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The map label for this gene is allB [C]

Identifier: 87199453

GI number: 87199453

Start: 1474448

End: 1476196

Strand: Reverse

Name: allB [C]

Synonym: Saro_1432

Alternate gene names: 87199453

Gene position: 1476196-1474448 (Counterclockwise)

Preceding gene: 87199454

Following gene: 87199452

Centisome position: 41.45

GC content: 63.87

Gene sequence:

>1749_bases
ATGCCAGCCTATGACCTCATCATCCGCAATGGCACCATTTGCGACGGGACCGGCGCGCCGCGCTTCACCGGCGACGTCGC
GGTGAAGAACGGCCTGATTGTCGCGGTCGGCGCCGTTCGCGGCGACGCAGCCGAGGAAGTCGACGCGACGGGGCGCATCG
TCGCCCCGGGCTGGGTCGACGTGCACACGCACTACGATGGCCAGGCCACCTGGGATCCCGAAATGGCACCGTCATCATGG
CACGGGGTCACCACTGTCATCATGGGCAACTGCGGGGTCGGCTTCGCACCGGCCGCACCCGACCGGCACGACTGGCTCAT
CGGCCTGATGGAAGGCGTAGAGGACATTCCCGGCACGGCGCTTGCCGAAGGGATGGCCTGGGACTGGGAGAGCTTCCCGG
AATACCTCGATTCCCTCGAAAAGATGCCGCGCGCCGTCGATGTCGGCACGCACGTGCCCCACGGCGCCGTGCGTGCCTAC
GTACTTGGCGAAAGAGAGAAGCCGGGCGCCGTGCCGACTGCGGAAGACATCCGGAAGATGTCGGAAATCGTCGAGGAAGG
TGTCCGTGCCGGTGCGCTTGGATTTTCGACCAGCCGCACGGTCATCCACAAGTCGGTCGATGGCGAAGTCGTTCCCGGAA
CAACCGCGACGGCCGAGGAACTGATCGAGATCGGCCGTGCCATGGGCCGCGTTGGCCACGGCGTGTTCGAAATGGCGTCG
GACATGAAGCGCGAATGGGACGAATTCGGCTGGATGGGTGCGCTCAGCCGCGAAACCGGCCTGCCTGTCACCTATGCAGC
GCTACAGTCCATCGCCAAGGAAATGCCGCTCGAGGAACAGATTGCCGAAATGCGCCACCAGAACGCGCAAGGCGCCAATA
TCGTGGCGCAGATCGCGCTGCGCGGGAACGGCGTGATCATGGCCTGGCGGGGCACCATTCACCCCTTCCGCTTCCGGCCG
AGCTATGCCGCAATCGCCGAGCTTCCCTGGGAAGAGCAACTCGTGCAACTCAAGGACCCGGCGTTCAGGGCAAAGGTCCT
GGCAGAGGCGAACGTTTATCCCGACAGCGACATCGTGAACCTGTTCCGCATGATCGCCGAAGGCTGGCACAACCAGTTCA
TCATGGACGAGGACTTCGACTACGAACCTCAGCCCGAGGCCAGCATCCTGCTTCGCGCGAAGACTGCGGGCGTATCACCC
GACGCCTTCGCCTACGACAAGCTGATGGAAGATGAGGGCAATGGCTTCATTTACCTGCCCATCCTGAACTACGCGGACGG
AAACCTCGATTTCCTCGAGGCGCTTCAGGCCGCGGACGATACGGTAAACTCGCTGTCGGACGGCGGAGCGCATTGCGGTA
CGATCTGCGATGCGGCGAGCCCGACCTTCATGCTCCAGCACTGGGTTCGCGACCGTCGCAGGGGCAGCCGGATCAGCCTG
GAACACGCCATCAAGCGTCAATGCCACGATACGGCGCGGCTCTATGGCCTGGACGACAGGGGCGTGATCGCGCCGGGATA
CCTGGCTGATATCAACGTGATCGACTTCGACCGCGTGCGCCTGCTCAAGCCCTGGCTCGCGTTCGACCTTCCCGCTGGCG
GCAAGCGGCTGCTGCAGAAAGCGGAAGGCTATGACTACACCATCAAGGGCGGAAAGGTGACCTTCCGCAACGGCGAATGG
ACGGGTGCCACGCCGGGCAACCTCATTCGCGGACCACAGCGCGCCGATCTCATGGAGGCTGCCGAATAA

Upstream 100 bases:

>100_bases
CGGCGGCGATTGACCGCACGCCAAAGGTCTGACTTAATCGAGCGGTTAACGCGATGGCCTGACGACGCGAGTCGGGCTGC
GCGGGGAGAAGGAGCACCCG

Downstream 100 bases:

>100_bases
TGACCGTCAATGCAATTCGCGTAGGCTCCCCCGCCTCGCTCGACACCTTGTATCTCGATACGCTGCCTGATTGCGGACAA
CCCGGACCTGGCGAAATCCG

Product: hypothetical protein

Products: Allantoate; H+ [C]

Alternate protein names: NA

Number of amino acids: Translated: 582; Mature: 581

Protein sequence:

>582_residues
MPAYDLIIRNGTICDGTGAPRFTGDVAVKNGLIVAVGAVRGDAAEEVDATGRIVAPGWVDVHTHYDGQATWDPEMAPSSW
HGVTTVIMGNCGVGFAPAAPDRHDWLIGLMEGVEDIPGTALAEGMAWDWESFPEYLDSLEKMPRAVDVGTHVPHGAVRAY
VLGEREKPGAVPTAEDIRKMSEIVEEGVRAGALGFSTSRTVIHKSVDGEVVPGTTATAEELIEIGRAMGRVGHGVFEMAS
DMKREWDEFGWMGALSRETGLPVTYAALQSIAKEMPLEEQIAEMRHQNAQGANIVAQIALRGNGVIMAWRGTIHPFRFRP
SYAAIAELPWEEQLVQLKDPAFRAKVLAEANVYPDSDIVNLFRMIAEGWHNQFIMDEDFDYEPQPEASILLRAKTAGVSP
DAFAYDKLMEDEGNGFIYLPILNYADGNLDFLEALQAADDTVNSLSDGGAHCGTICDAASPTFMLQHWVRDRRRGSRISL
EHAIKRQCHDTARLYGLDDRGVIAPGYLADINVIDFDRVRLLKPWLAFDLPAGGKRLLQKAEGYDYTIKGGKVTFRNGEW
TGATPGNLIRGPQRADLMEAAE

Sequences:

>Translated_582_residues
MPAYDLIIRNGTICDGTGAPRFTGDVAVKNGLIVAVGAVRGDAAEEVDATGRIVAPGWVDVHTHYDGQATWDPEMAPSSW
HGVTTVIMGNCGVGFAPAAPDRHDWLIGLMEGVEDIPGTALAEGMAWDWESFPEYLDSLEKMPRAVDVGTHVPHGAVRAY
VLGEREKPGAVPTAEDIRKMSEIVEEGVRAGALGFSTSRTVIHKSVDGEVVPGTTATAEELIEIGRAMGRVGHGVFEMAS
DMKREWDEFGWMGALSRETGLPVTYAALQSIAKEMPLEEQIAEMRHQNAQGANIVAQIALRGNGVIMAWRGTIHPFRFRP
SYAAIAELPWEEQLVQLKDPAFRAKVLAEANVYPDSDIVNLFRMIAEGWHNQFIMDEDFDYEPQPEASILLRAKTAGVSP
DAFAYDKLMEDEGNGFIYLPILNYADGNLDFLEALQAADDTVNSLSDGGAHCGTICDAASPTFMLQHWVRDRRRGSRISL
EHAIKRQCHDTARLYGLDDRGVIAPGYLADINVIDFDRVRLLKPWLAFDLPAGGKRLLQKAEGYDYTIKGGKVTFRNGEW
TGATPGNLIRGPQRADLMEAAE
>Mature_581_residues
PAYDLIIRNGTICDGTGAPRFTGDVAVKNGLIVAVGAVRGDAAEEVDATGRIVAPGWVDVHTHYDGQATWDPEMAPSSWH
GVTTVIMGNCGVGFAPAAPDRHDWLIGLMEGVEDIPGTALAEGMAWDWESFPEYLDSLEKMPRAVDVGTHVPHGAVRAYV
LGEREKPGAVPTAEDIRKMSEIVEEGVRAGALGFSTSRTVIHKSVDGEVVPGTTATAEELIEIGRAMGRVGHGVFEMASD
MKREWDEFGWMGALSRETGLPVTYAALQSIAKEMPLEEQIAEMRHQNAQGANIVAQIALRGNGVIMAWRGTIHPFRFRPS
YAAIAELPWEEQLVQLKDPAFRAKVLAEANVYPDSDIVNLFRMIAEGWHNQFIMDEDFDYEPQPEASILLRAKTAGVSPD
AFAYDKLMEDEGNGFIYLPILNYADGNLDFLEALQAADDTVNSLSDGGAHCGTICDAASPTFMLQHWVRDRRRGSRISLE
HAIKRQCHDTARLYGLDDRGVIAPGYLADINVIDFDRVRLLKPWLAFDLPAGGKRLLQKAEGYDYTIKGGKVTFRNGEWT
GATPGNLIRGPQRADLMEAAE

Specific function: Involved In The Anaerobic Utilization Of Allantoin. [C]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: 3.5.2.5 [C]

Molecular weight: Translated: 63660; Mature: 63528

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAYDLIIRNGTICDGTGAPRFTGDVAVKNGLIVAVGAVRGDAAEEVDATGRIVAPGWVD
CCCCEEEEECCEEECCCCCCCCCCCEEECCCEEEEEECCCCCCHHHHCCCCCEECCCEEE
VHTHYDGQATWDPEMAPSSWHGVTTVIMGNCGVGFAPAAPDRHDWLIGLMEGVEDIPGTA
EEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
LAEGMAWDWESFPEYLDSLEKMPRAVDVGTHVPHGAVRAYVLGEREKPGAVPTAEDIRKM
HHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHEEEEEECCCCCCCCCCCHHHHHHH
SEIVEEGVRAGALGFSTSRTVIHKSVDGEVVPGTTATAEELIEIGRAMGRVGHGVFEMAS
HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
DMKREWDEFGWMGALSRETGLPVTYAALQSIAKEMPLEEQIAEMRHQNAQGANIVAQIAL
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEE
RGNGVIMAWRGTIHPFRFRPSYAAIAELPWEEQLVQLKDPAFRAKVLAEANVYPDSDIVN
CCCCEEEEECCCCCCEEECCCHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH
LFRMIAEGWHNQFIMDEDFDYEPQPEASILLRAKTAGVSPDAFAYDKLMEDEGNGFIYLP
HHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEE
ILNYADGNLDFLEALQAADDTVNSLSDGGAHCGTICDAASPTFMLQHWVRDRRRGSRISL
EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCH
EHAIKRQCHDTARLYGLDDRGVIAPGYLADINVIDFDRVRLLKPWLAFDLPAGGKRLLQK
HHHHHHHHHHHHHEECCCCCCEECCCCEEECEEECHHHHHHHHHHHHEECCCCHHHHHHH
AEGYDYTIKGGKVTFRNGEWTGATPGNLIRGPQRADLMEAAE
HCCCCEEEECCEEEEECCCCCCCCCCHHCCCCCHHHHHHHCC
>Mature Secondary Structure 
PAYDLIIRNGTICDGTGAPRFTGDVAVKNGLIVAVGAVRGDAAEEVDATGRIVAPGWVD
CCCEEEEECCEEECCCCCCCCCCCEEECCCEEEEEECCCCCCHHHHCCCCCEECCCEEE
VHTHYDGQATWDPEMAPSSWHGVTTVIMGNCGVGFAPAAPDRHDWLIGLMEGVEDIPGTA
EEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
LAEGMAWDWESFPEYLDSLEKMPRAVDVGTHVPHGAVRAYVLGEREKPGAVPTAEDIRKM
HHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHEEEEEECCCCCCCCCCCHHHHHHH
SEIVEEGVRAGALGFSTSRTVIHKSVDGEVVPGTTATAEELIEIGRAMGRVGHGVFEMAS
HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
DMKREWDEFGWMGALSRETGLPVTYAALQSIAKEMPLEEQIAEMRHQNAQGANIVAQIAL
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEE
RGNGVIMAWRGTIHPFRFRPSYAAIAELPWEEQLVQLKDPAFRAKVLAEANVYPDSDIVN
CCCCEEEEECCCCCCEEECCCHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH
LFRMIAEGWHNQFIMDEDFDYEPQPEASILLRAKTAGVSPDAFAYDKLMEDEGNGFIYLP
HHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEE
ILNYADGNLDFLEALQAADDTVNSLSDGGAHCGTICDAASPTFMLQHWVRDRRRGSRISL
EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCH
EHAIKRQCHDTARLYGLDDRGVIAPGYLADINVIDFDRVRLLKPWLAFDLPAGGKRLLQK
HHHHHHHHHHHHHEECCCCCCEECCCCEEECEEECHHHHHHHHHHHHEECCCCHHHHHHH
AEGYDYTIKGGKVTFRNGEWTGATPGNLIRGPQRADLMEAAE
HCCCCEEEECCEEEEECCCCCCCCCCHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Allantoin; H2O [C]

Specific reaction: Allantoin + H2O --> Allantoate + H+ [C]

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: Dithiothreitol; p-Chloromercuribenzene-sulphonic acid [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]