| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87198798
Identifier: 87198798
GI number: 87198798
Start: 823625
End: 824614
Strand: Reverse
Name: 87198798
Synonym: Saro_0775
Alternate gene names: NA
Gene position: 824614-823625 (Counterclockwise)
Preceding gene: 87198799
Following gene: 87198797
Centisome position: 23.15
GC content: 64.95
Gene sequence:
>990_bases GTGTCCTCAACCAACAGCATACTCGCCGCCGGCCTCGCTTTGCTCGCTCCTGTCAGCGCCTTCGCCGCCGATGGTCCGCC CGATGGCTCGACGCCCCAGCAGAAGGCGGCGATTGCCAAGGACCCGGCCTATCGGAAGCAGGACCTCGTCCTCACCAACC TGCCGCGCAGCAAGGCCGCGCCCAGGAACCTGTTCAACGGCCGCGACCTGACCGGATGGGACAGCTGGCTCGGCGTGACC GTGCCGGCCACGACCTATGGCACGCCCAGCAGCGCGCCGATCGGACTGAACCACGACACCTACGGCGTGTTCAAGGTGGT CGAGCAGGACGGTGCCCCAGCGATCTATTCGAGTGGCAAGCTGTTCGGCGGGCTGCTGACGAAGCAGTCCCACCGCAACT ACCACCTCCACGTCGAATACAAGTGGGGCGCGAACACCTGGACGCCGATGCCGCGCAACAACGGCGTGCTCTATCACTCG CACGGCGCCTATGGTGCGTTCTTCGGCACGTGGATGAGCGCGATCGAGTTCGAGGTGGTGCCGCATTCCGTCGGCATGCT GCTGACGGTGGGCGATTCCAGGGGCAAGCCGTCGTTCGAGACGGTCGACTGGCGGGTCGGGGCGACGGTGCCGGTCGCCA ATGATCCGTTGCTTCCCTATCCCAGCCGCCGTTACTTTCATGGCGGGCTACCCTCGCAGTTGACCTTCCCGACGTGGAAT GTCGATGCCGGTACGGACGCGGAAAAGCCGTTGGGCGAGTGGAATTCGCTCGACCTCTATGTTTTTGGCGACAAGTCGAT CCACGTGGTCAACGGCGTGCCGGTGATGGCCGCGACCAACCTTACCACGAGGGATGCCAAGGGTCGGACGATCCCGTTGA CCGCGGGCAAGATCCAGCTGCAGTCGGAAGGGGCGGAGACCTACTTCCGTGCGATCACGATCGAGCCGATCCGCCGCCTA CCGACCATCACCGAGCGAAAGCCGGGCTGA
Upstream 100 bases:
>100_bases AGGCGGACGCGGCGCTGATCGCCTTAACGGCATCGCCCTTCGATCTGGCCGAGAGCAGCTCGGCCCACTGATTTCCTGCC CTTTGCTGGAGTTTCCCCTA
Downstream 100 bases:
>100_bases TCCCAAAGGAGCAGACAATCATGGCAGAGACGGTTTTCGAGCAGGTGACAGGCGAACAGGACCTGCTGGATGTTGGCGAG TTTCGCGCCGCGGCCGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSSTNSILAAGLALLAPVSAFAADGPPDGSTPQQKAAIAKDPAYRKQDLVLTNLPRSKAAPRNLFNGRDLTGWDSWLGVT VPATTYGTPSSAPIGLNHDTYGVFKVVEQDGAPAIYSSGKLFGGLLTKQSHRNYHLHVEYKWGANTWTPMPRNNGVLYHS HGAYGAFFGTWMSAIEFEVVPHSVGMLLTVGDSRGKPSFETVDWRVGATVPVANDPLLPYPSRRYFHGGLPSQLTFPTWN VDAGTDAEKPLGEWNSLDLYVFGDKSIHVVNGVPVMAATNLTTRDAKGRTIPLTAGKIQLQSEGAETYFRAITIEPIRRL PTITERKPG
Sequences:
>Translated_329_residues MSSTNSILAAGLALLAPVSAFAADGPPDGSTPQQKAAIAKDPAYRKQDLVLTNLPRSKAAPRNLFNGRDLTGWDSWLGVT VPATTYGTPSSAPIGLNHDTYGVFKVVEQDGAPAIYSSGKLFGGLLTKQSHRNYHLHVEYKWGANTWTPMPRNNGVLYHS HGAYGAFFGTWMSAIEFEVVPHSVGMLLTVGDSRGKPSFETVDWRVGATVPVANDPLLPYPSRRYFHGGLPSQLTFPTWN VDAGTDAEKPLGEWNSLDLYVFGDKSIHVVNGVPVMAATNLTTRDAKGRTIPLTAGKIQLQSEGAETYFRAITIEPIRRL PTITERKPG >Mature_328_residues SSTNSILAAGLALLAPVSAFAADGPPDGSTPQQKAAIAKDPAYRKQDLVLTNLPRSKAAPRNLFNGRDLTGWDSWLGVTV PATTYGTPSSAPIGLNHDTYGVFKVVEQDGAPAIYSSGKLFGGLLTKQSHRNYHLHVEYKWGANTWTPMPRNNGVLYHSH GAYGAFFGTWMSAIEFEVVPHSVGMLLTVGDSRGKPSFETVDWRVGATVPVANDPLLPYPSRRYFHGGLPSQLTFPTWNV DAGTDAEKPLGEWNSLDLYVFGDKSIHVVNGVPVMAATNLTTRDAKGRTIPLTAGKIQLQSEGAETYFRAITIEPIRRLP TITERKPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35618; Mature: 35486
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTNSILAAGLALLAPVSAFAADGPPDGSTPQQKAAIAKDPAYRKQDLVLTNLPRSKAA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCC PRNLFNGRDLTGWDSWLGVTVPATTYGTPSSAPIGLNHDTYGVFKVVEQDGAPAIYSSGK CCHHCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCC LFGGLLTKQSHRNYHLHVEYKWGANTWTPMPRNNGVLYHSHGAYGAFFGTWMSAIEFEVV EEEHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEEEE PHSVGMLLTVGDSRGKPSFETVDWRVGATVPVANDPLLPYPSRRYFHGGLPSQLTFPTWN CCCCEEEEEECCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCEECCCCCCCEECCEEC VDAGTDAEKPLGEWNSLDLYVFGDKSIHVVNGVPVMAATNLTTRDAKGRTIPLTAGKIQL CCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCEECCCCCCEEEEECCEEEE QSEGAETYFRAITIEPIRRLPTITERKPG ECCCCCEEEEEEEECHHHHCCCCCCCCCC >Mature Secondary Structure SSTNSILAAGLALLAPVSAFAADGPPDGSTPQQKAAIAKDPAYRKQDLVLTNLPRSKAA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCC PRNLFNGRDLTGWDSWLGVTVPATTYGTPSSAPIGLNHDTYGVFKVVEQDGAPAIYSSGK CCHHCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCC LFGGLLTKQSHRNYHLHVEYKWGANTWTPMPRNNGVLYHSHGAYGAFFGTWMSAIEFEVV EEEHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEEEE PHSVGMLLTVGDSRGKPSFETVDWRVGATVPVANDPLLPYPSRRYFHGGLPSQLTFPTWN CCCCEEEEEECCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCEECCCCCCCEECCEEC VDAGTDAEKPLGEWNSLDLYVFGDKSIHVVNGVPVMAATNLTTRDAKGRTIPLTAGKIQL CCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCEECCCCCCEEEEECCEEEE QSEGAETYFRAITIEPIRRLPTITERKPG ECCCCCEEEEEEEECHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA