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The map label for this gene is frc [H]

Identifier: 87199245

GI number: 87199245

Start: 1275620

End: 1276849

Strand: Reverse

Name: frc [H]

Synonym: Saro_1223

Alternate gene names: 87199245

Gene position: 1276849-1275620 (Counterclockwise)

Preceding gene: 87199246

Following gene: 87199244

Centisome position: 35.85

GC content: 66.02

Gene sequence:

>1230_bases
ATGTACCAACTTCTCAACGGCCTTTCGATCGTCGAGGTCTCGTCGTTCGTCGCTTCGCCCACGGCGGGTCTCTACTGCGC
CCAGATGGGCGCGGAAGTGATCCGCATCGACGACAGCCGGGGCGGGCTCGACTACAAGCGTTACATGATGACGCGAGAGG
GTCGCTCGCTCTCGTGGGAAAACCTCAACCGCGCCAAGAAGAGCGTCGCGCTGGACCTTCAGTCTGCCGAGGGGCGCGAG
CTTGCCGTGCAGCTTGCGCAGAAAACCGGGCAGGTGATCACCAACCTGCCGCTCGAAAGCTTCATGGCGCACGAAAGGAT
CGCGGCCGGACGGCCCGATCTCGTCTCGGTCCGGATCATGGGCTGGCACGACGGACGGCAGGCGATGGACTTCACGGTCA
ACGCCGCCTCGGGCTATCCGCTGATGACCGGGCCAGAGGAATGGGACCCGAAGGACGCCCCTCCGGTCAACCAGATCCTT
CCCGCCTGGGACTTCATAACCGGCGCCTATTGCGCCTTCGCACTTCTGGCCGGGCTGCGCCACCGCGATGCAACCGGCCA
GGGCAGCGAGCTTCGCGTGCCCTTGGGGGACGTGGCAATCGGCACGGCGTTCAATGCTGGCGCCGCACCCGAAATGCTCT
ATCGCGACGGGGACCGCGAGCGGATCGGCAATGCCATCTGGGGCGCGTTTGGCCGCGACTTCCGCAGCCGCGACGGCCAC
CGCTTCATGGTCGCCGCGCTCACCCCCAAGCAGTGGAAGGCGACGGTCGAGGCCTTCGATCTTGCCGAAGCCGTCGCCGC
ACTCGAGGCGGAACTCGGCGTCAGCTTCCTTGCCAGCGATCACTGGCGCTTCGTCCACCGCCACCGCCTGTTCGACCTGT
TCCAGCAGGCGGCCGAAGGGTTCGACTATGCCGACCTCTCCCAGCGCATGACCCGCGCCGGCGCAACCTTCGAACGCTAT
CGCACCATGCACGAAATGGCCCGCGATCCCGATCTCGTCACCAGCAACCCGCTGTTCGGCCCCTCACCCGCCAATCCAAG
CGGATTCGAGTATCCGGCGCCGCGCAGCTTCGCGAACATTCCCGATCGCGAGGCCGGTGACCCGATGCCTGCCCCATATC
TCGGGCAACACAGCGAGGAAGTCCTCGCCGAACGCCTGGGCCTCTCCTCGGGCCAGATCGCCACGCTGATCGACCGGGGC
GTGGTGGCACGATCCGACAAAGACCAATGA

Upstream 100 bases:

>100_bases
CAGCCAGATCATGCAGTTGCAGATCGCCAAGCACCTGCTGCGCGAATTCGCAAGCGAAGGAAGCGTCTGGTGATCCCACC
CGCCTTGGGGAAGCGCTGAA

Downstream 100 bases:

>100_bases
TCAATCCCCCTCCCGTTCCCGTAGAGCGGATGTCGTGAAGGATTTACCGTGATGACCCAGCTTCGCCACGCCGCCATCGT
CGCCCCCATCCGCACCGCCG

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MYQLLNGLSIVEVSSFVASPTAGLYCAQMGAEVIRIDDSRGGLDYKRYMMTREGRSLSWENLNRAKKSVALDLQSAEGRE
LAVQLAQKTGQVITNLPLESFMAHERIAAGRPDLVSVRIMGWHDGRQAMDFTVNAASGYPLMTGPEEWDPKDAPPVNQIL
PAWDFITGAYCAFALLAGLRHRDATGQGSELRVPLGDVAIGTAFNAGAAPEMLYRDGDRERIGNAIWGAFGRDFRSRDGH
RFMVAALTPKQWKATVEAFDLAEAVAALEAELGVSFLASDHWRFVHRHRLFDLFQQAAEGFDYADLSQRMTRAGATFERY
RTMHEMARDPDLVTSNPLFGPSPANPSGFEYPAPRSFANIPDREAGDPMPAPYLGQHSEEVLAERLGLSSGQIATLIDRG
VVARSDKDQ

Sequences:

>Translated_409_residues
MYQLLNGLSIVEVSSFVASPTAGLYCAQMGAEVIRIDDSRGGLDYKRYMMTREGRSLSWENLNRAKKSVALDLQSAEGRE
LAVQLAQKTGQVITNLPLESFMAHERIAAGRPDLVSVRIMGWHDGRQAMDFTVNAASGYPLMTGPEEWDPKDAPPVNQIL
PAWDFITGAYCAFALLAGLRHRDATGQGSELRVPLGDVAIGTAFNAGAAPEMLYRDGDRERIGNAIWGAFGRDFRSRDGH
RFMVAALTPKQWKATVEAFDLAEAVAALEAELGVSFLASDHWRFVHRHRLFDLFQQAAEGFDYADLSQRMTRAGATFERY
RTMHEMARDPDLVTSNPLFGPSPANPSGFEYPAPRSFANIPDREAGDPMPAPYLGQHSEEVLAERLGLSSGQIATLIDRG
VVARSDKDQ
>Mature_409_residues
MYQLLNGLSIVEVSSFVASPTAGLYCAQMGAEVIRIDDSRGGLDYKRYMMTREGRSLSWENLNRAKKSVALDLQSAEGRE
LAVQLAQKTGQVITNLPLESFMAHERIAAGRPDLVSVRIMGWHDGRQAMDFTVNAASGYPLMTGPEEWDPKDAPPVNQIL
PAWDFITGAYCAFALLAGLRHRDATGQGSELRVPLGDVAIGTAFNAGAAPEMLYRDGDRERIGNAIWGAFGRDFRSRDGH
RFMVAALTPKQWKATVEAFDLAEAVAALEAELGVSFLASDHWRFVHRHRLFDLFQQAAEGFDYADLSQRMTRAGATFERY
RTMHEMARDPDLVTSNPLFGPSPANPSGFEYPAPRSFANIPDREAGDPMPAPYLGQHSEEVLAERLGLSSGQIATLIDRG
VVARSDKDQ

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=409, Percent_Identity=23.2273838630807, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI300863124, Length=436, Percent_Identity=23.6238532110092, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24648431, Length=431, Percent_Identity=22.0417633410673, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 45026; Mature: 45026

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQLLNGLSIVEVSSFVASPTAGLYCAQMGAEVIRIDDSRGGLDYKRYMMTREGRSLSWE
CCHHHCCCHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCHH
NLNRAKKSVALDLQSAEGRELAVQLAQKTGQVITNLPLESFMAHERIAAGRPDLVSVRIM
HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEE
GWHDGRQAMDFTVNAASGYPLMTGPEEWDPKDAPPVNQILPAWDFITGAYCAFALLAGLR
EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HRDATGQGSELRVPLGDVAIGTAFNAGAAPEMLYRDGDRERIGNAIWGAFGRDFRSRDGH
HCCCCCCCCEEEEECCCEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
RFMVAALTPKQWKATVEAFDLAEAVAALEAELGVSFLASDHWRFVHRHRLFDLFQQAAEG
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
FDYADLSQRMTRAGATFERYRTMHEMARDPDLVTSNPLFGPSPANPSGFEYPAPRSFANI
CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDREAGDPMPAPYLGQHSEEVLAERLGLSSGQIATLIDRGVVARSDKDQ
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MYQLLNGLSIVEVSSFVASPTAGLYCAQMGAEVIRIDDSRGGLDYKRYMMTREGRSLSWE
CCHHHCCCHHHHHHHHHCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCCCCHH
NLNRAKKSVALDLQSAEGRELAVQLAQKTGQVITNLPLESFMAHERIAAGRPDLVSVRIM
HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEE
GWHDGRQAMDFTVNAASGYPLMTGPEEWDPKDAPPVNQILPAWDFITGAYCAFALLAGLR
EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HRDATGQGSELRVPLGDVAIGTAFNAGAAPEMLYRDGDRERIGNAIWGAFGRDFRSRDGH
HCCCCCCCCEEEEECCCEEECCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
RFMVAALTPKQWKATVEAFDLAEAVAALEAELGVSFLASDHWRFVHRHRLFDLFQQAAEG
EEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
FDYADLSQRMTRAGATFERYRTMHEMARDPDLVTSNPLFGPSPANPSGFEYPAPRSFANI
CCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDREAGDPMPAPYLGQHSEEVLAERLGLSSGQIATLIDRGVVARSDKDQ
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]