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The map label for this gene is yhdE [C]

Identifier: 87199079

GI number: 87199079

Start: 1098832

End: 1099437

Strand: Reverse

Name: yhdE [C]

Synonym: Saro_1057

Alternate gene names: 87199079

Gene position: 1099437-1098832 (Counterclockwise)

Preceding gene: 87199080

Following gene: 87199078

Centisome position: 30.87

GC content: 70.3

Gene sequence:

>606_bases
ATGGCGGGCGAAGCCTCGCCCGTCGCCCAAAATCCGGAATTGGTCCTGGCCTCCGCCAGCCCGCGGCGCCTCGAACTCCT
GTCGCGCCTCGGCGTTTCCCCTGCGCGCGTTCTCGCCACCGACCTCGACGAATCCCCGCTCAAGGGTGAACGCCCCCGCG
ACCATGCCGTTCGCCTCGCGGCGGAAAAGGCGCGCGCCGCAGCCGCGCTTGCGCCCGGTTGCCTGGTTCTTGCCGGCGAC
ACCGTGGTCGGCACGGGAGCCCGCATCCTGCCCAAGGCCGAGGACGAGGCAACCGCGCGCCAGTGCCTCGCACTGCTTTC
GGGCCGCCGCCATCGCGTGTTCTCGGCCGTGGCCGTCATCACCCCCGATGGCACGCTGCGCGAGGCGCTGTCGGAGACAA
TCCTGCGCTTCAAGCGCCTCTCCGACGAGGAAATCGAAGCCTACATCGCGGGCGGCGAATGGCACGGCAAGGCTGGTGGC
TATGCGATCCAGGGCAGCGCCGAAGGTTTCTGCGCCTGGCTGTCGGGGAGCCATTCGGGCGTGGTCGGCCTGCCCCTCTA
CGAAACGCGCCGCCTCCTTCGCGCTGCCGGACTCGATGTCCGCTGA

Upstream 100 bases:

>100_bases
TCGGCGACGAAGTCCTGGTCGAACTGACGCCCTACGACCTGACGAAGGGGCGCATCACATACCGCTTCATGCCCGGTCGC
GGCGGTCCCGGCGGCTTCTG

Downstream 100 bases:

>100_bases
ATGGCTGGTCGAACAGGGGATTGGCGAGACCCGCGCCATCCTCTGCGCCGACGCTGAAATCCGCGCTGCCCGCATCGACT
GGGGCGAGGCCCTGCGCCCC

Product: maf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAGEASPVAQNPELVLASASPRRLELLSRLGVSPARVLATDLDESPLKGERPRDHAVRLAAEKARAAAALAPGCLVLAGD
TVVGTGARILPKAEDEATARQCLALLSGRRHRVFSAVAVITPDGTLREALSETILRFKRLSDEEIEAYIAGGEWHGKAGG
YAIQGSAEGFCAWLSGSHSGVVGLPLYETRRLLRAAGLDVR

Sequences:

>Translated_201_residues
MAGEASPVAQNPELVLASASPRRLELLSRLGVSPARVLATDLDESPLKGERPRDHAVRLAAEKARAAAALAPGCLVLAGD
TVVGTGARILPKAEDEATARQCLALLSGRRHRVFSAVAVITPDGTLREALSETILRFKRLSDEEIEAYIAGGEWHGKAGG
YAIQGSAEGFCAWLSGSHSGVVGLPLYETRRLLRAAGLDVR
>Mature_200_residues
AGEASPVAQNPELVLASASPRRLELLSRLGVSPARVLATDLDESPLKGERPRDHAVRLAAEKARAAAALAPGCLVLAGDT
VVGTGARILPKAEDEATARQCLALLSGRRHRVFSAVAVITPDGTLREALSETILRFKRLSDEEIEAYIAGGEWHGKAGGY
AIQGSAEGFCAWLSGSHSGVVGLPLYETRRLLRAAGLDVR

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=190, Percent_Identity=35.7894736842105, Blast_Score=89, Evalue=2e-18,
Organism=Homo sapiens, GI291045183, Length=184, Percent_Identity=34.7826086956522, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI310133124, Length=119, Percent_Identity=36.9747899159664, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI291045181, Length=119, Percent_Identity=36.9747899159664, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI1789646, Length=181, Percent_Identity=43.646408839779, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI87081830, Length=188, Percent_Identity=31.9148936170213, Blast_Score=77, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI193202443, Length=194, Percent_Identity=28.8659793814433, Blast_Score=80, Evalue=5e-16,
Organism=Drosophila melanogaster, GI78706856, Length=186, Percent_Identity=31.7204301075269, Blast_Score=78, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1057_NOVAD (Q2G9H1)

Other databases:

- EMBL:   CP000248
- RefSeq:   YP_496336.1
- ProteinModelPortal:   Q2G9H1
- SMR:   Q2G9H1
- STRING:   Q2G9H1
- GeneID:   3916353
- GenomeReviews:   CP000248_GR
- KEGG:   nar:Saro_1057
- NMPDR:   fig|48935.1.peg.2202
- eggNOG:   COG0424
- HOGENOM:   HBG414045
- OMA:   VVGLPLC
- ProtClustDB:   CLSK746364
- BioCyc:   NARO279238:SARO_1057-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305
- TIGRFAMs:   TIGR00172

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 21168; Mature: 21037

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: ACT_SITE 44-44

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGEASPVAQNPELVLASASPRRLELLSRLGVSPARVLATDLDESPLKGERPRDHAVRLA
CCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH
AEKARAAAALAPGCLVLAGDTVVGTGARILPKAEDEATARQCLALLSGRRHRVFSAVAVI
HHHHHHHHHCCCCEEEEECCEEECCCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEE
TPDGTLREALSETILRFKRLSDEEIEAYIAGGEWHGKAGGYAIQGSAEGFCAWLSGSHSG
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCEEEECCCCCEEEEECCCCCC
VVGLPLYETRRLLRAAGLDVR
EEECCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AGEASPVAQNPELVLASASPRRLELLSRLGVSPARVLATDLDESPLKGERPRDHAVRLA
CCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH
AEKARAAAALAPGCLVLAGDTVVGTGARILPKAEDEATARQCLALLSGRRHRVFSAVAVI
HHHHHHHHHCCCCEEEEECCEEECCCCEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEE
TPDGTLREALSETILRFKRLSDEEIEAYIAGGEWHGKAGGYAIQGSAEGFCAWLSGSHSG
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCCCEEEECCCCCEEEEECCCCCC
VVGLPLYETRRLLRAAGLDVR
EEECCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA