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The map label for this gene is xcpW [H]

Identifier: 87199406

GI number: 87199406

Start: 1430170

End: 1430766

Strand: Direct

Name: xcpW [H]

Synonym: Saro_1385

Alternate gene names: 87199406

Gene position: 1430170-1430766 (Clockwise)

Preceding gene: 87199405

Following gene: 87199407

Centisome position: 40.16

GC content: 69.51

Gene sequence:

>597_bases
ATGAGCGAAACGCCCGTCCGCAACGGCTTTACGCTTGTCGAGATGCTGATCGCGCTGGCGCTTTTCGCGGTCATCGCGGT
TGGCGCGCTCGGACTGCTGCGCTTTTCGGTCGATGCGGAGCTGGCAAGCCGCGCCCGGACCGAAACCATCGCGGCGCAGC
GCCGGTTCCTCTCGGTGTGGACGGCGGACCTGGCGCAGGCCGTTCCACGCCCATCGCGCGACCAGTCCGGCGCCCCCCAT
CCCGCATTCGAGGCAGGGACGGACGGCGTGGTCATCCGCCTGACCCGCAGCGGCTGGGACAATCTTGACGGCGCCCCGCG
TCCCGGCCTGCAGAAAGTCGAGTACCGCCTGACTGCCAAGGCACTCGTGCGCTCCGGCTACCCCTTTCCCGATGGCGCAT
CGCCCGAACCTCCGGCCGAAGTCCTGCCGATCACCGGGCCCCCGACGGTGCGGTTCCGCACGAAGGACGGCAATTGGCGC
GACCGGTGGGAACCCCAGCTCCAGACCGAGCTTCCGGTGGCGGTCGAACTGCTCCTGCCCCAGGCCGGGGTGCCGCCGCT
GCGCATCGTGTCTCTGGTCGGGGTGAACTACCAGTGA

Upstream 100 bases:

>100_bases
CTGACTTCGGCGTTCTGGGGATCACCCTTTCCGTCCGCGAGACGACGCCGGGTGCGCAGAGCCAGGCCTTTTCGCTCGAT
TTCACCCGGCTCCCCGCGGC

Downstream 100 bases:

>100_bases
GCGCAGGGGACCCGAAGGAGCGCGGTGCGGCACTGCTGTCCGTGTTGCTGCTGGTTGCGGTCATGGCGGTGATCGCGGCG
GTTATGCTCGACCGGCTCAA

Product: general secretion pathway protein J

Products: NA

Alternate protein names: PilD-dependent protein pddD [H]

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSETPVRNGFTLVEMLIALALFAVIAVGALGLLRFSVDAELASRARTETIAAQRRFLSVWTADLAQAVPRPSRDQSGAPH
PAFEAGTDGVVIRLTRSGWDNLDGAPRPGLQKVEYRLTAKALVRSGYPFPDGASPEPPAEVLPITGPPTVRFRTKDGNWR
DRWEPQLQTELPVAVELLLPQAGVPPLRIVSLVGVNYQ

Sequences:

>Translated_198_residues
MSETPVRNGFTLVEMLIALALFAVIAVGALGLLRFSVDAELASRARTETIAAQRRFLSVWTADLAQAVPRPSRDQSGAPH
PAFEAGTDGVVIRLTRSGWDNLDGAPRPGLQKVEYRLTAKALVRSGYPFPDGASPEPPAEVLPITGPPTVRFRTKDGNWR
DRWEPQLQTELPVAVELLLPQAGVPPLRIVSLVGVNYQ
>Mature_197_residues
SETPVRNGFTLVEMLIALALFAVIAVGALGLLRFSVDAELASRARTETIAAQRRFLSVWTADLAQAVPRPSRDQSGAPHP
AFEAGTDGVVIRLTRSGWDNLDGAPRPGLQKVEYRLTAKALVRSGYPFPDGASPEPPAEVLPITGPPTVRFRTKDGNWRD
RWEPQLQTELPVAVELLLPQAGVPPLRIVSLVGVNYQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP J family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010055
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 21498; Mature: 21367

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETPVRNGFTLVEMLIALALFAVIAVGALGLLRFSVDAELASRARTETIAAQRRFLSVW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TADLAQAVPRPSRDQSGAPHPAFEAGTDGVVIRLTRSGWDNLDGAPRPGLQKVEYRLTAK
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
ALVRSGYPFPDGASPEPPAEVLPITGPPTVRFRTKDGNWRDRWEPQLQTELPVAVELLLP
HHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCHHEEEECC
QAGVPPLRIVSLVGVNYQ
CCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
SETPVRNGFTLVEMLIALALFAVIAVGALGLLRFSVDAELASRARTETIAAQRRFLSVW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TADLAQAVPRPSRDQSGAPHPAFEAGTDGVVIRLTRSGWDNLDGAPRPGLQKVEYRLTAK
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
ALVRSGYPFPDGASPEPPAEVLPITGPPTVRFRTKDGNWRDRWEPQLQTELPVAVELLLP
HHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCHHEEEECC
QAGVPPLRIVSLVGVNYQ
CCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1588814; 1309616; 10984043 [H]