| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is epr [H]
Identifier: 87199610
GI number: 87199610
Start: 1653118
End: 1654308
Strand: Direct
Name: epr [H]
Synonym: Saro_1593
Alternate gene names: 87199610
Gene position: 1653118-1654308 (Clockwise)
Preceding gene: 87199607
Following gene: 87199611
Centisome position: 46.42
GC content: 68.51
Gene sequence:
>1191_bases ATGGCGACGACCGCTGGCCCGGCCGCCGGCCAGCTTGCGCTGCCTGACCTCGCAACCCCGGTAGGTGAGACGCTGGGCAG GATCGAAAGGTCGCTGGAACCGGCCGAAGCGCTGACCGGAAAACTGAACAGTGCCGCACGGGACCTTGCACAGCAGCGGC TACGCCGGATCGACCGGTTGGTCCGGGCCAATCCGGCAAGCGTAGATCGCGACCGCGATGGACAGCCTGCGCGCAAGGGC GAACTGTTGATCGTAGATCCTGCGCCCGAGGCAATGTCGGCGGCCAGCAAGGCGGGTTTTGCCATGCTGGGCGAGGAGCG GTTGGAGGAACTGGGCGTGTCGGTGCTGCGCGTGGCCGTGCCCGATGCAATGTCGCTCGCCGCGGCGCAACGCACTTTGG CAAGGCTGCTGCCGGGCGCAAAGATCGCAGCGGATACGCTGCATTTTCAGAGCGGCACGCTGGATGCGGCAGGAAAGGAT ACGCCTGCGGCCCGCATGACGCCGATAGACGCGCCCGTGGGCATGATCGATGGCGGCCCCTCATCCGTGATCGGGGTGGA GCAGATGCGTGGATTTGCCGCAGGCGCCCCTTCGCCGAGCGATCATGGAACGGCGGTCGCATCCTTGCTGCATCATGCCG GGGTGCGGCACATTCTGGCGGCAGATGTCTATGGAAGCGATCCTGCGGGAGGGAACGCGCTGGCGATTGCCAGGGCGCTG GACTGGCTGATCGGACGCGGTGCGAGGGTGGTGTCGATCAGCCTTGTCGGCCCGCAGAACGCCTTGCTTGGCAAGGCGGT GGCGGCGGCGCAACGCAGGGGCGTGATGCTGGTCGCGGCGGTCGGAAACGACGGTCCTTCGGCGCCCCCGGCATTTCCGG CATCCTATCCCGGCGTTCTTGCCGTGACGGCAACCGACGGGCGGAACCGGGCACTGATCGAGGCAGGCAGGGCATCCCAC CTGGATTACGCAGCGCCCGGCGCGGACATGCTGGCGCTCAATGCCGCGGGAAAGGCGGTTCGTGTGCGCGGCACGTCCTT TGCGGTGCCGTTCGTGGCGGCAAGGGCTGCGGCGGCAGGACCGGCCGGGCGGGCGAGGCTGGACGCCGAGGCGGTCGACC TGGGTCCGCGCGGAGCCGATACGACTTATGGGCGCGGGCTGGTTTGCGGCGCGTGCAGGCGCGTGAAGTGA
Upstream 100 bases:
>100_bases GGGCCGCGCCATCCGTTTCATCCATGAGCGAAAACATTTATGGTTCAAAGTGATGAATTCGAGATACTTCCCCTGGCGCA CCGCGATGGCGCTTGTGATG
Downstream 100 bases:
>100_bases TCGGGTGAACCGACGGTGCCGTCCGCGAAATTTTTTGCCCGACGGATGAATTAAGCGCGCGGCGCGATCCGTTGTCCTTT CGGAAAGAGGCTTTCGAGCC
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MATTAGPAAGQLALPDLATPVGETLGRIERSLEPAEALTGKLNSAARDLAQQRLRRIDRLVRANPASVDRDRDGQPARKG ELLIVDPAPEAMSAASKAGFAMLGEERLEELGVSVLRVAVPDAMSLAAAQRTLARLLPGAKIAADTLHFQSGTLDAAGKD TPAARMTPIDAPVGMIDGGPSSVIGVEQMRGFAAGAPSPSDHGTAVASLLHHAGVRHILAADVYGSDPAGGNALAIARAL DWLIGRGARVVSISLVGPQNALLGKAVAAAQRRGVMLVAAVGNDGPSAPPAFPASYPGVLAVTATDGRNRALIEAGRASH LDYAAPGADMLALNAAGKAVRVRGTSFAVPFVAARAAAAGPAGRARLDAEAVDLGPRGADTTYGRGLVCGACRRVK
Sequences:
>Translated_396_residues MATTAGPAAGQLALPDLATPVGETLGRIERSLEPAEALTGKLNSAARDLAQQRLRRIDRLVRANPASVDRDRDGQPARKG ELLIVDPAPEAMSAASKAGFAMLGEERLEELGVSVLRVAVPDAMSLAAAQRTLARLLPGAKIAADTLHFQSGTLDAAGKD TPAARMTPIDAPVGMIDGGPSSVIGVEQMRGFAAGAPSPSDHGTAVASLLHHAGVRHILAADVYGSDPAGGNALAIARAL DWLIGRGARVVSISLVGPQNALLGKAVAAAQRRGVMLVAAVGNDGPSAPPAFPASYPGVLAVTATDGRNRALIEAGRASH LDYAAPGADMLALNAAGKAVRVRGTSFAVPFVAARAAAAGPAGRARLDAEAVDLGPRGADTTYGRGLVCGACRRVK >Mature_395_residues ATTAGPAAGQLALPDLATPVGETLGRIERSLEPAEALTGKLNSAARDLAQQRLRRIDRLVRANPASVDRDRDGQPARKGE LLIVDPAPEAMSAASKAGFAMLGEERLEELGVSVLRVAVPDAMSLAAAQRTLARLLPGAKIAADTLHFQSGTLDAAGKDT PAARMTPIDAPVGMIDGGPSSVIGVEQMRGFAAGAPSPSDHGTAVASLLHHAGVRHILAADVYGSDPAGGNALAIARALD WLIGRGARVVSISLVGPQNALLGKAVAAAQRRGVMLVAAVGNDGPSAPPAFPASYPGVLAVTATDGRNRALIEAGRASHL DYAAPGADMLALNAAGKAVRVRGTSFAVPFVAARAAAAGPAGRARLDAEAVDLGPRGADTTYGRGLVCGACRRVK
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 40084; Mature: 39953
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTAGPAAGQLALPDLATPVGETLGRIERSLEPAEALTGKLNSAARDLAQQRLRRIDRL CCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VRANPASVDRDRDGQPARKGELLIVDPAPEAMSAASKAGFAMLGEERLEELGVSVLRVAV HHCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCHHHEEHHC PDAMSLAAAQRTLARLLPGAKIAADTLHFQSGTLDAAGKDTPAARMTPIDAPVGMIDGGP CCHHHHHHHHHHHHHHCCCCCEEHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSVIGVEQMRGFAAGAPSPSDHGTAVASLLHHAGVRHILAADVYGSDPAGGNALAIARAL CCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHECCCCCCCCCCCHHHHHHHH DWLIGRGARVVSISLVGPQNALLGKAVAAAQRRGVMLVAAVGNDGPSAPPAFPASYPGVL HHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEE AVTATDGRNRALIEAGRASHLDYAAPGADMLALNAAGKAVRVRGTSFAVPFVAARAAAAG EEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCC PAGRARLDAEAVDLGPRGADTTYGRGLVCGACRRVK CCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure ATTAGPAAGQLALPDLATPVGETLGRIERSLEPAEALTGKLNSAARDLAQQRLRRIDRL CCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VRANPASVDRDRDGQPARKGELLIVDPAPEAMSAASKAGFAMLGEERLEELGVSVLRVAV HHCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCHHHHHHHHHHHHCHHHEEHHC PDAMSLAAAQRTLARLLPGAKIAADTLHFQSGTLDAAGKDTPAARMTPIDAPVGMIDGGP CCHHHHHHHHHHHHHHCCCCCEEHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SSVIGVEQMRGFAAGAPSPSDHGTAVASLLHHAGVRHILAADVYGSDPAGGNALAIARAL CCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHECCCCCCCCCCCHHHHHHHH DWLIGRGARVVSISLVGPQNALLGKAVAAAQRRGVMLVAAVGNDGPSAPPAFPASYPGVL HHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEE AVTATDGRNRALIEAGRASHLDYAAPGADMLALNAAGKAVRVRGTSFAVPFVAARAAAAG EEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCC PAGRARLDAEAVDLGPRGADTTYGRGLVCGACRRVK CCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2116590; 3142851; 7934828; 9384377 [H]