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The map label for this gene is yngJ [H]

Identifier: 87199246

GI number: 87199246

Start: 1276877

End: 1278061

Strand: Reverse

Name: yngJ [H]

Synonym: Saro_1224

Alternate gene names: 87199246

Gene position: 1278061-1276877 (Counterclockwise)

Preceding gene: 87199247

Following gene: 87199245

Centisome position: 35.88

GC content: 63.88

Gene sequence:

>1185_bases
ATGAGCACGGTAAACCCTGGCATGGACGCCGAAATCTTCGACCAGTTCATCGAGCAGTTGCGCCGCTACGTACGCGAGCG
GCTGATCCCCGCCGAGGACGAGGTGATTGCCCAGGATCGCATCCCGGACGACATCCTTGCCGAAATGCGCGAAATGGGCC
TGTTCGGGATAACCATTCCCGAAGAGTTCGGCGGCGCGGGCATGAACATCAGCCAGTACATCGAAACGGTAAAGCAGCTT
AGCTACGCGTCGCCAGCTTTCCGCTCCACCATCTCGATCAACATCGGCATGACTGGCAGCGCGATCAAGAACTTCGGCAC
GCCCGAACAGAAGGCCGAATGGCTGCCACGGATCGCCAGCGGCGAAATCGCCTGCTTCGGCCTGACCGAGCCGGGTTCGG
GATCGGACAGCGCGGCAATGCAGACCATGGCAGTGCGCGATGGCAACGGCTACCGCCTTAACGGCACCAAGCGCTATATC
ACCAACAGCCCGAGCGCGAAGATCGGGCTGATCATGGCGCGCACCTCGAAAGAGGCGCTGCCGCGCAACGCCCACGTCTC
GGCCTTCATCGTCGACATGACCGCACCTGGCATCAGCATCGGCAAGCCCGACAAGAAGATGGGCCAGTCTGGCGCGCAGA
TCGCCGACGTGATCATGGAAGACGTCCACGTCCCCGGATCGGCACTGGTCGGCGGAGAGGAAGGACGCGGCTTCCAGATC
GCAATGCAGAGCCTCGACAACGGGCGCCTTTCAGTTGCGGGCATGGGCGTGGGCATGGGGCGCCGCGCGCTCGACACCGC
GATCCGCTACGCCACCGAACGCAAGGCCTTCGGCGAAGCCATCGCCAACTTCCAGCTCATCCAGGCGATGCTCGCCGATA
GCGAGGCGGAACTCTACGCCGCCGAATGCATGATCGCCGACGCCTGCGCCCGCGCCGACCGTGGCGAAAGCGTCCAGCGC
AAGGCAGCAGCGGCCAAGCTGTTCTCCTCCGAAGCCTGCGGCCGCGTGGTCGATCGCTGCGTGCAGGTCTATGGCGGGGC
AGGCTACCTCGCCGAATATCCGGCCGAGCGCTTCTTCCGCGACGCCCGCATCCTGCGCATCTACGAAGGCACCAGCCAGA
TCATGCAGTTGCAGATCGCCAAGCACCTGCTGCGCGAATTCGCAAGCGAAGGAAGCGTCTGGTGA

Upstream 100 bases:

>100_bases
TCGCCGAGGAACTGATCCCGGCGTTCAAGCCCGCATTCGCGCGGGCGGACGAAGTCTCCGCCCACGTCTTCCCTTACGAT
CCGGTCTGAGGAGGCCTGAG

Downstream 100 bases:

>100_bases
TCCCACCCGCCTTGGGGAAGCGCTGAAATGTACCAACTTCTCAACGGCCTTTCGATCGTCGAGGTCTCGTCGTTCGTCGC
TTCGCCCACGGCGGGTCTCT

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MSTVNPGMDAEIFDQFIEQLRRYVRERLIPAEDEVIAQDRIPDDILAEMREMGLFGITIPEEFGGAGMNISQYIETVKQL
SYASPAFRSTISINIGMTGSAIKNFGTPEQKAEWLPRIASGEIACFGLTEPGSGSDSAAMQTMAVRDGNGYRLNGTKRYI
TNSPSAKIGLIMARTSKEALPRNAHVSAFIVDMTAPGISIGKPDKKMGQSGAQIADVIMEDVHVPGSALVGGEEGRGFQI
AMQSLDNGRLSVAGMGVGMGRRALDTAIRYATERKAFGEAIANFQLIQAMLADSEAELYAAECMIADACARADRGESVQR
KAAAAKLFSSEACGRVVDRCVQVYGGAGYLAEYPAERFFRDARILRIYEGTSQIMQLQIAKHLLREFASEGSVW

Sequences:

>Translated_394_residues
MSTVNPGMDAEIFDQFIEQLRRYVRERLIPAEDEVIAQDRIPDDILAEMREMGLFGITIPEEFGGAGMNISQYIETVKQL
SYASPAFRSTISINIGMTGSAIKNFGTPEQKAEWLPRIASGEIACFGLTEPGSGSDSAAMQTMAVRDGNGYRLNGTKRYI
TNSPSAKIGLIMARTSKEALPRNAHVSAFIVDMTAPGISIGKPDKKMGQSGAQIADVIMEDVHVPGSALVGGEEGRGFQI
AMQSLDNGRLSVAGMGVGMGRRALDTAIRYATERKAFGEAIANFQLIQAMLADSEAELYAAECMIADACARADRGESVQR
KAAAAKLFSSEACGRVVDRCVQVYGGAGYLAEYPAERFFRDARILRIYEGTSQIMQLQIAKHLLREFASEGSVW
>Mature_393_residues
STVNPGMDAEIFDQFIEQLRRYVRERLIPAEDEVIAQDRIPDDILAEMREMGLFGITIPEEFGGAGMNISQYIETVKQLS
YASPAFRSTISINIGMTGSAIKNFGTPEQKAEWLPRIASGEIACFGLTEPGSGSDSAAMQTMAVRDGNGYRLNGTKRYIT
NSPSAKIGLIMARTSKEALPRNAHVSAFIVDMTAPGISIGKPDKKMGQSGAQIADVIMEDVHVPGSALVGGEEGRGFQIA
MQSLDNGRLSVAGMGVGMGRRALDTAIRYATERKAFGEAIANFQLIQAMLADSEAELYAAECMIADACARADRGESVQRK
AAAAKLFSSEACGRVVDRCVQVYGGAGYLAEYPAERFFRDARILRIYEGTSQIMQLQIAKHLLREFASEGSVW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=380, Percent_Identity=38.1578947368421, Blast_Score=269, Evalue=3e-72,
Organism=Homo sapiens, GI76496475, Length=377, Percent_Identity=37.1352785145889, Blast_Score=228, Evalue=9e-60,
Organism=Homo sapiens, GI4557235, Length=377, Percent_Identity=37.1352785145889, Blast_Score=227, Evalue=1e-59,
Organism=Homo sapiens, GI4501859, Length=368, Percent_Identity=30.9782608695652, Blast_Score=221, Evalue=7e-58,
Organism=Homo sapiens, GI226958412, Length=376, Percent_Identity=31.1170212765957, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI21361497, Length=379, Percent_Identity=35.6200527704486, Blast_Score=215, Evalue=4e-56,
Organism=Homo sapiens, GI4557231, Length=377, Percent_Identity=33.6870026525199, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI187960098, Length=377, Percent_Identity=33.6870026525199, Blast_Score=212, Evalue=4e-55,
Organism=Homo sapiens, GI226958414, Length=373, Percent_Identity=31.6353887399464, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=31.5649867374005, Blast_Score=198, Evalue=6e-51,
Organism=Homo sapiens, GI7656849, Length=389, Percent_Identity=31.1053984575836, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI4503943, Length=372, Percent_Identity=31.1827956989247, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI7669494, Length=360, Percent_Identity=31.1111111111111, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI38505218, Length=417, Percent_Identity=26.6187050359712, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI211971008, Length=396, Percent_Identity=27.7777777777778, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI48976061, Length=396, Percent_Identity=27.7777777777778, Blast_Score=137, Evalue=2e-32,
Organism=Escherichia coli, GI87081958, Length=352, Percent_Identity=30.9659090909091, Blast_Score=158, Evalue=7e-40,
Organism=Escherichia coli, GI1786223, Length=348, Percent_Identity=29.5977011494253, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI87081702, Length=334, Percent_Identity=27.5449101796407, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI87082384, Length=278, Percent_Identity=26.978417266187, Blast_Score=72, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17506239, Length=386, Percent_Identity=32.6424870466321, Blast_Score=232, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI17534899, Length=373, Percent_Identity=35.1206434316354, Blast_Score=223, Evalue=9e-59,
Organism=Caenorhabditis elegans, GI17569725, Length=378, Percent_Identity=34.9206349206349, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17570075, Length=398, Percent_Identity=34.4221105527638, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17508101, Length=368, Percent_Identity=31.25, Blast_Score=217, Evalue=8e-57,
Organism=Caenorhabditis elegans, GI17538396, Length=377, Percent_Identity=31.5649867374005, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI71985184, Length=382, Percent_Identity=32.9842931937173, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17533517, Length=380, Percent_Identity=29.7368421052632, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17505929, Length=379, Percent_Identity=31.1345646437995, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17534353, Length=368, Percent_Identity=28.2608695652174, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71990804, Length=282, Percent_Identity=31.2056737588652, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17551932, Length=366, Percent_Identity=29.5081967213115, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI32563615, Length=234, Percent_Identity=32.4786324786325, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71982178, Length=270, Percent_Identity=30.7407407407407, Blast_Score=151, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI71985192, Length=313, Percent_Identity=31.9488817891374, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17562446, Length=361, Percent_Identity=28.808864265928, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17531909, Length=248, Percent_Identity=31.4516129032258, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17531913, Length=184, Percent_Identity=28.804347826087, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI86563381, Length=351, Percent_Identity=24.2165242165242, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI86563383, Length=351, Percent_Identity=24.2165242165242, Blast_Score=73, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6321233, Length=368, Percent_Identity=23.6413043478261, Blast_Score=71, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21356377, Length=349, Percent_Identity=38.6819484240688, Blast_Score=252, Evalue=4e-67,
Organism=Drosophila melanogaster, GI24646207, Length=371, Percent_Identity=36.6576819407008, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24666513, Length=372, Percent_Identity=34.4086021505376, Blast_Score=234, Evalue=5e-62,
Organism=Drosophila melanogaster, GI281363737, Length=377, Percent_Identity=34.7480106100796, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24660351, Length=371, Percent_Identity=32.8840970350404, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI21355753, Length=368, Percent_Identity=30.7065217391304, Blast_Score=197, Evalue=9e-51,
Organism=Drosophila melanogaster, GI19920834, Length=373, Percent_Identity=28.4182305630027, Blast_Score=132, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24652780, Length=349, Percent_Identity=20.6303724928367, Blast_Score=75, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42683; Mature: 42552

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVNPGMDAEIFDQFIEQLRRYVRERLIPAEDEVIAQDRIPDDILAEMREMGLFGITIP
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCEEEEECC
EEFGGAGMNISQYIETVKQLSYASPAFRSTISINIGMTGSAIKNFGTPEQKAEWLPRIAS
HHHCCCCCCHHHHHHHHHHHHCCCCCHHCEEEEEECCCHHHHHHCCCCHHHHHHCCHHCC
GEIACFGLTEPGSGSDSAAMQTMAVRDGNGYRLNGTKRYITNSPSAKIGLIMARTSKEAL
CCEEEEECCCCCCCCCHHHHHEEEEECCCCEEECCCEEEECCCCCCEEEEEEEECCHHHC
PRNAHVSAFIVDMTAPGISIGKPDKKMGQSGAQIADVIMEDVHVPGSALVGGEEGRGFQI
CCCCCEEEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHH
AMQSLDNGRLSVAGMGVGMGRRALDTAIRYATERKAFGEAIANFQLIQAMLADSEAELYA
HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AECMIADACARADRGESVQRKAAAAKLFSSEACGRVVDRCVQVYGGAGYLAEYPAERFFR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHH
DARILRIYEGTSQIMQLQIAKHLLREFASEGSVW
HHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STVNPGMDAEIFDQFIEQLRRYVRERLIPAEDEVIAQDRIPDDILAEMREMGLFGITIP
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCEEEEECC
EEFGGAGMNISQYIETVKQLSYASPAFRSTISINIGMTGSAIKNFGTPEQKAEWLPRIAS
HHHCCCCCCHHHHHHHHHHHHCCCCCHHCEEEEEECCCHHHHHHCCCCHHHHHHCCHHCC
GEIACFGLTEPGSGSDSAAMQTMAVRDGNGYRLNGTKRYITNSPSAKIGLIMARTSKEAL
CCEEEEECCCCCCCCCHHHHHEEEEECCCCEEECCCEEEECCCCCCEEEEEEEECCHHHC
PRNAHVSAFIVDMTAPGISIGKPDKKMGQSGAQIADVIMEDVHVPGSALVGGEEGRGFQI
CCCCCEEEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHH
AMQSLDNGRLSVAGMGVGMGRRALDTAIRYATERKAFGEAIANFQLIQAMLADSEAELYA
HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AECMIADACARADRGESVQRKAAAAKLFSSEACGRVVDRCVQVYGGAGYLAEYPAERFFR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHH
DARILRIYEGTSQIMQLQIAKHLLREFASEGSVW
HHHEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]