| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198800
Identifier: 87198800
GI number: 87198800
Start: 825873
End: 826217
Strand: Reverse
Name: 87198800
Synonym: Saro_0777
Alternate gene names: NA
Gene position: 826217-825873 (Counterclockwise)
Preceding gene: 87198806
Following gene: 87198799
Centisome position: 23.2
GC content: 64.93
Gene sequence:
>345_bases ATGCTTCATCGATCCGGCTCGTCCATGACTATGCCGAAGGGGTTTGGCCGTGGCGCTATCGCGCCGAGCAGCGGATCGCG GTCTCAGGCGAAGGGGTGCGGCTGTGGATGGCGGTCACCAACCTCGGCCCGGGTCCCATGCCGGCGGACTTGCTTCCATC CCTATTTCCCGGGCGATGACAGTGCCGTGCACAATGGCCCGCATCCCGGCGAGTGGGAAACTTCGCCCGATGGCCTGCCG CTGGCGCTGGCCGATGCGGGCAAGGCGGTGGACTGGTGGCAGGGCGCGACACATCCGGACGCAGGGCGATTGACTTCGTC GCGCGATAATCTAATCAACGATTAA
Upstream 100 bases:
>100_bases GGGGTCGACCATTGCCTGCCGTCCAACTTTCCCAAAGCTTGGCATCCCCATGCACTGCACGGCTATGGCTGAGTGCGGCC GTGGCGGGTGATCGCGCGTG
Downstream 100 bases:
>100_bases ATTGTCAGTGGGCGAAAGGCGCCAGTCGGCCTGCGCCTGCGCGGGAGGAATGCATGGAACCTGTCAGGATCGGCGTCGTC GGCGCGGGCGATATCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MLHRSGSSMTMPKGFGRGAIAPSSGSRSQAKGCGCGWRSPTSARVPCRRTCFHPYFPGDDSAVHNGPHPGEWETSPDGLP LALADAGKAVDWWQGATHPDAGRLTSSRDNLIND
Sequences:
>Translated_114_residues MLHRSGSSMTMPKGFGRGAIAPSSGSRSQAKGCGCGWRSPTSARVPCRRTCFHPYFPGDDSAVHNGPHPGEWETSPDGLP LALADAGKAVDWWQGATHPDAGRLTSSRDNLIND >Mature_114_residues MLHRSGSSMTMPKGFGRGAIAPSSGSRSQAKGCGCGWRSPTSARVPCRRTCFHPYFPGDDSAVHNGPHPGEWETSPDGLP LALADAGKAVDWWQGATHPDAGRLTSSRDNLIND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12074; Mature: 12074
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHRSGSSMTMPKGFGRGAIAPSSGSRSQAKGCGCGWRSPTSARVPCRRTCFHPYFPGDD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SAVHNGPHPGEWETSPDGLPLALADAGKAVDWWQGATHPDAGRLTSSRDNLIND CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLHRSGSSMTMPKGFGRGAIAPSSGSRSQAKGCGCGWRSPTSARVPCRRTCFHPYFPGDD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SAVHNGPHPGEWETSPDGLPLALADAGKAVDWWQGATHPDAGRLTSSRDNLIND CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA