Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is yexA [H]

Identifier: 87199055

GI number: 87199055

Start: 1072181

End: 1072414

Strand: Reverse

Name: yexA [H]

Synonym: Saro_1033

Alternate gene names: 87199055

Gene position: 1072414-1072181 (Counterclockwise)

Preceding gene: 87199060

Following gene: 87199054

Centisome position: 30.11

GC content: 62.82

Gene sequence:

>234_bases
ATGAAGGTCCGCGTCATTGTCACCCTCAAGAACGGCGTGCTCGATCCGCAGGGTCGCGCCATCCATCACGCGCTCGAGGG
ACTCGGCTTTTCGGGCGTGAACGACGTGCGCGCCGGCCGGGTCATTGAACTCGACGTGGCCGACACCACTTCGGACGAAG
CGCTCGACGAGATGTGCCGCAAGCTCCTCGCCAACATGGTGATCGAGAACTACCGCATCGAAAAGGCGGCCTGA

Upstream 100 bases:

>100_bases
GGCACACAAACCTTGCTCTTCTCGGCTCGCGGTTGCATAGGCGCCGGCAAGAATCTCCCATCCCGGGAATCTCCACTCCA
AGCGTCCGAAAGGCCCCGCG

Downstream 100 bases:

>100_bases
AAAGGAACTTCCCCATGGCCTTCACTTCCGCCGTCATCACCTTCCCGGGCTCCAACTGCGATCGCGACATGGCGGTGGCG
ATCGAACAGGTCTGCGGCGG

Product: phosphoribosylformylglycinamidine synthetase PurS

Products: ADP; phosphate; 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine; L-glutamate

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MKVRVIVTLKNGVLDPQGRAIHHALEGLGFSGVNDVRAGRVIELDVADTTSDEALDEMCRKLLANMVIENYRIEKAA

Sequences:

>Translated_77_residues
MKVRVIVTLKNGVLDPQGRAIHHALEGLGFSGVNDVRAGRVIELDVADTTSDEALDEMCRKLLANMVIENYRIEKAA
>Mature_77_residues
MKVRVIVTLKNGVLDPQGRAIHHALEGLGFSGVNDVRAGRVIELDVADTTSDEALDEMCRKLLANMVIENYRIEKAA

Specific function: Unknown

COG id: COG1828

COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0062 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003850
- ProDom:   PD010362 [H]

Pfam domain/function: PF02700 PurS [H]

EC number: 6.3.5.3

Molecular weight: Translated: 8448; Mature: 8448

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRVIVTLKNGVLDPQGRAIHHALEGLGFSGVNDVRAGRVIELDVADTTSDEALDEMCR
CCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
KLLANMVIENYRIEKAA
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKVRVIVTLKNGVLDPQGRAIHHALEGLGFSGVNDVRAGRVIELDVADTTSDEALDEMCR
CCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH
KLLANMVIENYRIEKAA
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide; L-glutamine; H2O

Specific reaction: ATP + N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide + L-glutamine + H2O = ADP + phosphate + 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine + L-glutamate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3036807; 9384377 [H]