| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is yhhX [C]
Identifier: 87198799
GI number: 87198799
Start: 824644
End: 825819
Strand: Reverse
Name: yhhX [C]
Synonym: Saro_0776
Alternate gene names: 87198799
Gene position: 825819-824644 (Counterclockwise)
Preceding gene: 87198800
Following gene: 87198798
Centisome position: 23.19
GC content: 68.37
Gene sequence:
>1176_bases ATGGAACCTGTCAGGATCGGCGTCGTCGGCGCGGGCGATATCAGCGCGGTCTATCTCAATGCGATCACGCGCTCGTCTGC GCTGCATCTGCGCGCGATAGCCACGCGTGACCCGCAGGCGATCGCGGAAAAGGCACGAGGCTTGGGGGCGCGGGCCATGT CGGTGGCAGAACTGCTGGCCGACGAGGCGATCGAACTGGTCGTGAACCTCACGCCGGGCGTGGCGCACGAAGAGATCAAC GGTGCGGCGCTGGAGGCGGGCAAGCACGTCTATTCCGAAAAGCCCTTTGCCCTCTCGCACGCGGCGGCGCGGCGGCTGGC GGACATCGCCGAGGGCCGGGGGCTGCTGATCGGCTCGGCGCCGGACACCTTCTACGGCAGCGCGCACCAGGCCGCGCGCA AGGCGCTTGATGCGGGCGCGATCGGCAGGCCGGTGTTCGGCACCTCGTTCCTCGGGCTGCCGGGGCTCGAGCTGTTCCAC CCGAGCCCGGAGGCGTTCTACCGTCCGGGGGGCGAGCCGCCGTTCGATGCGGGGCCCTATTACACGACGATGTGGATCAA CCTGCTGGGTCCGGTGAAGCGGGTGTTCTCGGTTTCGGGCGCAGGCAAGACAGAGCGCAAGATCCTGCGCGGACCTCGGC AGGGCACACCCTTTCCGGTCAAGGTCGACACCACATTCAACACGGTACTGGAGTTCGAAGGGGCCTCGGTCAGCTTTATC ATCTCGCTCGACGTCGTGGTGCCGACATTGCGCCCGGGCGAGCTGTTCGGCTCGAATGGCATTCTGGCCATGGCCGACCC GATGTTCTTCGGCGGCGAGCCTGCGGTGATCGCGCCGCCGCTGCCGCGCACGGCCCTTGCCACCGCTGAGCAGGGCTTTG CCACGCCCAACCGGCATGACCACACGGGGCGCGTCGTGGCCGACTATCGTGGCGCCGGGCTGGTCGATCTCGCGCTCGCA ATCCGCACCGGCAGCAGGCACCGCACCGGGGCAGAATTCATCGTCCACTCGGTCGAGGTGATGGAGGCCATCGTCAGGTC GGCCAGAACGCGCGCGGTGGTCGACCTCGGCTCCACCTGTGAACGCCCGGCGCCCATCGATCCCGAGGCGGACGCGGCGC TGATCGCCTTAACGGCATCGCCCTTCGATCTGGCCGAGAGCAGCTCGGCCCACTGA
Upstream 100 bases:
>100_bases ACGCAGGGCGATTGACTTCGTCGCGCGATAATCTAATCAACGATTAAATTGTCAGTGGGCGAAAGGCGCCAGTCGGCCTG CGCCTGCGCGGGAGGAATGC
Downstream 100 bases:
>100_bases TTTCCTGCCCTTTGCTGGAGTTTCCCCTAGTGTCCTCAACCAACAGCATACTCGCCGCCGGCCTCGCTTTGCTCGCTCCT GTCAGCGCCTTCGCCGCCGA
Product: oxidoreductase-like protein
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; Dehydrogenase; Oxidoreductase; Oxidoreductase Protein; NADH-Dependent Dehydrogenase; Oxidoreductase Family Protein; Dehydrogenase/Oxidoreductase; GFO/IDH/MocA Family Oxidoreductase; MviM Protein; GFO/IDH/MocA Dehydrogenase; Alcohol Dehydrogenase; Oxidoreductase-Like; Aldo/Keto Reductase
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MEPVRIGVVGAGDISAVYLNAITRSSALHLRAIATRDPQAIAEKARGLGARAMSVAELLADEAIELVVNLTPGVAHEEIN GAALEAGKHVYSEKPFALSHAAARRLADIAEGRGLLIGSAPDTFYGSAHQAARKALDAGAIGRPVFGTSFLGLPGLELFH PSPEAFYRPGGEPPFDAGPYYTTMWINLLGPVKRVFSVSGAGKTERKILRGPRQGTPFPVKVDTTFNTVLEFEGASVSFI ISLDVVVPTLRPGELFGSNGILAMADPMFFGGEPAVIAPPLPRTALATAEQGFATPNRHDHTGRVVADYRGAGLVDLALA IRTGSRHRTGAEFIVHSVEVMEAIVRSARTRAVVDLGSTCERPAPIDPEADAALIALTASPFDLAESSSAH
Sequences:
>Translated_391_residues MEPVRIGVVGAGDISAVYLNAITRSSALHLRAIATRDPQAIAEKARGLGARAMSVAELLADEAIELVVNLTPGVAHEEIN GAALEAGKHVYSEKPFALSHAAARRLADIAEGRGLLIGSAPDTFYGSAHQAARKALDAGAIGRPVFGTSFLGLPGLELFH PSPEAFYRPGGEPPFDAGPYYTTMWINLLGPVKRVFSVSGAGKTERKILRGPRQGTPFPVKVDTTFNTVLEFEGASVSFI ISLDVVVPTLRPGELFGSNGILAMADPMFFGGEPAVIAPPLPRTALATAEQGFATPNRHDHTGRVVADYRGAGLVDLALA IRTGSRHRTGAEFIVHSVEVMEAIVRSARTRAVVDLGSTCERPAPIDPEADAALIALTASPFDLAESSSAH >Mature_391_residues MEPVRIGVVGAGDISAVYLNAITRSSALHLRAIATRDPQAIAEKARGLGARAMSVAELLADEAIELVVNLTPGVAHEEIN GAALEAGKHVYSEKPFALSHAAARRLADIAEGRGLLIGSAPDTFYGSAHQAARKALDAGAIGRPVFGTSFLGLPGLELFH PSPEAFYRPGGEPPFDAGPYYTTMWINLLGPVKRVFSVSGAGKTERKILRGPRQGTPFPVKVDTTFNTVLEFEGASVSFI ISLDVVVPTLRPGELFGSNGILAMADPMFFGGEPAVIAPPLPRTALATAEQGFATPNRHDHTGRVVADYRGAGLVDLALA IRTGSRHRTGAEFIVHSVEVMEAIVRSARTRAVVDLGSTCERPAPIDPEADAALIALTASPFDLAESSSAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 41092; Mature: 41092
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPVRIGVVGAGDISAVYLNAITRSSALHLRAIATRDPQAIAEKARGLGARAMSVAELLA CCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHH DEAIELVVNLTPGVAHEEINGAALEAGKHVYSEKPFALSHAAARRLADIAEGRGLLIGSA HHHHEEEEECCCCCCHHHCCCHHHHHCHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECC PDTFYGSAHQAARKALDAGAIGRPVFGTSFLGLPGLELFHPSPEAFYRPGGEPPFDAGPY CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCCCCCCCCCCCC YTTMWINLLGPVKRVFSVSGAGKTERKILRGPRQGTPFPVKVDTTFNTVLEFEGASVSFI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCEEEE ISLDVVVPTLRPGELFGSNGILAMADPMFFGGEPAVIAPPLPRTALATAEQGFATPNRHD EEEEEEECCCCCCHHCCCCCEEEEECCEEECCCCCEEECCCCHHHHHHHHHCCCCCCCCC HTGRVVADYRGAGLVDLALAIRTGSRHRTGAEFIVHSVEVMEAIVRSARTRAVVDLGSTC CCCCEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCC ERPAPIDPEADAALIALTASPFDLAESSSAH CCCCCCCCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MEPVRIGVVGAGDISAVYLNAITRSSALHLRAIATRDPQAIAEKARGLGARAMSVAELLA CCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHH DEAIELVVNLTPGVAHEEINGAALEAGKHVYSEKPFALSHAAARRLADIAEGRGLLIGSA HHHHEEEEECCCCCCHHHCCCHHHHHCHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEECC PDTFYGSAHQAARKALDAGAIGRPVFGTSFLGLPGLELFHPSPEAFYRPGGEPPFDAGPY CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCCCCCCCCCCCC YTTMWINLLGPVKRVFSVSGAGKTERKILRGPRQGTPFPVKVDTTFNTVLEFEGASVSFI HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCEEEE ISLDVVVPTLRPGELFGSNGILAMADPMFFGGEPAVIAPPLPRTALATAEQGFATPNRHD EEEEEEECCCCCCHHCCCCCEEEEECCEEECCCCCEEECCCCHHHHHHHHHCCCCCCCCC HTGRVVADYRGAGLVDLALAIRTGSRHRTGAEFIVHSVEVMEAIVRSARTRAVVDLGSTC CCCCEEEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCC ERPAPIDPEADAALIALTASPFDLAESSSAH CCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA