| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is fprA [H]
Identifier: 87199454
GI number: 87199454
Start: 1476300
End: 1477604
Strand: Reverse
Name: fprA [H]
Synonym: Saro_1433
Alternate gene names: 87199454
Gene position: 1477604-1476300 (Counterclockwise)
Preceding gene: 87199455
Following gene: 87199453
Centisome position: 41.49
GC content: 64.6
Gene sequence:
>1305_bases ATGCGGCATATCGCGATCATCGGCTCGGGACCGGCCGGATACTACACCGCGGAAGCCGCGCAGAAGCAGTGGGGGGACGA CGTAAGGGTCGATATCTTCGACATGCTCCCTGTACCCTATGGCCTGATCCGGACCGGCGTTGCGCCGGATCACCAATCGA TCAAGGGCGTGTCGCGCCGCTACGAACAGACCGCGCTGTCGGAAAATGTCCGGTTCGTAGGCAACGTGAAGATCGGCGAG CATGTTTCCGTGGAGGAGCTCCAGGAGCTTTATGACGCGGTCGTTCTCGCAACCGGTGCCCCGCGCGATCGGCAACTGGG CGTGCCCGGCGATCATCTGGGCAATGTCTTCGGCAGTGCGGCTTTCGTTGGCTGGTACAATGGCCATCCGGAATTCACCG CCCTTGAACCCGATCTGTCAGGACATACGGCTGTCGTCATCGGCATGGGAAACGTCGCGCTCGACGTCACCCGCATTCTC TCCAAGACCCGCGAGGAATTTTCCGGAAGCGACATCGTCGGCCACGCGCTGGAATCGCTGATGGCCTCGAAGATCAAGCG CATCGTGATCCTCGGGCGGCGAGGCCCGCACCAGATCATGATGACGCCCAAGGAATTGGGCGAAATGGGTCACCTTTCGC GTACCGCCCCCTGGGTCGACCCGCGCGACCTGCCGGACGAAGGCGAAGACGCACTGCTGGAGCCGGGCATCCGCAAGTCC GTCAGCCATCTGCGCTCGTTCGCGGCCATTCCGGAAAGCCACCGCGCCGACCTTCCACTTGAAGTCGAGTTCGACTTCTT CGCCGCGCCAAAGGCCTTATTGGGCGAAGGTCGGGTCGAGGCTGTGGAAGTGGAGCGGACGAAAATCGAGGCGGGACGCG CCGTCGGCACCGGCGAATTCTATGAAATTCCCGCGAGCCTCGTGGTGTCGTGCATCGGATACCAGACCTCCCCGATCCCG GGCGTGCCCTTCGACGAGCGCGCGGGGCGCTTCGCCAACGACGGCGGGCGTATCCTGCCGGGGCTTTACTGCGTTGGTTG GGCACGGCGCGGCCCGTCGGGGACCATCGGCACCAACCGCCCGGATGGCTTCGCGGTAATCGAAATGATCGCCTCGGACA TCGGCGGCGGCGCCGGCAAGAAGGGGCGCCCCGGCTTCGACAACCTTGCCGAAGGCCGCGGGCTCGACGTGGTGACTTTC CGCGATTGGAAGAAGATCGAGGAAGCCGAAGCTGCGCGCGCGCGCGCTGGCGCCCCGCGTGAAAAGTTCGTCGACATCGC GGAGATGATCCGGGCCCGGGGCTGA
Upstream 100 bases:
>100_bases TCCTCGACGACGACGCACACGCGTGTTGATATCGGGCATCGCCGCTTTCCTTTTGGCGATCATGCGATAGCATCCGGCGA AAGACTCGTCGGGAGAGACT
Downstream 100 bases:
>100_bases TATCGGCGGCGATTGACCGCACGCCAAAGGTCTGACTTAATCGAGCGGTTAACGCGATGGCCTGACGACGCGAGTCGGGC TGCGCGGGGAGAAGGAGCAC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: NFR [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MRHIAIIGSGPAGYYTAEAAQKQWGDDVRVDIFDMLPVPYGLIRTGVAPDHQSIKGVSRRYEQTALSENVRFVGNVKIGE HVSVEELQELYDAVVLATGAPRDRQLGVPGDHLGNVFGSAAFVGWYNGHPEFTALEPDLSGHTAVVIGMGNVALDVTRIL SKTREEFSGSDIVGHALESLMASKIKRIVILGRRGPHQIMMTPKELGEMGHLSRTAPWVDPRDLPDEGEDALLEPGIRKS VSHLRSFAAIPESHRADLPLEVEFDFFAAPKALLGEGRVEAVEVERTKIEAGRAVGTGEFYEIPASLVVSCIGYQTSPIP GVPFDERAGRFANDGGRILPGLYCVGWARRGPSGTIGTNRPDGFAVIEMIASDIGGGAGKKGRPGFDNLAEGRGLDVVTF RDWKKIEEAEAARARAGAPREKFVDIAEMIRARG
Sequences:
>Translated_434_residues MRHIAIIGSGPAGYYTAEAAQKQWGDDVRVDIFDMLPVPYGLIRTGVAPDHQSIKGVSRRYEQTALSENVRFVGNVKIGE HVSVEELQELYDAVVLATGAPRDRQLGVPGDHLGNVFGSAAFVGWYNGHPEFTALEPDLSGHTAVVIGMGNVALDVTRIL SKTREEFSGSDIVGHALESLMASKIKRIVILGRRGPHQIMMTPKELGEMGHLSRTAPWVDPRDLPDEGEDALLEPGIRKS VSHLRSFAAIPESHRADLPLEVEFDFFAAPKALLGEGRVEAVEVERTKIEAGRAVGTGEFYEIPASLVVSCIGYQTSPIP GVPFDERAGRFANDGGRILPGLYCVGWARRGPSGTIGTNRPDGFAVIEMIASDIGGGAGKKGRPGFDNLAEGRGLDVVTF RDWKKIEEAEAARARAGAPREKFVDIAEMIRARG >Mature_434_residues MRHIAIIGSGPAGYYTAEAAQKQWGDDVRVDIFDMLPVPYGLIRTGVAPDHQSIKGVSRRYEQTALSENVRFVGNVKIGE HVSVEELQELYDAVVLATGAPRDRQLGVPGDHLGNVFGSAAFVGWYNGHPEFTALEPDLSGHTAVVIGMGNVALDVTRIL SKTREEFSGSDIVGHALESLMASKIKRIVILGRRGPHQIMMTPKELGEMGHLSRTAPWVDPRDLPDEGEDALLEPGIRKS VSHLRSFAAIPESHRADLPLEVEFDFFAAPKALLGEGRVEAVEVERTKIEAGRAVGTGEFYEIPASLVVSCIGYQTSPIP GVPFDERAGRFANDGGRILPGLYCVGWARRGPSGTIGTNRPDGFAVIEMIASDIGGGAGKKGRPGFDNLAEGRGLDVVTF RDWKKIEEAEAARARAGAPREKFVDIAEMIRARG
Specific function: May serve as electron transfer protein and supply electrons to P450 systems [H]
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferredoxin--NADP reductase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI111118981, Length=453, Percent_Identity=42.1633554083885, Blast_Score=314, Evalue=9e-86, Organism=Homo sapiens, GI111118983, Length=459, Percent_Identity=41.6122004357298, Blast_Score=309, Evalue=4e-84, Organism=Caenorhabditis elegans, GI17543860, Length=441, Percent_Identity=31.5192743764172, Blast_Score=205, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6320584, Length=482, Percent_Identity=29.4605809128631, Blast_Score=187, Evalue=3e-48, Organism=Drosophila melanogaster, GI17137178, Length=453, Percent_Identity=39.514348785872, Blast_Score=278, Evalue=6e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR021163 - InterPro: IPR016040 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 46881; Mature: 46881
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHIAIIGSGPAGYYTAEAAQKQWGDDVRVDIFDMLPVPYGLIRTGVAPDHQSIKGVSRR CCEEEEEECCCCCCEEHHHHHHHCCCCCEEEHHHHCCCCHHHHHCCCCCCHHHHHHHHHH YEQTALSENVRFVGNVKIGEHVSVEELQELYDAVVLATGAPRDRQLGVPGDHLGNVFGSA HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHCC AFVGWYNGHPEFTALEPDLSGHTAVVIGMGNVALDVTRILSKTREEFSGSDIVGHALESL EEEEEECCCCCCEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH MASKIKRIVILGRRGPHQIMMTPKELGEMGHLSRTAPWVDPRDLPDEGEDALLEPGIRKS HHHHHCEEEEECCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHH VSHLRSFAAIPESHRADLPLEVEFDFFAAPKALLGEGRVEAVEVERTKIEAGRAVGTGEF HHHHHHHHCCCCCCCCCCCEEEEECHHHCCHHHHCCCCEEEEEEHHHHHHCCCCCCCCHH YEIPASLVVSCIGYQTSPIPGVPFDERAGRFANDGGRILPGLYCVGWARRGPSGTIGTNR HCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHEEHHHCCCCCCCCCCCC PDGFAVIEMIASDIGGGAGKKGRPGFDNLAEGRGLDVVTFRDWKKIEEAEAARARAGAPR CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCH EKFVDIAEMIRARG HHHHHHHHHHHHCC >Mature Secondary Structure MRHIAIIGSGPAGYYTAEAAQKQWGDDVRVDIFDMLPVPYGLIRTGVAPDHQSIKGVSRR CCEEEEEECCCCCCEEHHHHHHHCCCCCEEEHHHHCCCCHHHHHCCCCCCHHHHHHHHHH YEQTALSENVRFVGNVKIGEHVSVEELQELYDAVVLATGAPRDRQLGVPGDHLGNVFGSA HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHCC AFVGWYNGHPEFTALEPDLSGHTAVVIGMGNVALDVTRILSKTREEFSGSDIVGHALESL EEEEEECCCCCCEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH MASKIKRIVILGRRGPHQIMMTPKELGEMGHLSRTAPWVDPRDLPDEGEDALLEPGIRKS HHHHHCEEEEECCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHH VSHLRSFAAIPESHRADLPLEVEFDFFAAPKALLGEGRVEAVEVERTKIEAGRAVGTGEF HHHHHHHHCCCCCCCCCCCEEEEECHHHCCHHHHCCCCEEEEEEHHHHHHCCCCCCCCHH YEIPASLVVSCIGYQTSPIPGVPFDERAGRFANDGGRILPGLYCVGWARRGPSGTIGTNR HCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHEEHHHCCCCCCCCCCCC PDGFAVIEMIASDIGGGAGKKGRPGFDNLAEGRGLDVVTFRDWKKIEEAEAARARAGAPR CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCH EKFVDIAEMIRARG HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036; 12071965; 12614197; 12102623 [H]