| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199587
Identifier: 87199587
GI number: 87199587
Start: 1628053
End: 1628577
Strand: Direct
Name: 87199587
Synonym: Saro_1570
Alternate gene names: NA
Gene position: 1628053-1628577 (Clockwise)
Preceding gene: 87199586
Following gene: 87199588
Centisome position: 45.71
GC content: 65.9
Gene sequence:
>525_bases ATGACCAGCGTGATGCTCGGAACCATCGAGGAACTGGTCGCACGCGAGCGCATTCGCGACTGCCTCTACCGCTATTGCCG CGGGATCGACCGGGCCGATGAGGCCATGCTTCGTTCGGCGTACTGGCCCGATGGCACCGATGCCCACGGCCCCTACAACG GCAGTGCCGAAGGCTTCATCGAATGGGCGATGAAGACCTTGCCGCACATTGAACGCGGCATCCACCAGATCCACAACGTG TTGATCGAGTTTCGCGAAGGCGGCGCGGCGGTGGAAAGCTATTTCTCTGCCTTCCAGCGCCAGCCCGGTGCCGACGGCCG GCTGACCCAGTGGGACATGAAGGGCCGCTATCTCGACTGGTTCGTCGAGCGCGCGGGCGAATGGCGCGTGCTCAACCGTC TCGTCGTGTTCGACTGGGTCGAGGAAATGCCCCTTCCGCCCGGCACCGAGGACGAGCGCTTCGGGGCGCGCAAGCCCGTC GGCGGACGCTGGCCGGACGATCCGGTCTACGCCGTCCGGGCCTGA
Upstream 100 bases:
>100_bases GCTTCAGCGACGAATTGATTGTCAGCCATCATCTGAAACGGCAGATGATGCTTGCGATCGCGCACGGCTCGGTCGACCAC TACAGAACGAGGTTTGCCGC
Downstream 100 bases:
>100_bases CCCCAGCCTGATCCGGTCATGACGGAAGCCTTCCCCGCGTTGGTCCGCCAGGACGATGCACGTTATGCGATCACGGTCGG GCCGGACCTTGCGGTAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTSVMLGTIEELVARERIRDCLYRYCRGIDRADEAMLRSAYWPDGTDAHGPYNGSAEGFIEWAMKTLPHIERGIHQIHNV LIEFREGGAAVESYFSAFQRQPGADGRLTQWDMKGRYLDWFVERAGEWRVLNRLVVFDWVEEMPLPPGTEDERFGARKPV GGRWPDDPVYAVRA
Sequences:
>Translated_174_residues MTSVMLGTIEELVARERIRDCLYRYCRGIDRADEAMLRSAYWPDGTDAHGPYNGSAEGFIEWAMKTLPHIERGIHQIHNV LIEFREGGAAVESYFSAFQRQPGADGRLTQWDMKGRYLDWFVERAGEWRVLNRLVVFDWVEEMPLPPGTEDERFGARKPV GGRWPDDPVYAVRA >Mature_173_residues TSVMLGTIEELVARERIRDCLYRYCRGIDRADEAMLRSAYWPDGTDAHGPYNGSAEGFIEWAMKTLPHIERGIHQIHNVL IEFREGGAAVESYFSAFQRQPGADGRLTQWDMKGRYLDWFVERAGEWRVLNRLVVFDWVEEMPLPPGTEDERFGARKPVG GRWPDDPVYAVRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20079; Mature: 19948
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVMLGTIEELVARERIRDCLYRYCRGIDRADEAMLRSAYWPDGTDAHGPYNGSAEGFI CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH EWAMKTLPHIERGIHQIHNVLIEFREGGAAVESYFSAFQRQPGADGRLTQWDMKGRYLDW HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHH FVERAGEWRVLNRLVVFDWVEEMPLPPGTEDERFGARKPVGGRWPDDPVYAVRA HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure TSVMLGTIEELVARERIRDCLYRYCRGIDRADEAMLRSAYWPDGTDAHGPYNGSAEGFI CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH EWAMKTLPHIERGIHQIHNVLIEFREGGAAVESYFSAFQRQPGADGRLTQWDMKGRYLDW HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHH FVERAGEWRVLNRLVVFDWVEEMPLPPGTEDERFGARKPVGGRWPDDPVYAVRA HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]