| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is plsC [H]
Identifier: 87199005
GI number: 87199005
Start: 1026972
End: 1027745
Strand: Reverse
Name: plsC [H]
Synonym: Saro_0983
Alternate gene names: 87199005
Gene position: 1027745-1026972 (Counterclockwise)
Preceding gene: 87199006
Following gene: 87199004
Centisome position: 28.86
GC content: 65.37
Gene sequence:
>774_bases TTGAACGCGACGGCTGATGCCATAAGCAAGCCGGTCATTTCGCTGGCCGGCCGGTTGCGCATCGCGCGGCGACTGCTGGC GATGGTTCTGCTGCTTCTGGCCTGCGTGCCGCTCTACTATGTCTGGCGCATCCTTCGCCTGCACAACCCTTGGCCGCGCC TGTTCCTCGGCGGCATCGGATGGGCTGCGGGCGCACGCGTCAAGGTCGAGGGGGCGCCAAGCCGCAAGGGCGCGTTCCTG CTCGCCAACCACGTAAGCTGGCTCGACATTCCGGTCATCGCCGGCGCCAGTGGCAGCGCGTTCGTGGCGCATTCCGGGCT TGCCGGGCACGGCCTGCTCAAGTGGTTGTGCGACATGAACGACACCGTCTTCGTCGCACGGCACGACCGCCGTTCGGTCC ACACCCAGGTCGAACAGGTCCGCGCGGCCCTGACCGATACCGGGGCGCTGACGGTCTTTCCCGAAGGTACCACCAGTGAC GGCCGCAGCCTTTTGCCTTTCAAATCGTCGTTGCTGTCCGCGCTCGATCCCCCGCCGCCGGGAATCGCGATCCAGCCGGT CTGGCTGGATTACGGACCAGACGTTGCAGACATGGCATGGGTCGGCGACGAACACGGTCTCGACAACTTCCTCAAGATCC TCGCACGGCGAAAGTCACTGCCCGTCACGGTCCATTTCCTTGCGCCACTCCAGCCCGAAGAAACCGCCAGCCGCAAACTG ATGGCAACTGCCTCGCGTGAACGGATCCTCGCCGCGATGGGCCGCAACAGGTAG
Upstream 100 bases:
>100_bases GAATTCGTCGATCCCGAACTCGAGCAGCTCCAGCGCCAGATCGCGGAGAAGCTGGGCTATCGCCTGGTGGATCACCGCAT GGAGCTTTACGGCGTCAAGC
Downstream 100 bases:
>100_bases CCAAGCCTCGCCAAATCCAGTATCGGCGCGGCCCATGTCCTCCTCCGCACCTTCCTCCGCATCTCCCAAGACGTTCCGCG TCAAAAGCTTCGGCTGCCAG
Product: lyso-ornithine lipid acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNATADAISKPVISLAGRLRIARRLLAMVLLLLACVPLYYVWRILRLHNPWPRLFLGGIGWAAGARVKVEGAPSRKGAFL LANHVSWLDIPVIAGASGSAFVAHSGLAGHGLLKWLCDMNDTVFVARHDRRSVHTQVEQVRAALTDTGALTVFPEGTTSD GRSLLPFKSSLLSALDPPPPGIAIQPVWLDYGPDVADMAWVGDEHGLDNFLKILARRKSLPVTVHFLAPLQPEETASRKL MATASRERILAAMGRNR
Sequences:
>Translated_257_residues MNATADAISKPVISLAGRLRIARRLLAMVLLLLACVPLYYVWRILRLHNPWPRLFLGGIGWAAGARVKVEGAPSRKGAFL LANHVSWLDIPVIAGASGSAFVAHSGLAGHGLLKWLCDMNDTVFVARHDRRSVHTQVEQVRAALTDTGALTVFPEGTTSD GRSLLPFKSSLLSALDPPPPGIAIQPVWLDYGPDVADMAWVGDEHGLDNFLKILARRKSLPVTVHFLAPLQPEETASRKL MATASRERILAAMGRNR >Mature_257_residues MNATADAISKPVISLAGRLRIARRLLAMVLLLLACVPLYYVWRILRLHNPWPRLFLGGIGWAAGARVKVEGAPSRKGAFL LANHVSWLDIPVIAGASGSAFVAHSGLAGHGLLKWLCDMNDTVFVARHDRRSVHTQVEQVRAALTDTGALTVFPEGTTSD GRSLLPFKSSLLSALDPPPPGIAIQPVWLDYGPDVADMAWVGDEHGLDNFLKILARRKSLPVTVHFLAPLQPEETASRKL MATASRERILAAMGRNR
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 27926; Mature: 27926
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATADAISKPVISLAGRLRIARRLLAMVLLLLACVPLYYVWRILRLHNPWPRLFLGGIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC WAAGARVKVEGAPSRKGAFLLANHVSWLDIPVIAGASGSAFVAHSGLAGHGLLKWLCDMN CCCCCEEEECCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHCCC DTVFVARHDRRSVHTQVEQVRAALTDTGALTVFPEGTTSDGRSLLPFKSSLLSALDPPPP CEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECHHHHHHHHHCCCCCC GIAIQPVWLDYGPDVADMAWVGDEHGLDNFLKILARRKSLPVTVHFLAPLQPEETASRKL CCEEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH MATASRERILAAMGRNR HHHHHHHHHHHHHCCCC >Mature Secondary Structure MNATADAISKPVISLAGRLRIARRLLAMVLLLLACVPLYYVWRILRLHNPWPRLFLGGIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC WAAGARVKVEGAPSRKGAFLLANHVSWLDIPVIAGASGSAFVAHSGLAGHGLLKWLCDMN CCCCCEEEECCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHHHCCC DTVFVARHDRRSVHTQVEQVRAALTDTGALTVFPEGTTSDGRSLLPFKSSLLSALDPPPP CEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECHHHHHHHHHCCCCCC GIAIQPVWLDYGPDVADMAWVGDEHGLDNFLKILARRKSLPVTVHFLAPLQPEETASRKL CCEEEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH MATASRERILAAMGRNR HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8748025 [H]