAAGLGVDGLLEAGDFTY
QSGVRAARALLTRPDRPSAIIASNDQMALATVEIADELGLSIPADLSLVSFDNTPLVRFTRPALTAVDQPIADTTARAVR
MLIASHRKPDADMGPVVMPMGFEIRGSTAPFGKGG

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (amyE) and the acetyl-coenzyme A synthetase (acsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790369, Length=360, Percent_Identity=28.3333333333333, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787948, Length=320, Percent_Identity=30.9375, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1790194, Length=341, Percent_Identity=29.3255131964809, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1786540, Length=311, Percent_Identity=30.2250803858521, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1787580, Length=318, Percent_Identity=26.1006289308176, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789202, Length=318, Percent_Identity=28.6163522012579, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789068, Length=318, Percent_Identity=25.4716981132075, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788474, Length=327, Percent_Identity=29.3577981651376, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1789456, Length=349, Percent_Identity=26.3610315186246, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI48994940, Length=343, Percent_Identity=23.6151603498542, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38571; Mature: 38439

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRRQAVTIKHVAADAGVSLQTVSRVINNEPNVRPEMREKVQASIDRLGYVPSIAAQRM
CCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
SGSRSYLILALNDRERTIADWRARQGTDWVDQMLLGGMLECAEHGYRLIFELVDTHNDHV
CCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ERELTAAIAALQPDGAILTPPHSDNPKILAVLARHKVPFARIGAQTSEKGLPPGILVSMD
HHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCEEEEEC
DEGGARTATRHLLDLGHRRIGFISGPTEYRLAGKRVEGWRAEMEAAGLGVDGLLEAGDFT
CCCCHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCH
YQSGVRAARALLTRPDRPSAIIASNDQMALATVEIADELGLSIPADLSLVSFDNTPLVRF
HHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEEHHHHCCCCCCCEEEEEECCCCEEEE
TRPALTAVDQPIADTTARAVRMLIASHRKPDADMGPVVMPMGFEIRGSTAPFGKGG
CCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEECCCCCCCCCC
>Mature Secondary Structure 
GRRRQAVTIKHVAADAGVSLQTVSRVINNEPNVRPEMREKVQASIDRLGYVPSIAAQRM
CCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
SGSRSYLILALNDRERTIADWRARQGTDWVDQMLLGGMLECAEHGYRLIFELVDTHNDHV
CCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ERELTAAIAALQPDGAILTPPHSDNPKILAVLARHKVPFARIGAQTSEKGLPPGILVSMD
HHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCEEEEEC
DEGGARTATRHLLDLGHRRIGFISGPTEYRLAGKRVEGWRAEMEAAGLGVDGLLEAGDFT
CCCCHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCH
YQSGVRAARALLTRPDRPSAIIASNDQMALATVEIADELGLSIPADLSLVSFDNTPLVRF
HHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEEEHHHHCCCCCCCEEEEEECCCCEEEE
TRPALTAVDQPIADTTARAVRMLIASHRKPDADMGPVVMPMGFEIRGSTAPFGKGG
CCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]