Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87198798

Identifier: 87198798

GI number: 87198798

Start: 823625

End: 824614

Strand: Reverse

Name: 87198798

Synonym: Saro_0775

Alternate gene names: NA

Gene position: 824614-823625 (Counterclockwise)

Preceding gene: 87198799

Following gene: 87198797

Centisome position: 23.15

GC content: 64.95

Gene sequence:

>990_bases
GTGTCCTCAACCAACAGCATACTCGCCGCCGGCCTCGCTTTGCTCGCTCCTGTCAGCGCCTTCGCCGCCGATGGTCCGCC
CGATGGCTCGACGCCCCAGCAGAAGGCGGCGATTGCCAAGGACCCGGCCTATCGGAAGCAGGACCTCGTCCTCACCAACC
TGCCGCGCAGCAAGGCCGCGCCCAGGAACCTGTTCAACGGCCGCGACCTGACCGGATGGGACAGCTGGCTCGGCGTGACC
GTGCCGGCCACGACCTATGGCACGCCCAGCAGCGCGCCGATCGGACTGAACCACGACACCTACGGCGTGTTCAAGGTGGT
CGAGCAGGACGGTGCCCCAGCGATCTATTCGAGTGGCAAGCTGTTCGGCGGGCTGCTGACGAAGCAGTCCCACCGCAACT
ACCACCTCCACGTCGAATACAAGTGGGGCGCGAACACCTGGACGCCGATGCCGCGCAACAACGGCGTGCTCTATCACTCG
CACGGCGCCTATGGTGCGTTCTTCGGCACGTGGATGAGCGCGATCGAGTTCGAGGTGGTGCCGCATTCCGTCGGCATGCT
GCTGACGGTGGGCGATTCCAGGGGCAAGCCGTCGTTCGAGACGGTCGACTGGCGGGTCGGGGCGACGGTGCCGGTCGCCA
ATGATCCGTTGCTTCCCTATCCCAGCCGCCGTTACTTTCATGGCGGGCTACCCTCGCAGTTGACCTTCCCGACGTGGAAT
GTCGATGCCGGTACGGACGCGGAAAAGCCGTTGGGCGAGTGGAATTCGCTCGACCTCTATGTTTTTGGCGACAAGTCGAT
CCACGTGGTCAACGGCGTGCCGGTGATGGCCGCGACCAACCTTACCACGAGGGATGCCAAGGGTCGGACGATCCCGTTGA
CCGCGGGCAAGATCCAGCTGCAGTCGGAAGGGGCGGAGACCTACTTCCGTGCGATCACGATCGAGCCGATCCGCCGCCTA
CCGACCATCACCGAGCGAAAGCCGGGCTGA

Upstream 100 bases:

>100_bases
AGGCGGACGCGGCGCTGATCGCCTTAACGGCATCGCCCTTCGATCTGGCCGAGAGCAGCTCGGCCCACTGATTTCCTGCC
CTTTGCTGGAGTTTCCCCTA

Downstream 100 bases:

>100_bases
TCCCAAAGGAGCAGACAATCATGGCAGAGACGGTTTTCGAGCAGGTGACAGGCGAACAGGACCTGCTGGATGTTGGCGAG
TTTCGCGCCGCGGCCGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSSTNSILAAGLALLAPVSAFAADGPPDGSTPQQKAAIAKDPAYRKQDLVLTNLPRSKAAPRNLFNGRDLTGWDSWLGVT
VPATTYGTPSSAPIGLNHDTYGVFKVVEQDGAPAIYSSGKLFGGLLTKQSHRNYHLHVEYKWGANTWTPMPRNNGVLYHS
HGAYGAFFGTWMSAIEFEVVPHSVGMLLTVGDSRGKPSFETVDWRVGATVPVANDPLLPYPSRRYFHGGLPSQLTFPTWN
VDAGTDAEKPLGEWNSLDLYVFGDKSIHVVNGVPVMAATNLTTRDAKGRTIPLTAGKIQLQSEGAETYFRAITIEPIRRL
PTITERKPG

Sequences:

>Translated_329_residues
MSSTNSILAAGLALLAPVSAFAADGPPDGSTPQQKAAIAKDPAYRKQDLVLTNLPRSKAAPRNLFNGRDLTGWDSWLGVT
VPATTYGTPSSAPIGLNHDTYGVFKVVEQDGAPAIYSSGKLFGGLLTKQSHRNYHLHVEYKWGANTWTPMPRNNGVLYHS
HGAYGAFFGTWMSAIEFEVVPHSVGMLLTVGDSRGKPSFETVDWRVGATVPVANDPLLPYPSRRYFHGGLPSQLTFPTWN
VDAGTDAEKPLGEWNSLDLYVFGDKSIHVVNGVPVMAATNLTTRDAKGRTIPLTAGKIQLQSEGAETYFRAITIEPIRRL
PTITERKPG
>Mature_328_residues
SSTNSILAAGLALLAPVSAFAADGPPDGSTPQQKAAIAKDPAYRKQDLVLTNLPRSKAAPRNLFNGRDLTGWDSWLGVTV
PATTYGTPSSAPIGLNHDTYGVFKVVEQDGAPAIYSSGKLFGGLLTKQSHRNYHLHVEYKWGANTWTPMPRNNGVLYHSH
GAYGAFFGTWMSAIEFEVVPHSVGMLLTVGDSRGKPSFETVDWRVGATVPVANDPLLPYPSRRYFHGGLPSQLTFPTWNV
DAGTDAEKPLGEWNSLDLYVFGDKSIHVVNGVPVMAATNLTTRDAKGRTIPLTAGKIQLQSEGAETYFRAITIEPIRRLP
TITERKPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35618; Mature: 35486

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTNSILAAGLALLAPVSAFAADGPPDGSTPQQKAAIAKDPAYRKQDLVLTNLPRSKAA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCC
PRNLFNGRDLTGWDSWLGVTVPATTYGTPSSAPIGLNHDTYGVFKVVEQDGAPAIYSSGK
CCHHCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCC
LFGGLLTKQSHRNYHLHVEYKWGANTWTPMPRNNGVLYHSHGAYGAFFGTWMSAIEFEVV
EEEHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEEEE
PHSVGMLLTVGDSRGKPSFETVDWRVGATVPVANDPLLPYPSRRYFHGGLPSQLTFPTWN
CCCCEEEEEECCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCEECCCCCCCEECCEEC
VDAGTDAEKPLGEWNSLDLYVFGDKSIHVVNGVPVMAATNLTTRDAKGRTIPLTAGKIQL
CCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCEECCCCCCEEEEECCEEEE
QSEGAETYFRAITIEPIRRLPTITERKPG
ECCCCCEEEEEEEECHHHHCCCCCCCCCC
>Mature Secondary Structure 
SSTNSILAAGLALLAPVSAFAADGPPDGSTPQQKAAIAKDPAYRKQDLVLTNLPRSKAA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCC
PRNLFNGRDLTGWDSWLGVTVPATTYGTPSSAPIGLNHDTYGVFKVVEQDGAPAIYSSGK
CCHHCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCC
LFGGLLTKQSHRNYHLHVEYKWGANTWTPMPRNNGVLYHSHGAYGAFFGTWMSAIEFEVV
EEEHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEEEE
PHSVGMLLTVGDSRGKPSFETVDWRVGATVPVANDPLLPYPSRRYFHGGLPSQLTFPTWN
CCCCEEEEEECCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCEECCCCCCCEECCEEC
VDAGTDAEKPLGEWNSLDLYVFGDKSIHVVNGVPVMAATNLTTRDAKGRTIPLTAGKIQL
CCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCEECCCCCCEEEEECCEEEE
QSEGAETYFRAITIEPIRRLPTITERKPG
ECCCCCEEEEEEEECHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA