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The map label for this gene is 87199479

Identifier: 87199479

GI number: 87199479

Start: 1502365

End: 1502853

Strand: Direct

Name: 87199479

Synonym: Saro_1459

Alternate gene names: NA

Gene position: 1502365-1502853 (Clockwise)

Preceding gene: 87199478

Following gene: 87199480

Centisome position: 42.18

GC content: 60.33

Gene sequence:

>489_bases
ATGCGTGGCTTCCGGCACTGGCGTTGGCACCTGGATGAGATGTACGTGAAACTGAACGGCGAGATGGTCTATCTCTGGCG
TGCGGTCGACCACGAGGGTGAGGTGCTGGAGAGTTTTGTCACCAGAAAACGGGACAAAGCCGCGGCTTTGACCTTCATGA
AGAAGGCGTTGAAGCGGCATGGAAAGGCCGAGGCCATCGTCACCGACGGGCTGCGTTCTTACCCTGCGGCGATGCGGGAA
CTGGGCAATGAGGGGCGACGCGAAGTTGGCCGGCACCTCAACAATCGCGCGGAAAATTCACACCTGCCGTTCCGACGAAG
AGAGCGGGCGATGCTGCGGTTTCGGCAGATGAAGTCGCTGCAGAAATTCGCCTCGGTCCATGCCTCCATCCACAACCACT
TTTCCCAGGAACGCCACCTCGTCGACCGACTAACCTTCAAGGTTCGCCGCTCGGCCGCGCTGGTCGAGTGGCAGTCGCTT
GTGGCCTGA

Upstream 100 bases:

>100_bases
ACCGACCTGAACCGCCAGCATAGGGAATTTTGGGAGCCCACATCTGCGGAAACTTCGGTGCCCATTGACAGCTGATATCC
GCAGGCAGCGGGTCAACAGG

Downstream 100 bases:

>100_bases
GGTTTCAATGCTGTAGCGGCAGCTCCGCCAAGCGGAGACGAGTTCGCATTGGACTGACAGCACCCTGGCGTGCGGTCGAC
CACGAGGGTGAGGTGCTGGA

Product: IS6 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MRGFRHWRWHLDEMYVKLNGEMVYLWRAVDHEGEVLESFVTRKRDKAAALTFMKKALKRHGKAEAIVTDGLRSYPAAMRE
LGNEGRREVGRHLNNRAENSHLPFRRRERAMLRFRQMKSLQKFASVHASIHNHFSQERHLVDRLTFKVRRSAALVEWQSL
VA

Sequences:

>Translated_162_residues
MRGFRHWRWHLDEMYVKLNGEMVYLWRAVDHEGEVLESFVTRKRDKAAALTFMKKALKRHGKAEAIVTDGLRSYPAAMRE
LGNEGRREVGRHLNNRAENSHLPFRRRERAMLRFRQMKSLQKFASVHASIHNHFSQERHLVDRLTFKVRRSAALVEWQSL
VA
>Mature_162_residues
MRGFRHWRWHLDEMYVKLNGEMVYLWRAVDHEGEVLESFVTRKRDKAAALTFMKKALKRHGKAEAIVTDGLRSYPAAMRE
LGNEGRREVGRHLNNRAENSHLPFRRRERAMLRFRQMKSLQKFASVHASIHNHFSQERHLVDRLTFKVRRSAALVEWQSL
VA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 19248; Mature: 19248

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGFRHWRWHLDEMYVKLNGEMVYLWRAVDHEGEVLESFVTRKRDKAAALTFMKKALKRH
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKAEAIVTDGLRSYPAAMRELGNEGRREVGRHLNNRAENSHLPFRRRERAMLRFRQMKSL
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QKFASVHASIHNHFSQERHLVDRLTFKVRRSAALVEWQSLVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGFRHWRWHLDEMYVKLNGEMVYLWRAVDHEGEVLESFVTRKRDKAAALTFMKKALKRH
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKAEAIVTDGLRSYPAAMRELGNEGRREVGRHLNNRAENSHLPFRRRERAMLRFRQMKSL
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QKFASVHASIHNHFSQERHLVDRLTFKVRRSAALVEWQSLVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]