Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is fur [H]

Identifier: 87199006

GI number: 87199006

Start: 1027729

End: 1028151

Strand: Reverse

Name: fur [H]

Synonym: Saro_0984

Alternate gene names: 87199006

Gene position: 1028151-1027729 (Counterclockwise)

Preceding gene: 87199007

Following gene: 87199005

Centisome position: 28.87

GC content: 65.48

Gene sequence:

>423_bases
GTGCACCAGGCCATCGACATCGAAGCCCTCTGCGCAGAGCGCGGCCTTCGCATCACCGACCAGCGGCGGACGATCGCCCG
CGTCCTGTCGGAAAGCGACGACCACCCCGACGTGGAGAAGCTGCACGAACGCGCGTCAGCCATCGACCCGCGCATCTCGA
TCGCCACGGTCTACCGCACCGTGCGCCTCTTCGAAGAGGCGGGCATTCTCGACCGTCACGATTTCGGCGACGGCCGCGCC
CGCTACGAGGCGACGCCCGAGGCGCATCACGATCACCTGATCGACGTCGAATCCGGCAAGGTCATCGAATTCGTCGATCC
CGAACTCGAGCAGCTCCAGCGCCAGATCGCGGAGAAGCTGGGCTATCGCCTGGTGGATCACCGCATGGAGCTTTACGGCG
TCAAGCTTGAACGCGACGGCTGA

Upstream 100 bases:

>100_bases
ACGCGCCCCACAGGATTGCGCGCAATCGTATAGCGTGCGGTTGAAGATTCGGCCCGCCCGACTATAGATCGGCGGGCCGA
ATTGTTTTTGTAGGACCTAC

Downstream 100 bases:

>100_bases
TGCCATAAGCAAGCCGGTCATTTCGCTGGCCGGCCGGTTGCGCATCGCGCGGCGACTGCTGGCGATGGTTCTGCTGCTTC
TGGCCTGCGTGCCGCTCTAC

Product: ferric uptake regulator family protein

Products: NA

Alternate protein names: Ferric uptake regulator [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MHQAIDIEALCAERGLRITDQRRTIARVLSESDDHPDVEKLHERASAIDPRISIATVYRTVRLFEEAGILDRHDFGDGRA
RYEATPEAHHDHLIDVESGKVIEFVDPELEQLQRQIAEKLGYRLVDHRMELYGVKLERDG

Sequences:

>Translated_140_residues
MHQAIDIEALCAERGLRITDQRRTIARVLSESDDHPDVEKLHERASAIDPRISIATVYRTVRLFEEAGILDRHDFGDGRA
RYEATPEAHHDHLIDVESGKVIEFVDPELEQLQRQIAEKLGYRLVDHRMELYGVKLERDG
>Mature_140_residues
MHQAIDIEALCAERGLRITDQRRTIARVLSESDDHPDVEKLHERASAIDPRISIATVYRTVRLFEEAGILDRHDFGDGRA
RYEATPEAHHDHLIDVESGKVIEFVDPELEQLQRQIAEKLGYRLVDHRMELYGVKLERDG

Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

Organism=Escherichia coli, GI1786899, Length=126, Percent_Identity=45.2380952380952, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 16151; Mature: 16151

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQAIDIEALCAERGLRITDQRRTIARVLSESDDHPDVEKLHERASAIDPRISIATVYRT
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
VRLFEEAGILDRHDFGDGRARYEATPEAHHDHLIDVESGKVIEFVDPELEQLQRQIAEKL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHH
GYRLVDHRMELYGVKLERDG
HHHHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MHQAIDIEALCAERGLRITDQRRTIARVLSESDDHPDVEKLHERASAIDPRISIATVYRT
CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
VRLFEEAGILDRHDFGDGRARYEATPEAHHDHLIDVESGKVIEFVDPELEQLQRQIAEKL
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHH
GYRLVDHRMELYGVKLERDG
HHHHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9835040 [H]