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The map label for this gene is 87198956

Identifier: 87198956

GI number: 87198956

Start: 982012

End: 982758

Strand: Reverse

Name: 87198956

Synonym: Saro_0934

Alternate gene names: NA

Gene position: 982758-982012 (Counterclockwise)

Preceding gene: 87198958

Following gene: 87198954

Centisome position: 27.59

GC content: 66.53

Gene sequence:

>747_bases
ATGAACCACGTTCCCGGCACGCGCCTGTTCGACCGCGCCCTCGTGCGCCTTGCTCCCGAAGATCCGGCCGAGGATGTGGC
TGCCTTCCTGCAAGGTCTCGTCACCAACGACGTGAAGGGAGTGTTGCCGGTCTGGACCGCTTTGCTCACCCCGCAAGGCA
AGGTCCTGTTCGATTTCATCGTCTGGCCCGACGGCAAGGGCCTGCTGCTGGAATGCGAGGCATCGGCGGCGGATGCGCTT
GCCAAGCGGCTGACGCTCTACCGCCTGCGCCGCAAGATCGCGATCTCGCGTGCGGACGACCTTGCCGCACACTGGGAAGA
CCACCCCGGCGACGGCGGCGCAAGCGACCCGCGCCTGCGCGCGCTCGGCCAGCGCTGGATCGCGCCGGTCAGCGACAACG
ACGTGGGCGTGGACATGGCCTATCGTGAACATCGCCTCAAGCTCGGCGTGCCGGAAGGGCGCGCGGAACTGGGCGATGGC
GAAGTGCTCTGGCTGGAATGCAACGCCGCCGACCTCAACGGGGTCAGCTTCACCAAGGGCTGCTACGTCGGGCAGGAAAA
CACCGCCCGCATGAATTGGCGACAGAAGGTCAACCGACGGCTGATCGTGGTTCCGCTGGAACAGTCCGATCCTGCACGCC
AGCGCATCGCCTATCCTGAACTGGGCCTGGCGGTCGATCATCGGCGGGTCGAGGATATCCCCCCCGCACTGGCCCCTTCC
TGGATGGACCTCAGCCCTCCGGACTGA

Upstream 100 bases:

>100_bases
TCGCGGTCGCGCAGGTGGACATGCCAGTCGTCGGGGCGGCGGATCGTCAGCGTCTCGGTCATGCCTTCCCCTTAGCGATG
GTCCTGCCTATCTTCCACCC

Downstream 100 bases:

>100_bases
CCTCGTCCCGCCTGAGCATACTTTCGACCAGCATCTGCTCTGCCCGGTCGCGCGCGGCATCGCGGGGCAGTTCCAGCGCC
TGGGACAACGGCCCGCCCAT

Product: aminomethyl transferase

Products: NA

Alternate protein names: Aminomethyl Transferase Family Protein; Aminomethyltransferase; Glycine Cleavage T-Protein; Glycine Cleavage System T Protein Aminomethyltransferase; Aminomethyltransferase Protein; Aminomethyltransferase Family Protein; Glycine Cleavage T-Protein Barrel; Glycine Cleavage T-Protein C-Terminal Barrel; Aminomethyl Transferase; TRNA-Modifying Protein YgfZ; Aminomethyltransferase Related GcvT; Large Exoprotein; GcvT-Like Aminomethyltransferase Protein

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNHVPGTRLFDRALVRLAPEDPAEDVAAFLQGLVTNDVKGVLPVWTALLTPQGKVLFDFIVWPDGKGLLLECEASAADAL
AKRLTLYRLRRKIAISRADDLAAHWEDHPGDGGASDPRLRALGQRWIAPVSDNDVGVDMAYREHRLKLGVPEGRAELGDG
EVLWLECNAADLNGVSFTKGCYVGQENTARMNWRQKVNRRLIVVPLEQSDPARQRIAYPELGLAVDHRRVEDIPPALAPS
WMDLSPPD

Sequences:

>Translated_248_residues
MNHVPGTRLFDRALVRLAPEDPAEDVAAFLQGLVTNDVKGVLPVWTALLTPQGKVLFDFIVWPDGKGLLLECEASAADAL
AKRLTLYRLRRKIAISRADDLAAHWEDHPGDGGASDPRLRALGQRWIAPVSDNDVGVDMAYREHRLKLGVPEGRAELGDG
EVLWLECNAADLNGVSFTKGCYVGQENTARMNWRQKVNRRLIVVPLEQSDPARQRIAYPELGLAVDHRRVEDIPPALAPS
WMDLSPPD
>Mature_248_residues
MNHVPGTRLFDRALVRLAPEDPAEDVAAFLQGLVTNDVKGVLPVWTALLTPQGKVLFDFIVWPDGKGLLLECEASAADAL
AKRLTLYRLRRKIAISRADDLAAHWEDHPGDGGASDPRLRALGQRWIAPVSDNDVGVDMAYREHRLKLGVPEGRAELGDG
EVLWLECNAADLNGVSFTKGCYVGQENTARMNWRQKVNRRLIVVPLEQSDPARQRIAYPELGLAVDHRRVEDIPPALAPS
WMDLSPPD

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58197556, Length=243, Percent_Identity=35.3909465020576, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71985951, Length=201, Percent_Identity=34.8258706467662, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24645123, Length=234, Percent_Identity=33.7606837606838, Blast_Score=109, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27450; Mature: 27450

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHVPGTRLFDRALVRLAPEDPAEDVAAFLQGLVTNDVKGVLPVWTALLTPQGKVLFDFI
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEE
VWPDGKGLLLECEASAADALAKRLTLYRLRRKIAISRADDLAAHWEDHPGDGGASDPRLR
EECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHH
ALGQRWIAPVSDNDVGVDMAYREHRLKLGVPEGRAELGDGEVLWLECNAADLNGVSFTKG
HHHHHHCCCCCCCCCCEEHHHHHCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEECCC
CYVGQENTARMNWRQKVNRRLIVVPLEQSDPARQRIAYPELGLAVDHRRVEDIPPALAPS
EECCCCCCHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCCCCCEECCCHHHHCCCCCCCC
WMDLSPPD
CCCCCCCC
>Mature Secondary Structure
MNHVPGTRLFDRALVRLAPEDPAEDVAAFLQGLVTNDVKGVLPVWTALLTPQGKVLFDFI
CCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEE
VWPDGKGLLLECEASAADALAKRLTLYRLRRKIAISRADDLAAHWEDHPGDGGASDPRLR
EECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHH
ALGQRWIAPVSDNDVGVDMAYREHRLKLGVPEGRAELGDGEVLWLECNAADLNGVSFTKG
HHHHHHCCCCCCCCCCEEHHHHHCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEECCC
CYVGQENTARMNWRQKVNRRLIVVPLEQSDPARQRIAYPELGLAVDHRRVEDIPPALAPS
EECCCCCCHHHHHHHHHCCEEEEEECCCCCCHHHHCCCCCCCCEECCCHHHHCCCCCCCC
WMDLSPPD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA