Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199078

Identifier: 87199078

GI number: 87199078

Start: 1097844

End: 1098842

Strand: Reverse

Name: 87199078

Synonym: Saro_1056

Alternate gene names: NA

Gene position: 1098842-1097844 (Counterclockwise)

Preceding gene: 87199079

Following gene: 87199077

Centisome position: 30.85

GC content: 70.97

Gene sequence:

>999_bases
ATGTCCGCTGAATGGCTGGTCGAACAGGGGATTGGCGAGACCCGCGCCATCCTCTGCGCCGACGCTGAAATCCGCGCTGC
CCGCATCGACTGGGGCGAGGCCCTGCGCCCCGGTCTAGTGGCCGAAGCCCGCCTCGTCTCGCGCCCGGCCGGAGGACGTC
GCGGCACCGTCCGCCTCGACAGCGGCGATGACGCGCTGATCGATCAGCTCCCGCGCGAGGCGACCGAGGGCGTCCGGCTG
GTCGTGCGCGTCGTGCGCGCCTCGATTGCGGAAAAGGGACGCACCAAGCTCCCCGTGGTCCGCGTCGCCCCCGGCGAAGT
GCCCACGCCGGCGCCGGATCTCGCCGCCCGGCTCGGCGCGGCCGGGGACCATGTCCGCATCCTTCCCGCCACCGACCGCA
CCTTTGTCGAATGTGGCTGGGACGAACTTGTGGAACAGGCGCAGAGCGGCGAGATTCCCTTTGCCGGCGGCTCGCTGCTG
GTCAGCCCGACCCCGGCCATGACCCTGATCGACGTCGATGGCTTCGGCCAGCCCGCGCAGCTCGCCCTTGCGGCTGTGCC
GGCCATCGCCGGCGCGCTGATGCGCCTGGACATCGGCGGCAACGTTGGCATCGATTTCCCCACCGTGCAGGACCGCAAGG
ACCGCCAGGCCATTGACGCCGCGCTCGAGGCCGCGCTCGCGGAAGCCGGCTGGCGGGGCGAGCGGACAGGAATGAACGGG
TTCGGCTTCGTCCAGCTCGTCTCCCGGCTCGAACGTCCCTCGCTCGTTGCGCGATACGCACGCAACCCGGCAGCCGCCAG
TGCTCGCATCCTGCTACGCCAGGCAGAGCGCGTGGCAGAGCCTGGCGCACTGCTGCTCTGCGCAAATCCGCGTACCCTCG
ATGCAATGCGGCCCGACTGGCTTGAGGAACTCGCACGCCGCACCGGTCGGGTCGTGCGGCTTGCACCCGATCCGGCCCTT
GCCCTTTCCGGCGGTTTCGCGCAGGCGGTGCCGCTATGA

Upstream 100 bases:

>100_bases
AGCGCCGAAGGTTTCTGCGCCTGGCTGTCGGGGAGCCATTCGGGCGTGGTCGGCCTGCCCCTCTACGAAACGCGCCGCCT
CCTTCGCGCTGCCGGACTCG

Downstream 100 bases:

>100_bases
CCATTCCCGCCGCCAAGCCCGGAAAGCGCTGCCCGATCTGCGGCAAGCCTCGCTCCGAAGCCCACAGCCCGTTCTGCTCC
ACCCGCTGCCGCGACCGCGA

Product: ribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MSAEWLVEQGIGETRAILCADAEIRAARIDWGEALRPGLVAEARLVSRPAGGRRGTVRLDSGDDALIDQLPREATEGVRL
VVRVVRASIAEKGRTKLPVVRVAPGEVPTPAPDLAARLGAAGDHVRILPATDRTFVECGWDELVEQAQSGEIPFAGGSLL
VSPTPAMTLIDVDGFGQPAQLALAAVPAIAGALMRLDIGGNVGIDFPTVQDRKDRQAIDAALEAALAEAGWRGERTGMNG
FGFVQLVSRLERPSLVARYARNPAAASARILLRQAERVAEPGALLLCANPRTLDAMRPDWLEELARRTGRVVRLAPDPAL
ALSGGFAQAVPL

Sequences:

>Translated_332_residues
MSAEWLVEQGIGETRAILCADAEIRAARIDWGEALRPGLVAEARLVSRPAGGRRGTVRLDSGDDALIDQLPREATEGVRL
VVRVVRASIAEKGRTKLPVVRVAPGEVPTPAPDLAARLGAAGDHVRILPATDRTFVECGWDELVEQAQSGEIPFAGGSLL
VSPTPAMTLIDVDGFGQPAQLALAAVPAIAGALMRLDIGGNVGIDFPTVQDRKDRQAIDAALEAALAEAGWRGERTGMNG
FGFVQLVSRLERPSLVARYARNPAAASARILLRQAERVAEPGALLLCANPRTLDAMRPDWLEELARRTGRVVRLAPDPAL
ALSGGFAQAVPL
>Mature_331_residues
SAEWLVEQGIGETRAILCADAEIRAARIDWGEALRPGLVAEARLVSRPAGGRRGTVRLDSGDDALIDQLPREATEGVRLV
VRVVRASIAEKGRTKLPVVRVAPGEVPTPAPDLAARLGAAGDHVRILPATDRTFVECGWDELVEQAQSGEIPFAGGSLLV
SPTPAMTLIDVDGFGQPAQLALAAVPAIAGALMRLDIGGNVGIDFPTVQDRKDRQAIDAALEAALAEAGWRGERTGMNGF
GFVQLVSRLERPSLVARYARNPAAASARILLRQAERVAEPGALLLCANPRTLDAMRPDWLEELARRTGRVVRLAPDPALA
LSGGFAQAVPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35162; Mature: 35031

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEWLVEQGIGETRAILCADAEIRAARIDWGEALRPGLVAEARLVSRPAGGRRGTVRLD
CCCCHHHHCCCCCCEEEEEECCCEEEEECCHHHHHCCCHHHHHHHHHCCCCCCCCEEEEC
SGDDALIDQLPREATEGVRLVVRVVRASIAEKGRTKLPVVRVAPGEVPTPAPDLAARLGA
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHCC
AGDHVRILPATDRTFVECGWDELVEQAQSGEIPFAGGSLLVSPTPAMTLIDVDGFGQPAQ
CCCCEEEEECCCCCCEECCHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEECCCCCHHH
LALAAVPAIAGALMRLDIGGNVGIDFPTVQDRKDRQAIDAALEAALAEAGWRGERTGMNG
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
FGFVQLVSRLERPSLVARYARNPAAASARILLRQAERVAEPGALLLCANPRTLDAMRPDW
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHH
LEELARRTGRVVRLAPDPALALSGGFAQAVPL
HHHHHHHCCCEEEECCCCCEEECCCCHHCCCC
>Mature Secondary Structure 
SAEWLVEQGIGETRAILCADAEIRAARIDWGEALRPGLVAEARLVSRPAGGRRGTVRLD
CCCHHHHCCCCCCEEEEEECCCEEEEECCHHHHHCCCHHHHHHHHHCCCCCCCCEEEEC
SGDDALIDQLPREATEGVRLVVRVVRASIAEKGRTKLPVVRVAPGEVPTPAPDLAARLGA
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHCC
AGDHVRILPATDRTFVECGWDELVEQAQSGEIPFAGGSLLVSPTPAMTLIDVDGFGQPAQ
CCCCEEEEECCCCCCEECCHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEECCCCCHHH
LALAAVPAIAGALMRLDIGGNVGIDFPTVQDRKDRQAIDAALEAALAEAGWRGERTGMNG
HHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
FGFVQLVSRLERPSLVARYARNPAAASARILLRQAERVAEPGALLLCANPRTLDAMRPDW
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHH
LEELARRTGRVVRLAPDPALALSGGFAQAVPL
HHHHHHHCCCEEEECCCCCEEECCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA