| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199611
Identifier: 87199611
GI number: 87199611
Start: 1654437
End: 1655300
Strand: Direct
Name: 87199611
Synonym: Saro_1594
Alternate gene names: NA
Gene position: 1654437-1655300 (Clockwise)
Preceding gene: 87199610
Following gene: 87199616
Centisome position: 46.45
GC content: 70.25
Gene sequence:
>864_bases ATGCGTGGATTTCTGATGGCTTCGGGCGCTCTCCTGCTGATTGCGGCACCGGCACAGGCACAGATCCTTGGCGGTGGTGG CCTGGGAGGCGGCCTTGGCGGTTCGCTCGGCGGGACGCTGGGTGGAACCCTGGGCGGCGGTACGATCGGATCGCCAATCG ACACCGTGGACAGCACCACGCGCGGCGCGGTGCGCGGATCGGGCAATGCTTCGGCGAACAAGTCGGTCGACCGCAAGACT GGCCGGGTAAAGGCTGATGGCGCGGCGCAGGGTTCGCTTGCCGGCGATGTGGCCAGCACGACGCGGGCGCCGACGCGGAT GATCGGGGCAGACGCAGGTGGCAGCGGTTCGGCTAAGGCATCGGGCGCGGCTTCGGGCGGCATCGATGCGCAGCTCGTAG GGACCGATGGCGTGCGTTCGGCGGTGGGCGGTGCGACGTCGACCGTGCGCGACGTGGCGGGACGCGGGCGTGACATGGCG GGCGGTGTTGCCTCTTCGGCCACCGGGCTGGCAGGCCGCGCCGCAGGTTCGGCGGCAGCGTCGGGAAGCGGCGCGCTCTC CGCACAGTCCGGCACGCTCGCGCTGGCAGGTAGCGCGGCGTCCAATCTTGATGGCACCTTTGCCGTGTCCAGGGGCATGC CGGTCTTAGGCGCCGATGGCGAACGTTTGGGGAAGGTCCGCGACGTGATCACCGATGCGCGGGGCAATGTATCGGCGCTG CTGGTCAAGGCGGGGAGTGCCAAGGCCCTGCTGCCGGCGGCAAGCTTTGCCGGACGCGGCGACGCGCTGGTTACCGCGAT GGGCGAAGGCGAGATCCGCCAGGTGGCGCAGCGGCAGGAAGCCGACGCCAAGGGCAAGAACTGA
Upstream 100 bases:
>100_bases AATTTTTTGCCCGACGGATGAATTAAGCGCGCGGCGCGATCCGTTGTCCTTTCGGAAAGAGGCTTTCGAGCCTCGATGAC AAGGACGAAAGGATCAAGCG
Downstream 100 bases:
>100_bases TGGTGGGCGGGAGACGATGAAGGGGCGTTCGTCTCCCGCCCTGCTCAAGCGCGTTCCGGGGCGGGACTGACGGTCCCGGT ACGCTCGAGCTTTCCCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MRGFLMASGALLLIAAPAQAQILGGGGLGGGLGGSLGGTLGGTLGGGTIGSPIDTVDSTTRGAVRGSGNASANKSVDRKT GRVKADGAAQGSLAGDVASTTRAPTRMIGADAGGSGSAKASGAASGGIDAQLVGTDGVRSAVGGATSTVRDVAGRGRDMA GGVASSATGLAGRAAGSAAASGSGALSAQSGTLALAGSAASNLDGTFAVSRGMPVLGADGERLGKVRDVITDARGNVSAL LVKAGSAKALLPAASFAGRGDALVTAMGEGEIRQVAQRQEADAKGKN
Sequences:
>Translated_287_residues MRGFLMASGALLLIAAPAQAQILGGGGLGGGLGGSLGGTLGGTLGGGTIGSPIDTVDSTTRGAVRGSGNASANKSVDRKT GRVKADGAAQGSLAGDVASTTRAPTRMIGADAGGSGSAKASGAASGGIDAQLVGTDGVRSAVGGATSTVRDVAGRGRDMA GGVASSATGLAGRAAGSAAASGSGALSAQSGTLALAGSAASNLDGTFAVSRGMPVLGADGERLGKVRDVITDARGNVSAL LVKAGSAKALLPAASFAGRGDALVTAMGEGEIRQVAQRQEADAKGKN >Mature_287_residues MRGFLMASGALLLIAAPAQAQILGGGGLGGGLGGSLGGTLGGTLGGGTIGSPIDTVDSTTRGAVRGSGNASANKSVDRKT GRVKADGAAQGSLAGDVASTTRAPTRMIGADAGGSGSAKASGAASGGIDAQLVGTDGVRSAVGGATSTVRDVAGRGRDMA GGVASSATGLAGRAAGSAAASGSGALSAQSGTLALAGSAASNLDGTFAVSRGMPVLGADGERLGKVRDVITDARGNVSAL LVKAGSAKALLPAASFAGRGDALVTAMGEGEIRQVAQRQEADAKGKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26902; Mature: 26902
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGFLMASGALLLIAAPAQAQILGGGGLGGGLGGSLGGTLGGTLGGGTIGSPIDTVDSTT CCCEEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC RGAVRGSGNASANKSVDRKTGRVKADGAAQGSLAGDVASTTRAPTRMIGADAGGSGSAKA CCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCHHHHHCCCCHHEEECCCCCCCCCCC SGAASGGIDAQLVGTDGVRSAVGGATSTVRDVAGRGRDMAGGVASSATGLAGRAAGSAAA CCCCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SGSGALSAQSGTLALAGSAASNLDGTFAVSRGMPVLGADGERLGKVRDVITDARGNVSAL CCCCCEEECCCCEEEECCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHHCCCCCEEEE LVKAGSAKALLPAASFAGRGDALVTAMGEGEIRQVAQRQEADAKGKN EEECCCCCEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRGFLMASGALLLIAAPAQAQILGGGGLGGGLGGSLGGTLGGTLGGGTIGSPIDTVDSTT CCCEEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCC RGAVRGSGNASANKSVDRKTGRVKADGAAQGSLAGDVASTTRAPTRMIGADAGGSGSAKA CCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCHHHHHCCCCHHEEECCCCCCCCCCC SGAASGGIDAQLVGTDGVRSAVGGATSTVRDVAGRGRDMAGGVASSATGLAGRAAGSAAA CCCCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC SGSGALSAQSGTLALAGSAASNLDGTFAVSRGMPVLGADGERLGKVRDVITDARGNVSAL CCCCCEEECCCCEEEECCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHHHCCCCCEEEE LVKAGSAKALLPAASFAGRGDALVTAMGEGEIRQVAQRQEADAKGKN EEECCCCCEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA