| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198954
Identifier: 87198954
GI number: 87198954
Start: 980516
End: 981400
Strand: Reverse
Name: 87198954
Synonym: Saro_0932
Alternate gene names: NA
Gene position: 981400-980516 (Counterclockwise)
Preceding gene: 87198956
Following gene: 87198950
Centisome position: 27.56
GC content: 64.75
Gene sequence:
>885_bases ATGACCCCTACTCTCGCACTAGAGCGCAGCGCCGCATCCGGCAAGGTTGCGCCGACGCCCGCCGATCTCAGCATCACGGT GCGCGACCGCCGCTTCGGTCGAAATTCGCCTCCGGGCAGGTGGTGGTTGGCGGGCGATCCCGTGGCGACGGCGTGGCACA ACGCGCTTTCCGCCACGTTCCCGCGTGGCGAAGCCTTCTTCATCGAAGCGGTCAAGGCGCACCGCGAAGGCGCTTCGCCC AAGCTCGAGGCTGAAATCCGCGCCTTCGTGAAGCAGGAAATCAACCATACGCGCGAACATATCGCCTTCAACCGCGCGGC GGAGAACGCCGGCTACGACATCGCCCGGATCGACAAGCGGGTCGAGGAAATGCTCGCCCTGACCAAGGATCGCCCGGTGA TCCTGAACCTTGCGGCGACCATGGCGCTCGAACATTATACCGCGATGATGGCGCACGAATTCCTCGCCAACCCGGCACAT TTCGCCGGCGCAGAGCAGGAAGCGGCCGACATGTGGCGCTGGCACGCGATCGAGGAGATCGAGCACAAGGGCGTCGCCTA TGACACCTGGCTTCATGCGACCCGCGACTGGAGCCGGTGGAAGCGCTGGAAGGTGAAGAGCCTGATGATGGTCGTCGTCA CCAAGAACTTCATCACCCACCGCGTCGAGGATACGCTCGACCTGCTGGCACAGGACGGGTTGACCGGGGCCAAGTGGAAG TGGCGCCTTGCCGCCTACCTGCTGTGGAAGCCCGGCGTGATCCGCCGCATCCTGCCCGCGTGGCTCGGCTACTTCCTGCC CGGCTTCCATCCGTGGAAGCACGACGATCGTGCGCTGATCGGCAAGGCTGACAGCGAGTTTACCGATGCGGTGATGCCGG GCTGA
Upstream 100 bases:
>100_bases GCGCGCAGCCTCGAGGGCGGCCATCCGGCTTTCCTCAGGTGAGAGACGCTTTCTTATTGACATTGATGTAAGCAAGCCTA GATTGCGGCCCATGACAGCC
Downstream 100 bases:
>100_bases CCATCCGGTCAGGCCTCCAGTCACCGCATCATCGTCACCGCGTCGCCGTCAGGCCGCCCGGCGCATCGGCTCGAAACCGC CGTCCTCGGGCCCGTCGCAA
Product: FF domain-containing protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; FF Domain Protein; Conserved Protein UCP; Metal-Dependent Hydrolase-Like; Phthalate 4 5-Dioxygenase; Metal Hydrolase
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTPTLALERSAASGKVAPTPADLSITVRDRRFGRNSPPGRWWLAGDPVATAWHNALSATFPRGEAFFIEAVKAHREGASP KLEAEIRAFVKQEINHTREHIAFNRAAENAGYDIARIDKRVEEMLALTKDRPVILNLAATMALEHYTAMMAHEFLANPAH FAGAEQEAADMWRWHAIEEIEHKGVAYDTWLHATRDWSRWKRWKVKSLMMVVVTKNFITHRVEDTLDLLAQDGLTGAKWK WRLAAYLLWKPGVIRRILPAWLGYFLPGFHPWKHDDRALIGKADSEFTDAVMPG
Sequences:
>Translated_294_residues MTPTLALERSAASGKVAPTPADLSITVRDRRFGRNSPPGRWWLAGDPVATAWHNALSATFPRGEAFFIEAVKAHREGASP KLEAEIRAFVKQEINHTREHIAFNRAAENAGYDIARIDKRVEEMLALTKDRPVILNLAATMALEHYTAMMAHEFLANPAH FAGAEQEAADMWRWHAIEEIEHKGVAYDTWLHATRDWSRWKRWKVKSLMMVVVTKNFITHRVEDTLDLLAQDGLTGAKWK WRLAAYLLWKPGVIRRILPAWLGYFLPGFHPWKHDDRALIGKADSEFTDAVMPG >Mature_293_residues TPTLALERSAASGKVAPTPADLSITVRDRRFGRNSPPGRWWLAGDPVATAWHNALSATFPRGEAFFIEAVKAHREGASPK LEAEIRAFVKQEINHTREHIAFNRAAENAGYDIARIDKRVEEMLALTKDRPVILNLAATMALEHYTAMMAHEFLANPAHF AGAEQEAADMWRWHAIEEIEHKGVAYDTWLHATRDWSRWKRWKVKSLMMVVVTKNFITHRVEDTLDLLAQDGLTGAKWKW RLAAYLLWKPGVIRRILPAWLGYFLPGFHPWKHDDRALIGKADSEFTDAVMPG
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33435; Mature: 33303
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTLALERSAASGKVAPTPADLSITVRDRRFGRNSPPGRWWLAGDPVATAWHNALSATF CCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHCCC PRGEAFFIEAVKAHREGASPKLEAEIRAFVKQEINHTREHIAFNRAAENAGYDIARIDKR CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VEEMLALTKDRPVILNLAATMALEHYTAMMAHEFLANPAHFAGAEQEAADMWRWHAIEEI HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH EHKGVAYDTWLHATRDWSRWKRWKVKSLMMVVVTKNFITHRVEDTLDLLAQDGLTGAKWK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH WRLAAYLLWKPGVIRRILPAWLGYFLPGFHPWKHDDRALIGKADSEFTDAVMPG HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHCCCC >Mature Secondary Structure TPTLALERSAASGKVAPTPADLSITVRDRRFGRNSPPGRWWLAGDPVATAWHNALSATF CCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHCCC PRGEAFFIEAVKAHREGASPKLEAEIRAFVKQEINHTREHIAFNRAAENAGYDIARIDKR CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH VEEMLALTKDRPVILNLAATMALEHYTAMMAHEFLANPAHFAGAEQEAADMWRWHAIEEI HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH EHKGVAYDTWLHATRDWSRWKRWKVKSLMMVVVTKNFITHRVEDTLDLLAQDGLTGAKWK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH WRLAAYLLWKPGVIRRILPAWLGYFLPGFHPWKHDDRALIGKADSEFTDAVMPG HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA