| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is purQ
Identifier: 87199054
GI number: 87199054
Start: 1071489
End: 1072166
Strand: Reverse
Name: purQ
Synonym: Saro_1032
Alternate gene names: 87199054
Gene position: 1072166-1071489 (Counterclockwise)
Preceding gene: 87199055
Following gene: 87199050
Centisome position: 30.1
GC content: 67.99
Gene sequence:
>678_bases ATGGCCTTCACTTCCGCCGTCATCACCTTCCCGGGCTCCAACTGCGATCGCGACATGGCGGTGGCGATCGAACAGGTCTG CGGCGGCACGGTCCACCGCGTCTGGCACGGCGATGCCGACCTGCCCGAAGGCCTTGATTTCATCGCACTGCCCGGCGGGT TCTCCTATGGCGACTACCTGCGCTCCGGCGCAATGGCGGCCCGTTCGCCGGTCATGCAGGCCGTCGTCCGCGCGGCCGAG CGCGGGGTGACGGTGCTCGGCGTCTGCAACGGCTTCCAGGTGCTGACCGAAGCCGGGCTTCTTCCCGGCGCGCTGATGCG CAACGCGGGCATCCGCTTTGTCTGCCGCGACGTGAAGCTGACGGTCGAGAACAACCAGTCGCTGTTCACCGCCGGCTACG ACGCGGGCCAGCAGATCACGATCCCCGTCGCGCACCACGACGGCAACTACTTCGCCGATGACGCGACGCTCGACCGTATC GAAGGCGAAGGCCGCGTCGCGTTCCGCTATGCCGAAGAGGTCAACGGTTCGGCCCGCAACATCGCCGGCGTCCTCAACGA CCGTGGCAACGTGCTGGGCATGATGCCGCACCCGGAACGCATGATCGAAGCCGCGCACGGCGGCAGCGACGGGCGCGCGC TGTTCGAAAGCGTCGTGCGGGGCCTGGTAGAGGCCTAA
Upstream 100 bases:
>100_bases CTTCGGACGAAGCGCTCGACGAGATGTGCCGCAAGCTCCTCGCCAACATGGTGATCGAGAACTACCGCATCGAAAAGGCG GCCTGAAAAGGAACTTCCCC
Downstream 100 bases:
>100_bases CCCGCCTTCCGCTCGAGGATGCGGGTCTGGCTGAACAGGCCGCGCGCATCCGCCGCGCTCATCGGGCGACCGAAGTAGTA GCCCTGGATCTTCTTGCAGC
Product: phosphoribosylformylglycinamidine synthase I
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase I; FGAM synthase I
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MAFTSAVITFPGSNCDRDMAVAIEQVCGGTVHRVWHGDADLPEGLDFIALPGGFSYGDYLRSGAMAARSPVMQAVVRAAE RGVTVLGVCNGFQVLTEAGLLPGALMRNAGIRFVCRDVKLTVENNQSLFTAGYDAGQQITIPVAHHDGNYFADDATLDRI EGEGRVAFRYAEEVNGSARNIAGVLNDRGNVLGMMPHPERMIEAAHGGSDGRALFESVVRGLVEA
Sequences:
>Translated_225_residues MAFTSAVITFPGSNCDRDMAVAIEQVCGGTVHRVWHGDADLPEGLDFIALPGGFSYGDYLRSGAMAARSPVMQAVVRAAE RGVTVLGVCNGFQVLTEAGLLPGALMRNAGIRFVCRDVKLTVENNQSLFTAGYDAGQQITIPVAHHDGNYFADDATLDRI EGEGRVAFRYAEEVNGSARNIAGVLNDRGNVLGMMPHPERMIEAAHGGSDGRALFESVVRGLVEA >Mature_224_residues AFTSAVITFPGSNCDRDMAVAIEQVCGGTVHRVWHGDADLPEGLDFIALPGGFSYGDYLRSGAMAARSPVMQAVVRAAER GVTVLGVCNGFQVLTEAGLLPGALMRNAGIRFVCRDVKLTVENNQSLFTAGYDAGQQITIPVAHHDGNYFADDATLDRIE GEGRVAFRYAEEVNGSARNIAGVLNDRGNVLGMMPHPERMIEAAHGGSDGRALFESVVRGLVEA
Specific function: Unknown
COG id: COG0047
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Escherichia coli, GI48994899, Length=183, Percent_Identity=36.6120218579235, Blast_Score=77, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6321498, Length=234, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24582111, Length=228, Percent_Identity=30.2631578947368, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24582109, Length=228, Percent_Identity=30.2631578947368, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17137292, Length=228, Percent_Identity=30.2631578947368, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURQ_NOVAD (Q2G9J6)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496311.1 - ProteinModelPortal: Q2G9J6 - SMR: Q2G9J6 - STRING: Q2G9J6 - GeneID: 3915814 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1032 - NMPDR: fig|48935.1.peg.1012 - eggNOG: COG0047 - HOGENOM: HBG302712 - OMA: HPENHVE - BioCyc: NARO279238:SARO_1032-MONOMER - GO: GO:0005737 - HAMAP: MF_00421 - InterPro: IPR017926 - InterPro: IPR011698 - InterPro: IPR010075 - PIRSF: PIRSF001586 - TIGRFAMs: TIGR01737
Pfam domain/function: PF07685 GATase_3
EC number: =6.3.5.3
Molecular weight: Translated: 23927; Mature: 23796
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS51273 GATASE_TYPE_1
Important sites: ACT_SITE 89-89 ACT_SITE 197-197 ACT_SITE 199-199
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFTSAVITFPGSNCDRDMAVAIEQVCGGTVHRVWHGDADLPEGLDFIALPGGFSYGDYL CCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHH RSGAMAARSPVMQAVVRAAERGVTVLGVCNGFQVLTEAGLLPGALMRNAGIRFVCRDVKL HHCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCHHHHHCCCCEEEEEEEEE TVENNQSLFTAGYDAGQQITIPVAHHDGNYFADDATLDRIEGEGRVAFRYAEEVNGSARN EEECCCEEEEECCCCCCEEEEEEEECCCCEEECCCHHHHCCCCCEEEEEEHHHCCCCHHH IAGVLNDRGNVLGMMPHPERMIEAAHGGSDGRALFESVVRGLVEA HHHHCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AFTSAVITFPGSNCDRDMAVAIEQVCGGTVHRVWHGDADLPEGLDFIALPGGFSYGDYL CCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHH RSGAMAARSPVMQAVVRAAERGVTVLGVCNGFQVLTEAGLLPGALMRNAGIRFVCRDVKL HHCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCHHHHHCCCCEEEEEEEEE TVENNQSLFTAGYDAGQQITIPVAHHDGNYFADDATLDRIEGEGRVAFRYAEEVNGSARN EEECCCEEEEECCCCCCEEEEEEEECCCCEEECCCHHHHCCCCCEEEEEEHHHCCCCHHH IAGVLNDRGNVLGMMPHPERMIEAAHGGSDGRALFESVVRGLVEA HHHHCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA