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The map label for this gene is glcA [H]

Identifier: 87199625

GI number: 87199625

Start: 1675798

End: 1676718

Strand: Direct

Name: glcA [H]

Synonym: Saro_1608

Alternate gene names: 87199625

Gene position: 1675798-1676718 (Clockwise)

Preceding gene: 87199624

Following gene: 87199626

Centisome position: 47.05

GC content: 64.82

Gene sequence:

>921_bases
ATGAGCCTGGGCGTGATCGCGGCCGGCGTACTGGCTGCGGCAACCCCCGCCGCCGATTGGCAGCTTGTCTGGTCGGACGA
GTTCGACGGGACCTCGCTCGACCGCTCGCGCTGGGTATTGGCGGACGATTGCTGGGGTGGCGGCAACGAAGAGCGCCAGT
GCTATACGGGGCGTGCCGAGAACCATTCCGTTCACGATGGCGTGCTCGAGATCGTCGCTCGCTGGGAAGAACGCACCGGC
CCAGCCTTTCCGCGCGATCAGCGCACCAACGCCGAAAAGGCGTCGGCTACCCGGACCAAACCGTTCACGTCGGCGCGGCT
CTCCACCGCCGGCAAGGCGGCCTGGCGCTATGGCAAGGTCCAGGTCCGCGCGCGCCTGCCGCAAGGGCAGGGTACATGGC
CCGCGATCTGGATGCTGCCGGAAGACTGGGCCTACGGAGGCTGGGCGCGTTCGGGCGAGATCGACATCATGGAGGCGGTG
AACCTTGGAACGCCTTGCGCAAAGTGCGCGGGCGGCGTCGAGAATCGGGTGCTGGGCACGATCCACTTCGGCGCAGAACC
TCCGCGCAATCGCTACATCAGCGAAGAGACCGAGCTTCCGGGCGCGATCGATGCTTTCCACGACTACGAGGTCGAGTGGA
ACGAGCAGGGCATCGTCTGGCGCGTTGATGGGAAGGAATTTGCACGGCGCGTGCCGCACGAATGGCACACGCTTGGTTCC
GACCGGGCAGGGGCGCCGTTCGACAAGCCATTCCATTTGATCCTGAATCTCGCAATCGGCGGCCATTTGCCCGAAGGCCG
AAACACCGGTGGAGTTTCCGAGACCGGTTTTCCGAAAAGGATGCAGGTCGATTGGGTCCGCGTCTGGCAAATGCCGCCCG
GACCAGATAACGCTGCTTCCGGGAACCTCAGGGGTAATTGA

Upstream 100 bases:

>100_bases
TCCAGACCCTGCGCGAGCAGGTCGATCGCACCGTTGCCGCGCTGCCCGCGCACGGTGATTATATCGCGCGCTACTGTGGC
GCCGAAATGCCGGCGGCTGC

Downstream 100 bases:

>100_bases
CGCAAGATGGGTCGCAGGCGCCAGGCGGTAACGATCAAGCACGTGGCAGCGGACGCCGGCGTCTCGCTGCAGACGGTCAG
CCGCGTTATCAACAACGAAC

Product: glucan endo-1,3-beta-D-glucosidase

Products: NA

Alternate protein names: (1->3)-beta-glucan endohydrolase; (1->3)-beta-glucanase A1 [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSLGVIAAGVLAAATPAADWQLVWSDEFDGTSLDRSRWVLADDCWGGGNEERQCYTGRAENHSVHDGVLEIVARWEERTG
PAFPRDQRTNAEKASATRTKPFTSARLSTAGKAAWRYGKVQVRARLPQGQGTWPAIWMLPEDWAYGGWARSGEIDIMEAV
NLGTPCAKCAGGVENRVLGTIHFGAEPPRNRYISEETELPGAIDAFHDYEVEWNEQGIVWRVDGKEFARRVPHEWHTLGS
DRAGAPFDKPFHLILNLAIGGHLPEGRNTGGVSETGFPKRMQVDWVRVWQMPPGPDNAASGNLRGN

Sequences:

>Translated_306_residues
MSLGVIAAGVLAAATPAADWQLVWSDEFDGTSLDRSRWVLADDCWGGGNEERQCYTGRAENHSVHDGVLEIVARWEERTG
PAFPRDQRTNAEKASATRTKPFTSARLSTAGKAAWRYGKVQVRARLPQGQGTWPAIWMLPEDWAYGGWARSGEIDIMEAV
NLGTPCAKCAGGVENRVLGTIHFGAEPPRNRYISEETELPGAIDAFHDYEVEWNEQGIVWRVDGKEFARRVPHEWHTLGS
DRAGAPFDKPFHLILNLAIGGHLPEGRNTGGVSETGFPKRMQVDWVRVWQMPPGPDNAASGNLRGN
>Mature_305_residues
SLGVIAAGVLAAATPAADWQLVWSDEFDGTSLDRSRWVLADDCWGGGNEERQCYTGRAENHSVHDGVLEIVARWEERTGP
AFPRDQRTNAEKASATRTKPFTSARLSTAGKAAWRYGKVQVRARLPQGQGTWPAIWMLPEDWAYGGWARSGEIDIMEAVN
LGTPCAKCAGGVENRVLGTIHFGAEPPRNRYISEETELPGAIDAFHDYEVEWNEQGIVWRVDGKEFARRVPHEWHTLGSD
RAGAPFDKPFHLILNLAIGGHLPEGRNTGGVSETGFPKRMQVDWVRVWQMPPGPDNAASGNLRGN

Specific function: Lysis of cellular walls containing beta-1,3-glucans. Implicated in the defense against fungal pathogens [H]

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 16 family [H]

Homologues:

Organism=Drosophila melanogaster, GI24661232, Length=284, Percent_Identity=25.7042253521127, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR008263 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: =3.2.1.39 [H]

Molecular weight: Translated: 33769; Mature: 33638

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGVIAAGVLAAATPAADWQLVWSDEFDGTSLDRSRWVLADDCWGGGNEERQCYTGRAE
CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCC
NHSVHDGVLEIVARWEERTGPAFPRDQRTNAEKASATRTKPFTSARLSTAGKAAWRYGKV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCHHHHEECEE
QVRARLPQGQGTWPAIWMLPEDWAYGGWARSGEIDIMEAVNLGTPCAKCAGGVENRVLGT
EEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEHHCCCCCHHHHCCCCCCCEEEE
IHFGAEPPRNRYISEETELPGAIDAFHDYEVEWNEQGIVWRVDGKEFARRVPHEWHTLGS
EEECCCCCCCCCCCCHHCCCCHHHHHCCCCEEECCCCEEEEECCHHHHHHCCHHHHHCCC
DRAGAPFDKPFHLILNLAIGGHLPEGRNTGGVSETGFPKRMQVDWVRVWQMPPGPDNAAS
CCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCC
GNLRGN
CCCCCC
>Mature Secondary Structure 
SLGVIAAGVLAAATPAADWQLVWSDEFDGTSLDRSRWVLADDCWGGGNEERQCYTGRAE
CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCC
NHSVHDGVLEIVARWEERTGPAFPRDQRTNAEKASATRTKPFTSARLSTAGKAAWRYGKV
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCHHHHEECEE
QVRARLPQGQGTWPAIWMLPEDWAYGGWARSGEIDIMEAVNLGTPCAKCAGGVENRVLGT
EEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEHHCCCCCHHHHCCCCCCCEEEE
IHFGAEPPRNRYISEETELPGAIDAFHDYEVEWNEQGIVWRVDGKEFARRVPHEWHTLGS
EEECCCCCCCCCCCCHHCCCCHHHHHCCCCEEECCCCEEEEECCHHHHHHCCHHHHHCCC
DRAGAPFDKPFHLILNLAIGGHLPEGRNTGGVSETGFPKRMQVDWVRVWQMPPGPDNAAS
CCCCCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCC
GNLRGN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2311931 [H]