| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199191
Identifier: 87199191
GI number: 87199191
Start: 1210124
End: 1210504
Strand: Direct
Name: 87199191
Synonym: Saro_1169
Alternate gene names: NA
Gene position: 1210124-1210504 (Clockwise)
Preceding gene: 87199189
Following gene: 87199192
Centisome position: 33.98
GC content: 69.03
Gene sequence:
>381_bases ATGCGCAAGACTGTTCTCGCTGCCGTTCTCTCGACCCTCGTCGCCGGCATTGCCACCCCGGCGCTGGCCCACGACAACGA CCGCTATCCGGGCGGCAACCGCGCCGAAGCGGCCTACATGACGCCTGGTCGCAACGCCGAGATCCGCCGCGACATCTGGC AGCTCGACAACCGCATCGACCGTGCCCAGCGCAATCGCGCCATCTCGCCCCGCGAGGCGCAGGGCCTGCGCCGCGATGCG CGCGACCTCAAGGCCACCTATACCCGTTATGCCAACCGTGGGCTTTCGGCGGGCGAATATCGCACGCTCGAACGCCGCGT CGCCAACATCACTCAGCGTCTGCGCGCCGAGAAGTGGGACCGCGACGGCCGTCGCGGCTGA
Upstream 100 bases:
>100_bases CACTTTCTTACAATTTGCCCGAAAGTCGCGACGGGTCGTTTGGCTGGCGTTCAGCCGCCGGACGGCAGTTTTGCCTCAAC GCATTCAAGGAGGAAACCTC
Downstream 100 bases:
>100_bases TCCTCTGCCCGAAAGTAAGCGCGCGGCGTAACAAAATTGCGCCGCGCCGCATCAAGGCCCGCCCTTTCCTGCTTGAATTG CAGCAAAGGCGGGCCTAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MRKTVLAAVLSTLVAGIATPALAHDNDRYPGGNRAEAAYMTPGRNAEIRRDIWQLDNRIDRAQRNRAISPREAQGLRRDA RDLKATYTRYANRGLSAGEYRTLERRVANITQRLRAEKWDRDGRRG
Sequences:
>Translated_126_residues MRKTVLAAVLSTLVAGIATPALAHDNDRYPGGNRAEAAYMTPGRNAEIRRDIWQLDNRIDRAQRNRAISPREAQGLRRDA RDLKATYTRYANRGLSAGEYRTLERRVANITQRLRAEKWDRDGRRG >Mature_126_residues MRKTVLAAVLSTLVAGIATPALAHDNDRYPGGNRAEAAYMTPGRNAEIRRDIWQLDNRIDRAQRNRAISPREAQGLRRDA RDLKATYTRYANRGLSAGEYRTLERRVANITQRLRAEKWDRDGRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14390; Mature: 14390
Theoretical pI: Translated: 11.72; Mature: 11.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTVLAAVLSTLVAGIATPALAHDNDRYPGGNRAEAAYMTPGRNAEIRRDIWQLDNRID CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH RAQRNRAISPREAQGLRRDARDLKATYTRYANRGLSAGEYRTLERRVANITQRLRAEKWD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC RDGRRG CCCCCC >Mature Secondary Structure MRKTVLAAVLSTLVAGIATPALAHDNDRYPGGNRAEAAYMTPGRNAEIRRDIWQLDNRID CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH RAQRNRAISPREAQGLRRDARDLKATYTRYANRGLSAGEYRTLERRVANITQRLRAEKWD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC RDGRRG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA