| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199077
Identifier: 87199077
GI number: 87199077
Start: 1097674
End: 1097847
Strand: Reverse
Name: 87199077
Synonym: Saro_1055
Alternate gene names: NA
Gene position: 1097847-1097674 (Counterclockwise)
Preceding gene: 87199078
Following gene: 87199074
Centisome position: 30.82
GC content: 70.11
Gene sequence:
>174_bases ATGACCATTCCCGCCGCCAAGCCCGGAAAGCGCTGCCCGATCTGCGGCAAGCCTCGCTCCGAAGCCCACAGCCCGTTCTG CTCCACCCGCTGCCGCGACCGCGATCTCGTGCGCTGGCTGGAGGACGGCTACGCCCTCCCCGGTCGCCCTGCCGAAGTGG ACCCTGAGGACTGA
Upstream 100 bases:
>100_bases ACTGGCTTGAGGAACTCGCACGCCGCACCGGTCGGGTCGTGCGGCTTGCACCCGATCCGGCCCTTGCCCTTTCCGGCGGT TTCGCGCAGGCGGTGCCGCT
Downstream 100 bases:
>100_bases ACTGCGCAATCCGGGCGCAGCGAAATTTTCCTGCACTTGGGGGCTTGCCAAGCCCGCCGCGCTTCGCCATAGGCGCGCTT CCAATCTGAACGGCCCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MTIPAAKPGKRCPICGKPRSEAHSPFCSTRCRDRDLVRWLEDGYALPGRPAEVDPED
Sequences:
>Translated_57_residues MTIPAAKPGKRCPICGKPRSEAHSPFCSTRCRDRDLVRWLEDGYALPGRPAEVDPED >Mature_56_residues TIPAAKPGKRCPICGKPRSEAHSPFCSTRCRDRDLVRWLEDGYALPGRPAEVDPED
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005584 - InterPro: IPR013088 [H]
Pfam domain/function: PF03884 DUF329 [H]
EC number: NA
Molecular weight: Translated: 6353; Mature: 6222
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPAAKPGKRCPICGKPRSEAHSPFCSTRCRDRDLVRWLEDGYALPGRPAEVDPED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TIPAAKPGKRCPICGKPRSEAHSPFCSTRCRDRDLVRWLEDGYALPGRPAEVDPED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]