Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199404

Identifier: 87199404

GI number: 87199404

Start: 1429345

End: 1429749

Strand: Direct

Name: 87199404

Synonym: Saro_1383

Alternate gene names: NA

Gene position: 1429345-1429749 (Clockwise)

Preceding gene: 87199402

Following gene: 87199405

Centisome position: 40.13

GC content: 68.15

Gene sequence:

>405_bases
ATGCTGGTGGTCCTTCTTGTCATGGGGCTGCTCGCGACAGTCGCGGTGCTGACCATGCCCGGAGACGAACGCAAGCTGCG
CAACGAGGCGGAACGCTTTGCCGCGCGCACGCTGGCTGCGCGGGACGAGGCGATCGTCGGCGCGCGTCCGGTTGCGCTCG
TGGTCAGCGAGCGCGGTTACTATTTCGAGCGGCGAATGGAGGGCCAGTGGCAACCACTGCCCGGTCGCGGTTTCGACCTG
ACAGGCTGGGACGAGGGCACCCGCGCCGATGCGGTTCGTCAGCGGCTGGTGTTCGATTCGCTGGGCCTGGCCAGCAGCGA
GGCAGCGGTGCGGCTGGACCGGGGCGGGCAAGTGCTCGTCGTACATGTCCGCCGTGATGGCAAGGTGACTGTCGATGCCG
GCTGA

Upstream 100 bases:

>100_bases
ATTGGTCGTAAAACCGTCACGTTTCTGCCGCATGCGAGTGACCGTGCCCACCTGCGAGACCCCAACCCGACCGGCTGCAA
ACGGCTTCTCGCTGGTCGAG

Downstream 100 bases:

>100_bases
CAACAGGCCCCCGATCCGCGCTCCGATCCGCGCCCCGATCCGGGCCCCGATCCGCGCCCACGCCAACGGCTTCACCCTGC
TCGAGCTTCTGGTCGCGCTC

Product: general secretion pathway protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLVVLLVMGLLATVAVLTMPGDERKLRNEAERFAARTLAARDEAIVGARPVALVVSERGYYFERRMEGQWQPLPGRGFDL
TGWDEGTRADAVRQRLVFDSLGLASSEAAVRLDRGGQVLVVHVRRDGKVTVDAG

Sequences:

>Translated_134_residues
MLVVLLVMGLLATVAVLTMPGDERKLRNEAERFAARTLAARDEAIVGARPVALVVSERGYYFERRMEGQWQPLPGRGFDL
TGWDEGTRADAVRQRLVFDSLGLASSEAAVRLDRGGQVLVVHVRRDGKVTVDAG
>Mature_134_residues
MLVVLLVMGLLATVAVLTMPGDERKLRNEAERFAARTLAARDEAIVGARPVALVVSERGYYFERRMEGQWQPLPGRGFDL
TGWDEGTRADAVRQRLVFDSLGLASSEAAVRLDRGGQVLVVHVRRDGKVTVDAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14691; Mature: 14691

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVLLVMGLLATVAVLTMPGDERKLRNEAERFAARTLAARDEAIVGARPVALVVSERGY
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCC
YFERRMEGQWQPLPGRGFDLTGWDEGTRADAVRQRLVFDSLGLASSEAAVRLDRGGQVLV
EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE
VHVRRDGKVTVDAG
EEEECCCEEEEECC
>Mature Secondary Structure
MLVVLLVMGLLATVAVLTMPGDERKLRNEAERFAARTLAARDEAIVGARPVALVVSERGY
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCC
YFERRMEGQWQPLPGRGFDLTGWDEGTRADAVRQRLVFDSLGLASSEAAVRLDRGGQVLV
EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE
VHVRRDGKVTVDAG
EEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA