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The map label for this gene is ygeK [C]

Identifier: 87199253

GI number: 87199253

Start: 1283080

End: 1283751

Strand: Direct

Name: ygeK [C]

Synonym: Saro_1231

Alternate gene names: 87199253

Gene position: 1283080-1283751 (Clockwise)

Preceding gene: 87199249

Following gene: 87199255

Centisome position: 36.03

GC content: 62.05

Gene sequence:

>672_bases
ATGCGCCCCGCCCCGCTTCCTGCCAACACGGACCAAAGGGCACGCATTGGAATACCGGGAAAACGCACGTATATACGTCC
CATGTCCATAGCCGAGATGATCGCTTCCAGTCCGACGGCCGCCGTCATCAGCAATCCGCGTTTGCCGGACAACCCGATCA
TTGCCTGCAATGACGCGTTCGTCGAACTGACCGGCTATGCGCGCGAGGAGATCATTGGCCGCAACTGCCGCTTCCTTCGC
GGGAGCGGGACGGAAGACGACAAGGCACGCATCCTGCGCGACGGGATCTGGCGCAAGCAGCCGGTCATGGTCGAGATCGT
CAACTACAAGAAGGATGGCACGCGTTTTCGCAACGCGGTCATGGTCGCGCCGATCTTCGATGCCGACGGCGAGGTCGAAT
ACTTTCTCGGCTCTCAGGTCGAAATTGCCGAGGACCAGGGCCAGGCCAACGACGCGCGCCGCAATGGCGCTGCCGAGCGG
GTCGAACGTCTCAGCCGCCGCCAGAAGGAAATTCTCGTGCTGATGGCAGCGGGCAAGCTCAACAAGCAGATCGCCTACGA
ACTGGGACTGAGCGAGCGCACGGTGAAGATGCATCGTTCCGCCGTGCTCAAGGGGCTCGACGTCAAGACCAGCGCCGACG
CGATCCGCGTAGCCATCGAAGCTGGGTTCTAG

Upstream 100 bases:

>100_bases
CCGATCACGTCGGCCATGCCGGACGACGCGGCGAGGGATGGGGAGAGCACGTTCATTGCGGCAAGGCTCCGGTGTGGCAA
TGTTGCGGGATGCCCTGCGG

Downstream 100 bases:

>100_bases
GTCCTTTTTGCGGCCTCAGGCCGAAACCGTCAGGGCCTTGGCGCCTTCGATCCTGAACTCGCACCATACCCCATCGGGAT
CGAAATTCAGTTCCACCCCG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: EL360-LOV-histidine kinase; EL360-LOV-HK [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRPAPLPANTDQRARIGIPGKRTYIRPMSIAEMIASSPTAAVISNPRLPDNPIIACNDAFVELTGYAREEIIGRNCRFLR
GSGTEDDKARILRDGIWRKQPVMVEIVNYKKDGTRFRNAVMVAPIFDADGEVEYFLGSQVEIAEDQGQANDARRNGAAER
VERLSRRQKEILVLMAAGKLNKQIAYELGLSERTVKMHRSAVLKGLDVKTSADAIRVAIEAGF

Sequences:

>Translated_223_residues
MRPAPLPANTDQRARIGIPGKRTYIRPMSIAEMIASSPTAAVISNPRLPDNPIIACNDAFVELTGYAREEIIGRNCRFLR
GSGTEDDKARILRDGIWRKQPVMVEIVNYKKDGTRFRNAVMVAPIFDADGEVEYFLGSQVEIAEDQGQANDARRNGAAER
VERLSRRQKEILVLMAAGKLNKQIAYELGLSERTVKMHRSAVLKGLDVKTSADAIRVAIEAGF
>Mature_223_residues
MRPAPLPANTDQRARIGIPGKRTYIRPMSIAEMIASSPTAAVISNPRLPDNPIIACNDAFVELTGYAREEIIGRNCRFLR
GSGTEDDKARILRDGIWRKQPVMVEIVNYKKDGTRFRNAVMVAPIFDADGEVEYFLGSQVEIAEDQGQANDARRNGAAER
VERLSRRQKEILVLMAAGKLNKQIAYELGLSERTVKMHRSAVLKGLDVKTSADAIRVAIEAGF

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Homo sapiens, GI6912446, Length=136, Percent_Identity=32.3529411764706, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI26051271, Length=120, Percent_Identity=35, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI17136946, Length=136, Percent_Identity=28.6764705882353, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 24725; Mature: 24725

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPAPLPANTDQRARIGIPGKRTYIRPMSIAEMIASSPTAAVISNPRLPDNPIIACNDAF
CCCCCCCCCCCCCEEECCCCCCEEECHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCE
VELTGYAREEIIGRNCRFLRGSGTEDDKARILRDGIWRKQPVMVEIVNYKKDGTRFRNAV
EEECCHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHCEE
MVAPIFDADGEVEYFLGSQVEIAEDQGQANDARRNGAAERVERLSRRQKEILVLMAAGKL
EEEEEECCCCCEEEEECCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHEEEEEEECCCC
NKQIAYELGLSERTVKMHRSAVLKGLDVKTSADAIRVAIEAGF
CHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MRPAPLPANTDQRARIGIPGKRTYIRPMSIAEMIASSPTAAVISNPRLPDNPIIACNDAF
CCCCCCCCCCCCCEEECCCCCCEEECHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCE
VELTGYAREEIIGRNCRFLRGSGTEDDKARILRDGIWRKQPVMVEIVNYKKDGTRFRNAV
EEECCHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHCEE
MVAPIFDADGEVEYFLGSQVEIAEDQGQANDARRNGAAERVERLSRRQKEILVLMAAGKL
EEEEEECCCCCEEEEECCEEEEECCCCCCCHHHHCCHHHHHHHHHHHHHEEEEEEECCCC
NKQIAYELGLSERTVKMHRSAVLKGLDVKTSADAIRVAIEAGF
CHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA